RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 NXNQ6DKJ4 435 aa18.37■□□□□ 0.53
GNE-201ENST00000377902 PLPPR4Q7Z2D5 763 aa18.37■□□□□ 0.53
GNE-201ENST00000377902 ZSCAN18Q8TBC5 510 aaPredicted RBP18.37■□□□□ 0.53
GNE-201ENST00000377902 URGCPQ8TCY9 931 aa18.37■□□□□ 0.53
GNE-201ENST00000377902 C18orf25Q96B23 403 aaPredicted RBP18.37■□□□□ 0.53
GNE-201ENST00000377902 PHF12Q96QT6 1004 aa18.37■□□□□ 0.53
GNE-201ENST00000377902 ZDHHC2Q9UIJ5 367 aa18.37■□□□□ 0.53
GNE-201ENST00000377902 RGSL1A5PLK6 1076 aa18.37■□□□□ 0.53
GNE-201ENST00000377902 ARSAP15289 507 aa18.37■□□□□ 0.53
GNE-201ENST00000377902 DESP17661 470 aa18.37■□□□□ 0.53
GNE-201ENST00000377902 PRDX6P30041 224 aa18.37■□□□□ 0.53
GNE-201ENST00000377902 AVPR1AP37288 418 aa18.37■□□□□ 0.53
GNE-201ENST00000377902 GARSP41250 739 aaKnown RBP18.37■□□□□ 0.53
GNE-201ENST00000377902 ADGRE1Q14246 886 aa18.37■□□□□ 0.53
GNE-201ENST00000377902 PIGGQ5H8A4 983 aa18.37■□□□□ 0.53
GNE-201ENST00000377902 ZNF618Q5T7W0 954 aa18.37■□□□□ 0.53
GNE-201ENST00000377902 FAM219BQ5XKK7 198 aa18.37■□□□□ 0.53
GNE-201ENST00000377902 OLFML2BQ68BL8 750 aa18.37■□□□□ 0.53
GNE-201ENST00000377902 POTEAQ6S8J7 498 aa18.37■□□□□ 0.53
GNE-201ENST00000377902 KBTBD7Q8WVZ9 684 aa18.37■□□□□ 0.53
GNE-201ENST00000377902 FERMT1Q9BQL6 677 aa18.37■□□□□ 0.53
GNE-201ENST00000377902 TUBGCP4Q9UGJ1 667 aa18.37■□□□□ 0.53
GNE-201ENST00000377902 PHF24Q9UPV7 400 aa18.37■□□□□ 0.53
GNE-201ENST00000377902 THRAP10827 490 aa18.37■□□□□ 0.53
GNE-201ENST00000377902 INSRRP14616 1297 aa18.37■□□□□ 0.53
GNE-201ENST00000377902 NELFEP18615 380 aaKnown RBP18.37■□□□□ 0.53
GNE-201ENST00000377902 ACAT1P24752 427 aaKnown RBP18.37■□□□□ 0.53
GNE-201ENST00000377902 SERPINB8P50452 374 aa18.37■□□□□ 0.53
GNE-201ENST00000377902 LIMK2P53671 638 aa18.37■□□□□ 0.53
GNE-201ENST00000377902 IFRD2Q12894 506 aaPredicted RBP18.37■□□□□ 0.53
GNE-201ENST00000377902 MAP7Q14244 749 aa18.37■□□□□ 0.53
GNE-201ENST00000377902 ARL13AQ5H913 290 aaPredicted RBP18.37■□□□□ 0.53
GNE-201ENST00000377902 BNC2Q6ZN30 1099 aaPredicted RBP18.37■□□□□ 0.53
GNE-201ENST00000377902 SPATA6LQ8N4H0 392 aa18.37■□□□□ 0.53
GNE-201ENST00000377902 FAM149B1Q96BN6 582 aa18.37■□□□□ 0.53
GNE-201ENST00000377902 NPAS2Q99743 824 aa18.37■□□□□ 0.53
GNE-201ENST00000377902 FZD10Q9ULW2 581 aa18.37■□□□□ 0.53
GNE-201ENST00000377902 ZCWPW2A0A1B0GU75 182 aa18.36■□□□□ 0.53
GNE-201ENST00000377902 MATN2O00339 956 aa18.36■□□□□ 0.53
GNE-201ENST00000377902 MAGEA12P43365 314 aa18.36■□□□□ 0.53
GNE-201ENST00000377902 GRIA4P48058 902 aa18.36■□□□□ 0.53
GNE-201ENST00000377902 CYLC2Q14093 348 aaPredicted RBP18.36■□□□□ 0.53
GNE-201ENST00000377902 DEFB106AQ8N104 65 aa18.36■□□□□ 0.53
GNE-201ENST00000377902 DNAAF3Q8N9W5 541 aa18.36■□□□□ 0.53
GNE-201ENST00000377902 SPATC1LQ9H0A9 340 aa18.36■□□□□ 0.53
GNE-201ENST00000377902 ILKAPQ9H0C8 392 aaPredicted RBP18.36■□□□□ 0.53
GNE-201ENST00000377902 VPS33BQ9H267 617 aa18.36■□□□□ 0.53
GNE-201ENST00000377902 CHRAC1Q9NRG0 131 aa18.36■□□□□ 0.53
GNE-201ENST00000377902 UBP1Q9NZI7 540 aa18.36■□□□□ 0.53
GNE-201ENST00000377902 SLC39A10Q9ULF5 831 aa18.36■□□□□ 0.53
GNE-201ENST00000377902 ZNF487B1APH4 448 aa18.36■□□□□ 0.53
GNE-201ENST00000377902 TMEM233B4DJY2 109 aa18.36■□□□□ 0.53
GNE-201ENST00000377902 PHGDHO43175 533 aaKnown RBP18.36■□□□□ 0.53
GNE-201ENST00000377902 GRID2O43424 1007 aa18.36■□□□□ 0.53
GNE-201ENST00000377902 PIGNO95427 931 aa18.36■□□□□ 0.53
GNE-201ENST00000377902 SBK3P0C264 359 aa18.36■□□□□ 0.53
GNE-201ENST00000377902 SPRP35270 261 aaPredicted RBP18.36■□□□□ 0.53
GNE-201ENST00000377902 RGS2P41220 211 aa18.36■□□□□ 0.53
GNE-201ENST00000377902 NUMBP49757 651 aa18.36■□□□□ 0.53
GNE-201ENST00000377902 NAGLUP54802 743 aa18.36■□□□□ 0.53
GNE-201ENST00000377902 TNFAIP2Q03169 654 aa18.36■□□□□ 0.53
GNE-201ENST00000377902 NRF1Q16656 503 aa18.36■□□□□ 0.53
GNE-201ENST00000377902 RARS2Q5T160 578 aaKnown RBP18.36■□□□□ 0.53
GNE-201ENST00000377902 SLC26A9Q7LBE3 791 aa18.36■□□□□ 0.53
GNE-201ENST00000377902 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.36■□□□□ 0.53
GNE-201ENST00000377902 DTNBP1Q96EV8 351 aa18.36■□□□□ 0.53
GNE-201ENST00000377902 TMA16Q96EY4 203 aaKnown RBP18.36■□□□□ 0.53
GNE-201ENST00000377902 GJD2Q9UKL4 321 aa18.36■□□□□ 0.53
GNE-201ENST00000377902 MCM3APO60318 1980 aa18.35■□□□□ 0.53
GNE-201ENST00000377902 TFEBP19484 476 aa18.35■□□□□ 0.53
GNE-201ENST00000377902 SULT1E1P49888 294 aa18.35■□□□□ 0.53
GNE-201ENST00000377902 RABGGTBP53611 331 aa18.35■□□□□ 0.53
GNE-201ENST00000377902 DCAF6Q58WW2 860 aa18.35■□□□□ 0.53
GNE-201ENST00000377902 AMIGO2Q86SJ2 522 aa18.35■□□□□ 0.53
GNE-201ENST00000377902 CLEC14AQ86T13 490 aa18.35■□□□□ 0.53
GNE-201ENST00000377902 RNF139Q8WU17 664 aa18.35■□□□□ 0.53
GNE-201ENST00000377902 SENP6Q9GZR1 1112 aaPredicted RBP18.35■□□□□ 0.53
GNE-201ENST00000377902 RBM38Q9H0Z9 239 aaKnown RBP18.35■□□□□ 0.53
GNE-201ENST00000377902 SEMA6AQ9H2E6 1030 aa18.35■□□□□ 0.53
GNE-201ENST00000377902 TASP1Q9H6P5 420 aa18.35■□□□□ 0.53
GNE-201ENST00000377902 SUDS3Q9H7L9 328 aaPredicted RBP18.35■□□□□ 0.53
GNE-201ENST00000377902 IARS2Q9NSE4 1012 aaKnown RBP18.35■□□□□ 0.53
GNE-201ENST00000377902 OXSMQ9NWU1 459 aa18.35■□□□□ 0.53
GNE-201ENST00000377902 KLHL8Q9P2G9 620 aaPredicted RBP18.35■□□□□ 0.53
GNE-201ENST00000377902 VANGL2Q9ULK5 521 aa18.35■□□□□ 0.53
GNE-201ENST00000377902 GINS2Q9Y248 185 aa18.35■□□□□ 0.53
GNE-201ENST00000377902 HEMK1Q9Y5R4 338 aaPredicted RBP18.35■□□□□ 0.53
GNE-201ENST00000377902 FAM72CH0Y354 149 aa18.35■□□□□ 0.53
GNE-201ENST00000377902 HBP1O60381 514 aa18.35■□□□□ 0.53
GNE-201ENST00000377902 NME3Q13232 169 aa18.35■□□□□ 0.53
GNE-201ENST00000377902 SPANXN3Q5MJ09 141 aa18.35■□□□□ 0.53
GNE-201ENST00000377902 FAM72AQ5TYM5 149 aa18.35■□□□□ 0.53
GNE-201ENST00000377902 SEL1L3Q68CR1 1132 aa18.35■□□□□ 0.53
GNE-201ENST00000377902 FAM72DQ6L9T8 149 aa18.35■□□□□ 0.53
GNE-201ENST00000377902 B3GNT6Q6ZMB0 384 aa18.35■□□□□ 0.53
GNE-201ENST00000377902 FAM72BQ86X60 149 aa18.35■□□□□ 0.53
GNE-201ENST00000377902 TICAM1Q8IUC6 712 aa18.35■□□□□ 0.53
GNE-201ENST00000377902 RIOX2Q8IUF8 465 aa18.35■□□□□ 0.53
GNE-201ENST00000377902 TMEM151AQ8N4L1 468 aa18.35■□□□□ 0.53
GNE-201ENST00000377902 LENG1Q96BZ8 264 aaPredicted RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms