RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 CCL14Q16627 93 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 SOWAHAQ2M3V2 549 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 MAMDC4Q6UXC1 1216 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 TMEM110Q86TL2 294 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 TP53INP2Q8IXH6 220 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 GALNT4Q8N4A0 578 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 MARVELD2Q8N4S9 558 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 C7orf31Q8N865 590 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 TDRD5Q8NAT2 981 aaKnown RBP14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 ACVR1CQ8NER5 493 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 FAM167AQ96KS9 214 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 SLC4A5Q9BY07 1137 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 FAM96AQ9H5X1 160 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 PREBQ9HCU5 417 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 CDY2AQ9Y6F7 541 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 CDY1Q9Y6F8 540 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 EVPLQ92817 2033 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 G3V2L1 256 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 STX16-NPEPL1H3BU86 382 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 NOP56O00567 594 aaKnown RBP14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 DENRO43583 198 aaKnown RBP14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 TOMM70O94826 608 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 MPSTP25325 297 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 PIK3R1P27986 724 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 EPHA3P29320 983 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 GP5P40197 560 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 NR2C2P49116 596 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 MS4A2Q01362 244 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 MAP7Q14244 749 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 INSCQ1MX18 579 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 PKDCCQ504Y2 493 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 C6orf52Q5T4I8 152 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 KLHDC10Q6PID8 442 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 DSELQ8IZU8 1212 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 LILRA2Q8N149 483 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 SLC35F5Q8WV83 523 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 P2RY11Q96G91 374 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 LRGUKQ96M69 825 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 MPHOSPH6Q99547 160 aaKnown RBP14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 KATNBL1Q9H079 304 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 VRTNQ9H8Y1 702 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 TCF7L2Q9NQB0 619 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 RNF19AQ9NV58 838 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 DPP3Q9NY33 737 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 HSFX1Q9UBD0 423 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 STK39Q9UEW8 545 aa14.42□□□□□ -0.1
CLCNKA-202ENST00000375692 PPEF2O14830 753 aa14.41□□□□□ -0.1
CLCNKA-202ENST00000375692 HNRNPRO43390 633 aaKnown RBP14.41□□□□□ -0.1
CLCNKA-202ENST00000375692 MFSD11O43934 449 aa14.41□□□□□ -0.1
CLCNKA-202ENST00000375692 MLNP12872 115 aa14.41□□□□□ -0.1
CLCNKA-202ENST00000375692 LCP1P13796 627 aa14.41□□□□□ -0.1
CLCNKA-202ENST00000375692 GLDCP23378 1020 aa14.41□□□□□ -0.1
CLCNKA-202ENST00000375692 RPL5P46777 297 aaKnown RBP14.41□□□□□ -0.1
CLCNKA-202ENST00000375692 USP46P62068 366 aa14.41□□□□□ -0.1
CLCNKA-202ENST00000375692 HTRA3P83110 453 aa14.41□□□□□ -0.1
CLCNKA-202ENST00000375692 MYBPC1Q00872 1141 aa14.41□□□□□ -0.1
CLCNKA-202ENST00000375692 AMHR2Q16671 573 aa14.41□□□□□ -0.1
CLCNKA-202ENST00000375692 TMEM198Q66K66 360 aa14.41□□□□□ -0.1
CLCNKA-202ENST00000375692 FSTL4Q6MZW2 842 aa14.41□□□□□ -0.1
CLCNKA-202ENST00000375692 STRA8Q7Z7C7 330 aa14.41□□□□□ -0.1
CLCNKA-202ENST00000375692 FAM131BQ86XD5 332 aa14.41□□□□□ -0.1
CLCNKA-202ENST00000375692 CCNYQ8ND76 341 aa14.41□□□□□ -0.1
CLCNKA-202ENST00000375692 NDRG1Q92597 394 aaKnown RBP14.41□□□□□ -0.1
CLCNKA-202ENST00000375692 CERS2Q96G23 380 aa14.41□□□□□ -0.1
CLCNKA-202ENST00000375692 AGAP3Q96P47 875 aa14.41□□□□□ -0.1
CLCNKA-202ENST00000375692 ARHGAP39Q9C0H5 1083 aa14.41□□□□□ -0.1
CLCNKA-202ENST00000375692 C6orf203Q9P0P8 240 aaPredicted RBP14.41□□□□□ -0.1
CLCNKA-202ENST00000375692 PHF24Q9UPV7 400 aa14.41□□□□□ -0.1
CLCNKA-202ENST00000375692 AP4B1Q9Y6B7 739 aa14.41□□□□□ -0.1
CLCNKA-202ENST00000375692 hCG_2014768A0A024R1R8 64 aa14.41□□□□□ -0.1
CLCNKA-202ENST00000375692 A0A087WZ62 844 aa14.41□□□□□ -0.1
CLCNKA-202ENST00000375692 SRGAP2BP0DMP2 458 aa14.41□□□□□ -0.1
CLCNKA-202ENST00000375692 ZFXP17010 805 aaPredicted RBP14.41□□□□□ -0.1
CLCNKA-202ENST00000375692 CYP2B6P20813 491 aa14.41□□□□□ -0.1
CLCNKA-202ENST00000375692 ITGA7Q13683 1181 aa14.41□□□□□ -0.1
CLCNKA-202ENST00000375692 FLOT2Q14254 428 aa14.41□□□□□ -0.1
CLCNKA-202ENST00000375692 OR52K1Q8NGK4 314 aa14.41□□□□□ -0.1
CLCNKA-202ENST00000375692 ZFP28Q8NHY6 868 aa14.41□□□□□ -0.1
CLCNKA-202ENST00000375692 PIP4K2CQ8TBX8 421 aa14.41□□□□□ -0.1
CLCNKA-202ENST00000375692 MARK4Q96L34 752 aa14.41□□□□□ -0.1
CLCNKA-202ENST00000375692 FDXACB1Q9BRP7 624 aaPredicted RBP14.41□□□□□ -0.1
CLCNKA-202ENST00000375692 GATA5Q9BWX5 397 aaPredicted RBP14.41□□□□□ -0.1
CLCNKA-202ENST00000375692 PDZD7Q9H5P4 517 aa14.41□□□□□ -0.1
CLCNKA-202ENST00000375692 SNX9Q9Y5X1 595 aa14.41□□□□□ -0.1
CLCNKA-202ENST00000375692 PLXNB2O15031 1838 aa14.4□□□□□ -0.1
CLCNKA-202ENST00000375692 SYNJ2BP-COX16A0A087WUM0 186 aa14.4□□□□□ -0.1
CLCNKA-202ENST00000375692 A0A096LPK6 155 aa14.4□□□□□ -0.1
CLCNKA-202ENST00000375692 ATP9BO43861 1147 aa14.4□□□□□ -0.1
CLCNKA-202ENST00000375692 POLBP06746 335 aa14.4□□□□□ -0.1
CLCNKA-202ENST00000375692 PRDX6P30041 224 aa14.4□□□□□ -0.1
CLCNKA-202ENST00000375692 RBP5P82980 135 aa14.4□□□□□ -0.1
CLCNKA-202ENST00000375692 CDKL1Q00532 357 aa14.4□□□□□ -0.1
CLCNKA-202ENST00000375692 CAP1Q01518 475 aa14.4□□□□□ -0.1
CLCNKA-202ENST00000375692 TTLL4Q14679 1199 aa14.4□□□□□ -0.1
CLCNKA-202ENST00000375692 MYLK3Q32MK0 819 aa14.4□□□□□ -0.1
CLCNKA-202ENST00000375692 KYQ8NBH2 561 aa14.4□□□□□ -0.1
CLCNKA-202ENST00000375692 RCN3Q96D15 328 aa14.4□□□□□ -0.1
CLCNKA-202ENST00000375692 PRPF18Q99633 342 aaKnown RBP14.4□□□□□ -0.1
CLCNKA-202ENST00000375692 TINF2Q9BSI4 451 aa14.4□□□□□ -0.1
CLCNKA-202ENST00000375692 DPEP3Q9H4B8 488 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms