RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-225	ENST00000376568	FAM96A	Q9H5X1	160 aa		13.84	□□□□□ -0.19
DDR1-225	ENST00000376568	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	13.84	□□□□□ -0.19
DDR1-225	ENST00000376568	THG1L	Q9NWX6	298 aa	Known RBP	13.84	□□□□□ -0.19
DDR1-225	ENST00000376568	COCH	O43405	550 aa		13.84	□□□□□ -0.19
DDR1-225	ENST00000376568	FAM189A1	O60320	539 aa		13.84	□□□□□ -0.19
DDR1-225	ENST00000376568	CAND2	O75155	1236 aa		13.84	□□□□□ -0.19
DDR1-225	ENST00000376568	TRIM16	O95361	564 aa		13.84	□□□□□ -0.19
DDR1-225	ENST00000376568	ERVK-10	P10266	1014 aa		13.84	□□□□□ -0.19
DDR1-225	ENST00000376568	MGAT3	Q09327	533 aa		13.84	□□□□□ -0.19
DDR1-225	ENST00000376568	CCSAP	Q6IQ19	270 aa	Predicted RBP	13.84	□□□□□ -0.19
DDR1-225	ENST00000376568	DET1	Q7L5Y6	550 aa		13.84	□□□□□ -0.19
DDR1-225	ENST00000376568	PBXIP1	Q96AQ6	731 aa		13.84	□□□□□ -0.19
DDR1-225	ENST00000376568	STAMBPL1	Q96FJ0	436 aa		13.84	□□□□□ -0.19
DDR1-225	ENST00000376568	HMCES	Q96FZ2	354 aa		13.84	□□□□□ -0.19
DDR1-225	ENST00000376568	DUS2	Q9NX74	493 aa	Known RBP	13.84	□□□□□ -0.19
DDR1-225	ENST00000376568	DNAJC16	Q9Y2G8	782 aa		13.84	□□□□□ -0.19
DDR1-225	ENST00000376568		A0A0D9SEW6	157 aa		13.83	□□□□□ -0.2
DDR1-225	ENST00000376568	NDUFS3	O75489	264 aa		13.83	□□□□□ -0.2
DDR1-225	ENST00000376568	GAD2	Q05329	585 aa		13.83	□□□□□ -0.2
DDR1-225	ENST00000376568	USP10	Q14694	798 aa	Known RBP	13.83	□□□□□ -0.2
DDR1-225	ENST00000376568	ARMC12	Q5T9G4	340 aa		13.83	□□□□□ -0.2
DDR1-225	ENST00000376568	DCAF12L1	Q5VU92	463 aa		13.83	□□□□□ -0.2
DDR1-225	ENST00000376568	EGFL8	Q99944	293 aa		13.83	□□□□□ -0.2
DDR1-225	ENST00000376568	MIR1-1HG	Q9H1L0	117 aa		13.83	□□□□□ -0.2
DDR1-225	ENST00000376568	DCTN4	Q9UJW0	460 aa		13.83	□□□□□ -0.2
DDR1-225	ENST00000376568	ANGPTL3	Q9Y5C1	460 aa		13.83	□□□□□ -0.2
DDR1-225	ENST00000376568	SBF1	O95248	1867 aa		13.83	□□□□□ -0.2
DDR1-225	ENST00000376568		J3KR12	359 aa		13.83	□□□□□ -0.2
DDR1-225	ENST00000376568	TRIM24	O15164	1050 aa		13.83	□□□□□ -0.2
DDR1-225	ENST00000376568	MEFV	O15553	781 aa	Predicted RBP	13.83	□□□□□ -0.2
DDR1-225	ENST00000376568	AGT	P01019	485 aa		13.83	□□□□□ -0.2
DDR1-225	ENST00000376568	ZBTB6	Q15916	424 aa		13.83	□□□□□ -0.2
DDR1-225	ENST00000376568	TCTN1	Q2MV58	587 aa		13.83	□□□□□ -0.2
DDR1-225	ENST00000376568	LY6G5C	Q5SRR4	150 aa		13.83	□□□□□ -0.2
DDR1-225	ENST00000376568	C6orf118	Q5T5N4	469 aa		13.83	□□□□□ -0.2
DDR1-225	ENST00000376568	THEMIS2	Q5TEJ8	643 aa		13.83	□□□□□ -0.2
DDR1-225	ENST00000376568	PPIL6	Q8IXY8	311 aa		13.83	□□□□□ -0.2
DDR1-225	ENST00000376568	TSEN2	Q8NCE0	465 aa	Known RBP	13.83	□□□□□ -0.2
DDR1-225	ENST00000376568	GABPB2	Q8TAK5	448 aa	Predicted RBP	13.83	□□□□□ -0.2
DDR1-225	ENST00000376568	FBF1	Q8TES7	1133 aa		13.83	□□□□□ -0.2
DDR1-225	ENST00000376568	SUSD6	Q92537	303 aa		13.83	□□□□□ -0.2
DDR1-225	ENST00000376568	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
DDR1-225	ENST00000376568	PBX4	Q9BYU1	374 aa		13.83	□□□□□ -0.2
DDR1-225	ENST00000376568	TARSL2	A2RTX5	802 aa	Known RBP	13.83	□□□□□ -0.2
DDR1-225	ENST00000376568	ACSL4	O60488	711 aa		13.83	□□□□□ -0.2
DDR1-225	ENST00000376568	HAPLN1	P10915	354 aa	Predicted RBP	13.83	□□□□□ -0.2
DDR1-225	ENST00000376568	ITIH2	P19823	946 aa		13.83	□□□□□ -0.2
DDR1-225	ENST00000376568	CDC25C	P30307	473 aa		13.83	□□□□□ -0.2
DDR1-225	ENST00000376568	CDKN2B	P42772	138 aa		13.83	□□□□□ -0.2
DDR1-225	ENST00000376568	CERCAM	Q5T4B2	595 aa		13.83	□□□□□ -0.2
DDR1-225	ENST00000376568	MRPL10	Q7Z7H8	261 aa	Known RBP	13.83	□□□□□ -0.2
DDR1-225	ENST00000376568	ELMO2	Q96JJ3	720 aa		13.83	□□□□□ -0.2
DDR1-225	ENST00000376568	ADAM7	Q9H2U9	754 aa		13.83	□□□□□ -0.2
DDR1-225	ENST00000376568	CRLS1	Q9UJA2	301 aa		13.83	□□□□□ -0.2
DDR1-225	ENST00000376568	LIAS	O43766	372 aa		13.82	□□□□□ -0.2
DDR1-225	ENST00000376568	EPHX1	P07099	455 aa		13.82	□□□□□ -0.2
DDR1-225	ENST00000376568	HOXD8	P13378	290 aa	Predicted RBP	13.82	□□□□□ -0.2
DDR1-225	ENST00000376568	HSD17B3	P37058	310 aa		13.82	□□□□□ -0.2
DDR1-225	ENST00000376568	RENBP	P51606	427 aa		13.82	□□□□□ -0.2
DDR1-225	ENST00000376568	GUCY1A3	Q02108	690 aa		13.82	□□□□□ -0.2
DDR1-225	ENST00000376568	TNK2	Q07912	1038 aa		13.82	□□□□□ -0.2
DDR1-225	ENST00000376568	BBS7	Q8IWZ6	715 aa		13.82	□□□□□ -0.2
DDR1-225	ENST00000376568	DEFB119	Q8N690	84 aa		13.82	□□□□□ -0.2
DDR1-225	ENST00000376568	NCAN	O14594	1321 aa		13.82	□□□□□ -0.2
DDR1-225	ENST00000376568	COPE	O14579	308 aa		13.82	□□□□□ -0.2
DDR1-225	ENST00000376568	IRAK2	O43187	625 aa		13.82	□□□□□ -0.2
DDR1-225	ENST00000376568	SH3BGRL	O75368	114 aa		13.82	□□□□□ -0.2
DDR1-225	ENST00000376568	MT-CO1	P00395	513 aa		13.82	□□□□□ -0.2
DDR1-225	ENST00000376568	DSC3	Q14574	896 aa		13.82	□□□□□ -0.2
DDR1-225	ENST00000376568	FASTKD3	Q14CZ7	662 aa	Known RBP	13.82	□□□□□ -0.2
DDR1-225	ENST00000376568	GLE1	Q53GS7	698 aa	Known RBP	13.82	□□□□□ -0.2
DDR1-225	ENST00000376568	NDUFAF2	Q8N183	169 aa		13.82	□□□□□ -0.2
DDR1-225	ENST00000376568	SLC39A11	Q8N1S5	342 aa		13.82	□□□□□ -0.2
DDR1-225	ENST00000376568	PPHLN1	Q8NEY8	458 aa	Known RBP	13.82	□□□□□ -0.2
DDR1-225	ENST00000376568	BCAS4	Q8TDM0	211 aa		13.82	□□□□□ -0.2
DDR1-225	ENST00000376568	BTN2A3P	Q96KV6	586 aa		13.82	□□□□□ -0.2
DDR1-225	ENST00000376568	SLC39A8	Q9C0K1	460 aa		13.82	□□□□□ -0.2
DDR1-225	ENST00000376568	DEC1	Q9P2X7	70 aa		13.82	□□□□□ -0.2
DDR1-225	ENST00000376568	CD84	Q9UIB8	345 aa		13.82	□□□□□ -0.2
DDR1-225	ENST00000376568	ATP5D	P30049	168 aa		13.82	□□□□□ -0.2
DDR1-225	ENST00000376568	UBXN2B	Q14CS0	331 aa		13.82	□□□□□ -0.2
DDR1-225	ENST00000376568	ARL8A	Q96BM9	186 aa		13.82	□□□□□ -0.2
DDR1-225	ENST00000376568	VPS39	Q96JC1	886 aa		13.82	□□□□□ -0.2
DDR1-225	ENST00000376568	SLC9A7	Q96T83	725 aa		13.82	□□□□□ -0.2
DDR1-225	ENST00000376568	HERPUD2	Q9BSE4	406 aa		13.82	□□□□□ -0.2
DDR1-225	ENST00000376568	ZFP14	Q9HCL3	533 aa		13.82	□□□□□ -0.2
DDR1-225	ENST00000376568	CYP4F12	Q9HCS2	524 aa		13.82	□□□□□ -0.2
DDR1-225	ENST00000376568	MARCH5	Q9NX47	278 aa		13.82	□□□□□ -0.2
DDR1-225	ENST00000376568	KRT37	O76014	449 aa		13.81	□□□□□ -0.2
DDR1-225	ENST00000376568	GARS	P41250	739 aa	Known RBP	13.81	□□□□□ -0.2
DDR1-225	ENST00000376568	CDK7	P50613	346 aa		13.81	□□□□□ -0.2
DDR1-225	ENST00000376568	EIF3B	P55884	814 aa	Known RBP	13.81	□□□□□ -0.2
DDR1-225	ENST00000376568	ANKRD22	Q5VYY1	191 aa		13.81	□□□□□ -0.2
DDR1-225	ENST00000376568	PAQR9	Q6ZVX9	377 aa		13.81	□□□□□ -0.2
DDR1-225	ENST00000376568	XPO6	Q96QU8	1125 aa	Known RBP	13.81	□□□□□ -0.2
DDR1-225	ENST00000376568	PFDN4	Q9NQP4	134 aa		13.81	□□□□□ -0.2
DDR1-225	ENST00000376568	OGFR	Q9NZT2	677 aa		13.81	□□□□□ -0.2
DDR1-225	ENST00000376568	COL11A1	P12107	1806 aa	Predicted RBP	13.81	□□□□□ -0.2
DDR1-225	ENST00000376568	LINC01553	A4QN01	128 aa		13.81	□□□□□ -0.2
DDR1-225	ENST00000376568	SH3BP5	O60239	455 aa		13.81	□□□□□ -0.2

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