RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 SYPP08247 313 aa17.28■□□□□ 0.36
HMGN4-201ENST00000377575 DESP17661 470 aa17.28■□□□□ 0.36
HMGN4-201ENST00000377575 GPD1P21695 349 aa17.28■□□□□ 0.36
HMGN4-201ENST00000377575 NUMBP49757 651 aa17.28■□□□□ 0.36
HMGN4-201ENST00000377575 ELAVL3Q14576 367 aaKnown RBP17.28■□□□□ 0.36
HMGN4-201ENST00000377575 CST6Q15828 149 aa17.28■□□□□ 0.36
HMGN4-201ENST00000377575 ALFQ53S48 1182 aa17.28■□□□□ 0.36
HMGN4-201ENST00000377575 PPM1JQ5JR12 505 aa17.28■□□□□ 0.36
HMGN4-201ENST00000377575 IRF2BP2Q7Z5L9 587 aa17.28■□□□□ 0.36
HMGN4-201ENST00000377575 LUZP1Q86V48 1076 aa17.28■□□□□ 0.36
HMGN4-201ENST00000377575 GANCQ8TET4 914 aa17.28■□□□□ 0.36
HMGN4-201ENST00000377575 FAM172AQ8WUF8 416 aa17.28■□□□□ 0.36
HMGN4-201ENST00000377575 DNASE2BQ8WZ79 361 aa17.28■□□□□ 0.36
HMGN4-201ENST00000377575 ALG14Q96F25 216 aa17.28■□□□□ 0.36
HMGN4-201ENST00000377575 C2orf49Q9BVC5 232 aaPredicted RBP17.28■□□□□ 0.36
HMGN4-201ENST00000377575 ZYG11BQ9C0D3 744 aa17.28■□□□□ 0.36
HMGN4-201ENST00000377575 SGK2Q9HBY8 427 aa17.28■□□□□ 0.36
HMGN4-201ENST00000377575 CAPN10Q9HC96 672 aa17.28■□□□□ 0.36
HMGN4-201ENST00000377575 TMPRSS4Q9NRS4 437 aa17.28■□□□□ 0.36
HMGN4-201ENST00000377575 MED19A0JLT2 244 aaPredicted RBP17.27■□□□□ 0.36
HMGN4-201ENST00000377575 SIGLEC16A6NMB1 481 aa17.27■□□□□ 0.36
HMGN4-201ENST00000377575 METTL12A8MUP2 240 aa17.27■□□□□ 0.36
HMGN4-201ENST00000377575 SRGAP2O75044 1071 aa17.27■□□□□ 0.36
HMGN4-201ENST00000377575 GJB6O95452 261 aa17.27■□□□□ 0.36
HMGN4-201ENST00000377575 ADH1BP00325 375 aa17.27■□□□□ 0.36
HMGN4-201ENST00000377575 TNFAIP3P21580 790 aa17.27■□□□□ 0.36
HMGN4-201ENST00000377575 OR1E1P30953 314 aa17.27■□□□□ 0.36
HMGN4-201ENST00000377575 ACSL1P33121 698 aa17.27■□□□□ 0.36
HMGN4-201ENST00000377575 MAPK8P45983 427 aa17.27■□□□□ 0.36
HMGN4-201ENST00000377575 NRG1Q02297 640 aaPredicted RBP17.27■□□□□ 0.36
HMGN4-201ENST00000377575 SKOR2Q2VWA4 1001 aaPredicted RBP17.27■□□□□ 0.36
HMGN4-201ENST00000377575 SFMBT2Q5VUG0 894 aa17.27■□□□□ 0.36
HMGN4-201ENST00000377575 ACAD10Q6JQN1 1059 aa17.27■□□□□ 0.36
HMGN4-201ENST00000377575 ZNF783Q6ZMS7 281 aa17.27■□□□□ 0.36
HMGN4-201ENST00000377575 TFAP2DQ7Z6R9 452 aa17.27■□□□□ 0.36
HMGN4-201ENST00000377575 MMAAQ8IVH4 418 aaKnown RBP17.27■□□□□ 0.36
HMGN4-201ENST00000377575 OR52K2Q8NGK3 314 aa17.27■□□□□ 0.36
HMGN4-201ENST00000377575 SNX19Q92543 992 aa17.27■□□□□ 0.36
HMGN4-201ENST00000377575 NAP1L5Q96NT1 182 aaPredicted RBP17.27■□□□□ 0.36
HMGN4-201ENST00000377575 EDEM3Q9BZQ6 932 aa17.27■□□□□ 0.36
HMGN4-201ENST00000377575 MPP6Q9NZW5 540 aa17.27■□□□□ 0.36
HMGN4-201ENST00000377575 PPARGC1AQ9UBK2 798 aaKnown RBP17.27■□□□□ 0.36
HMGN4-201ENST00000377575 OR51B4Q9Y5P0 310 aa17.27■□□□□ 0.36
HMGN4-201ENST00000377575 CHD5Q8TDI0 1954 aa17.26■□□□□ 0.35
HMGN4-201ENST00000377575 A0A1B0GTW7 788 aa17.26■□□□□ 0.35
HMGN4-201ENST00000377575 CDX4O14627 284 aaPredicted RBP17.26■□□□□ 0.35
HMGN4-201ENST00000377575 TM4SF5O14894 197 aa17.26■□□□□ 0.35
HMGN4-201ENST00000377575 MID1O15344 667 aa17.26■□□□□ 0.35
HMGN4-201ENST00000377575 ATP9BO43861 1147 aa17.26■□□□□ 0.35
HMGN4-201ENST00000377575 MAOBP27338 520 aa17.26■□□□□ 0.35
HMGN4-201ENST00000377575 RFC1P35251 1148 aaPredicted RBP17.26■□□□□ 0.35
HMGN4-201ENST00000377575 ADRA1BP35368 520 aa17.26■□□□□ 0.35
HMGN4-201ENST00000377575 PSMD8P48556 350 aa17.26■□□□□ 0.35
HMGN4-201ENST00000377575 FANCCQ00597 558 aa17.26■□□□□ 0.35
HMGN4-201ENST00000377575 NR1I3Q14994 352 aa17.26■□□□□ 0.35
HMGN4-201ENST00000377575 ZSCAN23Q3MJ62 389 aa17.26■□□□□ 0.35
HMGN4-201ENST00000377575 ACCSLQ4AC99 568 aa17.26■□□□□ 0.35
HMGN4-201ENST00000377575 FIGNQ5HY92 759 aa17.26■□□□□ 0.35
HMGN4-201ENST00000377575 DSG4Q86SJ6 1040 aa17.26■□□□□ 0.35
HMGN4-201ENST00000377575 MCOLN2Q8IZK6 566 aa17.26■□□□□ 0.35
HMGN4-201ENST00000377575 STK40Q8N2I9 435 aa17.26■□□□□ 0.35
HMGN4-201ENST00000377575 ZCCHC9Q8N567 271 aaKnown RBP17.26■□□□□ 0.35
HMGN4-201ENST00000377575 DCAF4L2Q8NA75 395 aa17.26■□□□□ 0.35
HMGN4-201ENST00000377575 CENPIQ92674 756 aaPredicted RBP17.26■□□□□ 0.35
HMGN4-201ENST00000377575 PTPRN2Q92932 1015 aa17.26■□□□□ 0.35
HMGN4-201ENST00000377575 MCEEQ96PE7 176 aa17.26■□□□□ 0.35
HMGN4-201ENST00000377575 OMDQ99983 421 aa17.26■□□□□ 0.35
HMGN4-201ENST00000377575 SYT11Q9BT88 431 aa17.26■□□□□ 0.35
HMGN4-201ENST00000377575 GTPBP2Q9BX10 602 aaKnown RBP17.26■□□□□ 0.35
HMGN4-201ENST00000377575 TTYH3Q9C0H2 523 aa17.26■□□□□ 0.35
HMGN4-201ENST00000377575 MIR1-1HGQ9H1L0 117 aa17.26■□□□□ 0.35
HMGN4-201ENST00000377575 C6orf106Q9H6K1 298 aaPredicted RBP17.26■□□□□ 0.35
HMGN4-201ENST00000377575 FBXL12Q9NXK8 326 aa17.26■□□□□ 0.35
HMGN4-201ENST00000377575 AIPL1Q9NZN9 384 aa17.26■□□□□ 0.35
HMGN4-201ENST00000377575 OR12D3Q9UGF7 316 aa17.26■□□□□ 0.35
HMGN4-201ENST00000377575 FZD4Q9ULV1 537 aa17.26■□□□□ 0.35
HMGN4-201ENST00000377575 HS3ST2Q9Y278 367 aa17.26■□□□□ 0.35
HMGN4-201ENST00000377575 CNOT1A5YKK6 2376 aaKnown RBP17.26■□□□□ 0.35
HMGN4-201ENST00000377575 TP53BP1Q12888 1972 aaPredicted RBP17.26■□□□□ 0.35
HMGN4-201ENST00000377575 SPTBN2O15020 2390 aa17.25■□□□□ 0.35
HMGN4-201ENST00000377575 A0A1W2PP55 124 aa17.25■□□□□ 0.35
HMGN4-201ENST00000377575 ILVBLA1L0T0 632 aa17.25■□□□□ 0.35
HMGN4-201ENST00000377575 ARHGAP33O14559 1287 aa17.25■□□□□ 0.35
HMGN4-201ENST00000377575 ALOX15BO15296 676 aa17.25■□□□□ 0.35
HMGN4-201ENST00000377575 IL1BP01584 269 aa17.25■□□□□ 0.35
HMGN4-201ENST00000377575 C5AR1P21730 350 aa17.25■□□□□ 0.35
HMGN4-201ENST00000377575 ZNF143P52747 638 aaPredicted RBP17.25■□□□□ 0.35
HMGN4-201ENST00000377575 HDAC4P56524 1084 aa17.25■□□□□ 0.35
HMGN4-201ENST00000377575 UAP1L1Q3KQV9 507 aa17.25■□□□□ 0.35
HMGN4-201ENST00000377575 SH3PXD2AQ5TCZ1 1133 aa17.25■□□□□ 0.35
HMGN4-201ENST00000377575 DCUN1D2Q6PH85 259 aa17.25■□□□□ 0.35
HMGN4-201ENST00000377575 WDR59Q6PJI9 974 aa17.25■□□□□ 0.35
HMGN4-201ENST00000377575 HDDC3Q8N4P3 179 aa17.25■□□□□ 0.35
HMGN4-201ENST00000377575 SH2D3CQ8N5H7 860 aa17.25■□□□□ 0.35
HMGN4-201ENST00000377575 FRS2Q8WU20 508 aa17.25■□□□□ 0.35
HMGN4-201ENST00000377575 OR8D1Q8WZ84 308 aa17.25■□□□□ 0.35
HMGN4-201ENST00000377575 NTAN1Q96AB6 310 aa17.25■□□□□ 0.35
HMGN4-201ENST00000377575 VCPIP1Q96JH7 1222 aa17.25■□□□□ 0.35
HMGN4-201ENST00000377575 CCDC114Q96M63 670 aa17.25■□□□□ 0.35
HMGN4-201ENST00000377575 PSMB7Q99436 277 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 205.3 ms