RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 RFPL3O75679 317 aa23.9■■□□□ 1.42
C9orf47-202ENST00000375850 ILKQ13418 452 aa23.9■■□□□ 1.42
C9orf47-202ENST00000375850 CCDC157Q569K6 752 aa23.9■■□□□ 1.42
C9orf47-202ENST00000375850 GATAD2AQ86YP4 633 aa23.9■■□□□ 1.42
C9orf47-202ENST00000375850 FRS2Q8WU20 508 aa23.9■■□□□ 1.42
C9orf47-202ENST00000375850 NXPE2Q96DL1 559 aa23.9■■□□□ 1.42
C9orf47-202ENST00000375850 CYTH4Q9UIA0 394 aa23.9■■□□□ 1.42
C9orf47-202ENST00000375850 APC2O95996 2303 aa23.9■■□□□ 1.42
C9orf47-202ENST00000375850 ADAMTS20P59510 1910 aa23.9■■□□□ 1.42
C9orf47-202ENST00000375850 BAHCC1Q9P281 2608 aa23.9■■□□□ 1.42
C9orf47-202ENST00000375850 ATP9BO43861 1147 aa23.89■■□□□ 1.41
C9orf47-202ENST00000375850 DRD3P35462 400 aa23.89■■□□□ 1.41
C9orf47-202ENST00000375850 STK19P49842 368 aaPredicted RBP23.89■■□□□ 1.41
C9orf47-202ENST00000375850 CCDC15Q0P6D6 951 aa23.89■■□□□ 1.41
C9orf47-202ENST00000375850 SHBQ15464 509 aa23.89■■□□□ 1.41
C9orf47-202ENST00000375850 C6orf118Q5T5N4 469 aa23.89■■□□□ 1.41
C9orf47-202ENST00000375850 CXorf57Q6NSI4 855 aaKnown RBP23.89■■□□□ 1.41
C9orf47-202ENST00000375850 TRIM65Q6PJ69 517 aa23.89■■□□□ 1.41
C9orf47-202ENST00000375850 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.89■■□□□ 1.41
C9orf47-202ENST00000375850 TRIM69Q86WT6 500 aa23.89■■□□□ 1.41
C9orf47-202ENST00000375850 HNRNPLLQ8WVV9 542 aaKnown RBP23.89■■□□□ 1.41
C9orf47-202ENST00000375850 RPRD1AQ96P16 312 aaPredicted RBP23.89■■□□□ 1.41
C9orf47-202ENST00000375850 PCDHGC3Q9UN70 934 aa23.89■■□□□ 1.41
C9orf47-202ENST00000375850 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.88■■□□□ 1.41
C9orf47-202ENST00000375850 FAM149AA5PLN7 773 aa23.88■■□□□ 1.41
C9orf47-202ENST00000375850 PLRG1O43660 514 aaKnown RBP23.88■■□□□ 1.41
C9orf47-202ENST00000375850 JUPP14923 745 aa23.88■■□□□ 1.41
C9orf47-202ENST00000375850 STX17P56962 302 aa23.88■■□□□ 1.41
C9orf47-202ENST00000375850 ZNF177Q13360 481 aaPredicted RBP23.88■■□□□ 1.41
C9orf47-202ENST00000375850 FBXL22Q6P050 247 aa23.88■■□□□ 1.41
C9orf47-202ENST00000375850 DEFB106AQ8N104 65 aa23.88■■□□□ 1.41
C9orf47-202ENST00000375850 PPP1R13BQ96KQ4 1090 aa23.88■■□□□ 1.41
C9orf47-202ENST00000375850 RRN3Q9NYV6 651 aa23.88■■□□□ 1.41
C9orf47-202ENST00000375850 APEX2Q9UBZ4 518 aa23.88■■□□□ 1.41
C9orf47-202ENST00000375850 ITPR1Q14643 2758 aa23.87■■□□□ 1.41
C9orf47-202ENST00000375850 MCF2LO15068 1137 aa23.87■■□□□ 1.41
C9orf47-202ENST00000375850 RNGTTO60942 597 aaKnown RBP23.87■■□□□ 1.41
C9orf47-202ENST00000375850 CLDN11O75508 207 aa23.87■■□□□ 1.41
C9orf47-202ENST00000375850 SETMARQ53H47 684 aaPredicted RBP23.87■■□□□ 1.41
C9orf47-202ENST00000375850 PRAMEF14Q5SWL7 426 aa23.87■■□□□ 1.41
C9orf47-202ENST00000375850 ACBD5Q5T8D3 534 aaPredicted RBP23.87■■□□□ 1.41
C9orf47-202ENST00000375850 SFMBT2Q5VUG0 894 aa23.87■■□□□ 1.41
C9orf47-202ENST00000375850 C11orf57Q6ZUT1 292 aaPredicted RBP23.87■■□□□ 1.41
C9orf47-202ENST00000375850 TSC1Q92574 1164 aa23.87■■□□□ 1.41
C9orf47-202ENST00000375850 CCDC114Q96M63 670 aa23.87■■□□□ 1.41
C9orf47-202ENST00000375850 FEM1AQ9BSK4 669 aa23.87■■□□□ 1.41
C9orf47-202ENST00000375850 PPM1HQ9ULR3 514 aa23.87■■□□□ 1.41
C9orf47-202ENST00000375850 TMEM131Q92545 1883 aa23.87■■□□□ 1.41
C9orf47-202ENST00000375850 GTPBP10A4D1E9 387 aaKnown RBP23.86■■□□□ 1.41
C9orf47-202ENST00000375850 BIN1O00499 593 aa23.86■■□□□ 1.41
C9orf47-202ENST00000375850 ACADVLP49748 655 aa23.86■■□□□ 1.41
C9orf47-202ENST00000375850 PPP2CBP62714 309 aa23.86■■□□□ 1.41
C9orf47-202ENST00000375850 PPP2CAP67775 309 aa23.86■■□□□ 1.41
C9orf47-202ENST00000375850 PITX1P78337 314 aaPredicted RBP23.86■■□□□ 1.41
C9orf47-202ENST00000375850 PTK2Q05397 1052 aa23.86■■□□□ 1.41
C9orf47-202ENST00000375850 AUHQ13825 339 aaKnown RBP23.86■■□□□ 1.41
C9orf47-202ENST00000375850 STAT4Q14765 748 aa23.86■■□□□ 1.41
C9orf47-202ENST00000375850 TAF5Q15542 800 aa23.86■■□□□ 1.41
C9orf47-202ENST00000375850 ACCSLQ4AC99 568 aa23.86■■□□□ 1.41
C9orf47-202ENST00000375850 SOWAHCQ53LP3 525 aaPredicted RBP23.86■■□□□ 1.41
C9orf47-202ENST00000375850 GBP6Q6ZN66 633 aa23.86■■□□□ 1.41
C9orf47-202ENST00000375850 CACTIN-AS1Q8N1I8 211 aa23.86■■□□□ 1.41
C9orf47-202ENST00000375850 EID2Q8N6I1 236 aa23.86■■□□□ 1.41
C9orf47-202ENST00000375850 SHC3Q92529 594 aa23.86■■□□□ 1.41
C9orf47-202ENST00000375850 ALG14Q96F25 216 aa23.86■■□□□ 1.41
C9orf47-202ENST00000375850 CPXM1Q96SM3 734 aa23.86■■□□□ 1.41
C9orf47-202ENST00000375850 PREBQ9HCU5 417 aa23.86■■□□□ 1.41
C9orf47-202ENST00000375850 ARHGAP20Q9P2F6 1191 aa23.86■■□□□ 1.41
C9orf47-202ENST00000375850 VPS28Q9UK41 221 aa23.86■■□□□ 1.41
C9orf47-202ENST00000375850 TBC1D30Q9Y2I9 924 aa23.86■■□□□ 1.41
C9orf47-202ENST00000375850 FARP1Q9Y4F1 1045 aaPredicted RBP23.86■■□□□ 1.41
C9orf47-202ENST00000375850 PRAMEF26H0Y7S4 382 aa23.85■■□□□ 1.41
C9orf47-202ENST00000375850 WNT9AO14904 365 aa23.85■■□□□ 1.41
C9orf47-202ENST00000375850 ZNF18P17022 549 aa23.85■■□□□ 1.41
C9orf47-202ENST00000375850 USP8P40818 1118 aa23.85■■□□□ 1.41
C9orf47-202ENST00000375850 CDH4P55283 916 aa23.85■■□□□ 1.41
C9orf47-202ENST00000375850 KRT83P78385 493 aa23.85■■□□□ 1.41
C9orf47-202ENST00000375850 DLG2Q15700 870 aa23.85■■□□□ 1.41
C9orf47-202ENST00000375850 C5orf22Q49AR2 442 aa23.85■■□□□ 1.41
C9orf47-202ENST00000375850 NEK5Q6P3R8 708 aa23.85■■□□□ 1.41
C9orf47-202ENST00000375850 SLC26A9Q7LBE3 791 aa23.85■■□□□ 1.41
C9orf47-202ENST00000375850 CIR1Q86X95 450 aaPredicted RBP23.85■■□□□ 1.41
C9orf47-202ENST00000375850 MARCH9Q86YJ5 346 aa23.85■■□□□ 1.41
C9orf47-202ENST00000375850 ZDHHC17Q8IUH5 632 aa23.85■■□□□ 1.41
C9orf47-202ENST00000375850 RWDD2AQ9UIY3 292 aa23.85■■□□□ 1.41
C9orf47-202ENST00000375850 PAXBP1Q9Y5B6 917 aa23.85■■□□□ 1.41
C9orf47-202ENST00000375850 PLXNA2O75051 1894 aa23.84■■□□□ 1.41
C9orf47-202ENST00000375850 BECN2A8MW95 431 aa23.84■■□□□ 1.41
C9orf47-202ENST00000375850 RTN2O75298 545 aa23.84■■□□□ 1.41
C9orf47-202ENST00000375850 DAB1O75553 588 aa23.84■■□□□ 1.41
C9orf47-202ENST00000375850 VAV1P15498 845 aa23.84■■□□□ 1.41
C9orf47-202ENST00000375850 NOS2P35228 1153 aa23.84■■□□□ 1.41
C9orf47-202ENST00000375850 EXOC3L4Q17RC7 722 aa23.84■■□□□ 1.41
C9orf47-202ENST00000375850 AGBL4Q5VU57 503 aa23.84■■□□□ 1.41
C9orf47-202ENST00000375850 WDTC1Q8N5D0 677 aa23.84■■□□□ 1.41
C9orf47-202ENST00000375850 SH2D3CQ8N5H7 860 aa23.84■■□□□ 1.41
C9orf47-202ENST00000375850 ZNF397Q8NF99 534 aaPredicted RBP23.84■■□□□ 1.41
C9orf47-202ENST00000375850 PIP4K2CQ8TBX8 421 aa23.84■■□□□ 1.41
C9orf47-202ENST00000375850 LRIG1Q96JA1 1093 aa23.84■■□□□ 1.41
C9orf47-202ENST00000375850 C2orf49Q9BVC5 232 aaPredicted RBP23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms