RNA–Protein interactions for RNA: ENST00000375429.7

NELFE-202, Transcript of negative elongation factor complex member E, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NELFE, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-202ENST00000375429 DNTTIP2Q5QJE6 756 aaKnown RBP21.14■□□□□ 0.97
NELFE-202ENST00000375429 ZNF783Q6ZMS7 281 aa21.14■□□□□ 0.97
NELFE-202ENST00000375429 GJD3Q8N144 294 aa21.14■□□□□ 0.97
NELFE-202ENST00000375429 PHTF2Q8N3S3 785 aa21.14■□□□□ 0.97
NELFE-202ENST00000375429 LRRN4Q8WUT4 740 aa21.14■□□□□ 0.97
NELFE-202ENST00000375429 MAIP1Q8WWC4 291 aa21.14■□□□□ 0.97
NELFE-202ENST00000375429 MUC3BQ9H195 1237 aa21.14■□□□□ 0.97
NELFE-202ENST00000375429 RNF14Q9UBS8 474 aa21.14■□□□□ 0.97
NELFE-202ENST00000375429 GGA2Q9UJY4 613 aa21.14■□□□□ 0.97
NELFE-202ENST00000375429 SLC27A6Q9Y2P4 619 aa21.14■□□□□ 0.97
NELFE-202ENST00000375429 SHROOM3Q8TF72 1996 aa21.13■□□□□ 0.97
NELFE-202ENST00000375429 SPECC1L-ADORA2AF8WAN1 911 aa21.13■□□□□ 0.97
NELFE-202ENST00000375429 DFFAO00273 331 aa21.13■□□□□ 0.97
NELFE-202ENST00000375429 PABPC1P11940 636 aaKnown RBP21.13■□□□□ 0.97
NELFE-202ENST00000375429 CTHP32929 405 aa21.13■□□□□ 0.97
NELFE-202ENST00000375429 EIF2DP41214 584 aaKnown RBP21.13■□□□□ 0.97
NELFE-202ENST00000375429 PLK1P53350 603 aa21.13■□□□□ 0.97
NELFE-202ENST00000375429 OXCT1P55809 520 aa21.13■□□□□ 0.97
NELFE-202ENST00000375429 GALNT2Q10471 571 aa21.13■□□□□ 0.97
NELFE-202ENST00000375429 SLC12A1Q13621 1099 aa21.13■□□□□ 0.97
NELFE-202ENST00000375429 NOMO1Q15155 1222 aa21.13■□□□□ 0.97
NELFE-202ENST00000375429 PARP15Q460N3 678 aa21.13■□□□□ 0.97
NELFE-202ENST00000375429 ARHGAP36Q6ZRI8 547 aa21.13■□□□□ 0.97
NELFE-202ENST00000375429 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.13■□□□□ 0.97
NELFE-202ENST00000375429 TTC13Q8NBP0 860 aa21.13■□□□□ 0.97
NELFE-202ENST00000375429 NECAB3Q96P71 396 aaPredicted RBP21.13■□□□□ 0.97
NELFE-202ENST00000375429 OLFM3Q96PB7 478 aa21.13■□□□□ 0.97
NELFE-202ENST00000375429 NAP1L3Q99457 506 aaPredicted RBP21.13■□□□□ 0.97
NELFE-202ENST00000375429 SPON2Q9BUD6 331 aa21.13■□□□□ 0.97
NELFE-202ENST00000375429 AP1M1Q9BXS5 423 aa21.13■□□□□ 0.97
NELFE-202ENST00000375429 ACE2Q9BYF1 805 aaPredicted RBP21.13■□□□□ 0.97
NELFE-202ENST00000375429 FBRSL1Q9HCM7 1045 aaKnown RBP21.13■□□□□ 0.97
NELFE-202ENST00000375429 PIAS3Q9Y6X2 628 aa21.13■□□□□ 0.97
NELFE-202ENST00000375429 ARHGAP42A6NI28 874 aa21.12■□□□□ 0.97
NELFE-202ENST00000375429 PAFAH1B1P43034 410 aa21.12■□□□□ 0.97
NELFE-202ENST00000375429 GALK1P51570 392 aa21.12■□□□□ 0.97
NELFE-202ENST00000375429 SERINC3Q13530 473 aa21.12■□□□□ 0.97
NELFE-202ENST00000375429 PLEKHG6Q3KR16 790 aa21.12■□□□□ 0.97
NELFE-202ENST00000375429 SLC44A4Q53GD3 710 aa21.12■□□□□ 0.97
NELFE-202ENST00000375429 TMEM215Q68D42 235 aa21.12■□□□□ 0.97
NELFE-202ENST00000375429 IL31Q6EBC2 164 aa21.12■□□□□ 0.97
NELFE-202ENST00000375429 GRAMD4Q6IC98 578 aa21.12■□□□□ 0.97
NELFE-202ENST00000375429 TXNDC11Q6PKC3 985 aa21.12■□□□□ 0.97
NELFE-202ENST00000375429 B4GALNT4Q76KP1 1039 aa21.12■□□□□ 0.97
NELFE-202ENST00000375429 RALGPS2Q86X27 583 aaPredicted RBP21.12■□□□□ 0.97
NELFE-202ENST00000375429 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.12■□□□□ 0.97
NELFE-202ENST00000375429 C1orf54Q8WWF1 131 aa21.12■□□□□ 0.97
NELFE-202ENST00000375429 ATG4AQ8WYN0 398 aa21.12■□□□□ 0.97
NELFE-202ENST00000375429 PNKPQ96T60 521 aa21.12■□□□□ 0.97
NELFE-202ENST00000375429 C8orf33Q9H7E9 229 aaPredicted RBP21.12■□□□□ 0.97
NELFE-202ENST00000375429 RAD54BQ9Y620 910 aa21.12■□□□□ 0.97
NELFE-202ENST00000375429 GLDCP23378 1020 aa21.11■□□□□ 0.97
NELFE-202ENST00000375429 GARSP41250 739 aaKnown RBP21.11■□□□□ 0.97
NELFE-202ENST00000375429 KDSRQ06136 332 aa21.11■□□□□ 0.97
NELFE-202ENST00000375429 FUT11Q495W5 492 aa21.11■□□□□ 0.97
NELFE-202ENST00000375429 PITRM1Q5JRX3 1037 aa21.11■□□□□ 0.97
NELFE-202ENST00000375429 BZW1Q7L1Q6 419 aaKnown RBP21.11■□□□□ 0.97
NELFE-202ENST00000375429 ADIPOR2Q86V24 386 aa21.11■□□□□ 0.97
NELFE-202ENST00000375429 ZC3H18Q86VM9 953 aaKnown RBP21.11■□□□□ 0.97
NELFE-202ENST00000375429 PRELID2Q8N945 189 aa21.11■□□□□ 0.97
NELFE-202ENST00000375429 ATP13A1Q9HD20 1204 aa21.11■□□□□ 0.97
NELFE-202ENST00000375429 VPS28Q9UK41 221 aa21.11■□□□□ 0.97
NELFE-202ENST00000375429 MRFAP1Q9Y605 127 aa21.11■□□□□ 0.97
NELFE-202ENST00000375429 SHISA7A6NL88 538 aa21.1■□□□□ 0.97
NELFE-202ENST00000375429 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.1■□□□□ 0.97
NELFE-202ENST00000375429 KRIT1O00522 736 aa21.1■□□□□ 0.97
NELFE-202ENST00000375429 NCAM2O15394 837 aa21.1■□□□□ 0.97
NELFE-202ENST00000375429 KDELR3O43731 214 aa21.1■□□□□ 0.97
NELFE-202ENST00000375429 MAFKO60675 156 aa21.1■□□□□ 0.97
NELFE-202ENST00000375429 MX2P20592 715 aa21.1■□□□□ 0.97
NELFE-202ENST00000375429 ETFBP38117 255 aa21.1■□□□□ 0.97
NELFE-202ENST00000375429 EIF3EP60228 445 aaKnown RBP21.1■□□□□ 0.97
NELFE-202ENST00000375429 TUBB2AQ13885 445 aa21.1■□□□□ 0.97
NELFE-202ENST00000375429 PDK1Q15118 436 aa21.1■□□□□ 0.97
NELFE-202ENST00000375429 TJAP1Q5JTD0 557 aa21.1■□□□□ 0.97
NELFE-202ENST00000375429 ZNF354CQ86Y25 554 aa21.1■□□□□ 0.97
NELFE-202ENST00000375429 SFTPA1Q8IWL2 248 aa21.1■□□□□ 0.97
NELFE-202ENST00000375429 LGMNQ99538 433 aa21.1■□□□□ 0.97
NELFE-202ENST00000375429 TUBB2BQ9BVA1 445 aa21.1■□□□□ 0.97
NELFE-202ENST00000375429 IPO11Q9UI26 975 aaKnown RBP21.1■□□□□ 0.97
NELFE-202ENST00000375429 PRRT4C9JH25 899 aa21.1■□□□□ 0.97
NELFE-202ENST00000375429 J3KR12 359 aa21.1■□□□□ 0.97
NELFE-202ENST00000375429 SNAP91O60641 907 aa21.1■□□□□ 0.97
NELFE-202ENST00000375429 ZMPSTE24O75844 475 aa21.1■□□□□ 0.97
NELFE-202ENST00000375429 GLULP15104 373 aa21.1■□□□□ 0.97
NELFE-202ENST00000375429 XRCC4Q13426 336 aa21.1■□□□□ 0.97
NELFE-202ENST00000375429 DMC1Q14565 340 aa21.1■□□□□ 0.97
NELFE-202ENST00000375429 AHI1Q8N157 1196 aa21.1■□□□□ 0.97
NELFE-202ENST00000375429 TERB1Q8NA31 727 aa21.1■□□□□ 0.97
NELFE-202ENST00000375429 CCNYQ8ND76 341 aa21.1■□□□□ 0.97
NELFE-202ENST00000375429 SLC35B2Q8TB61 432 aa21.1■□□□□ 0.97
NELFE-202ENST00000375429 HDAC11Q96DB2 347 aa21.1■□□□□ 0.97
NELFE-202ENST00000375429 P2RY13Q9BPV8 354 aa21.1■□□□□ 0.97
NELFE-202ENST00000375429 C10orf88Q9H8K7 445 aa21.1■□□□□ 0.97
NELFE-202ENST00000375429 DNPEPQ9ULA0 475 aa21.1■□□□□ 0.97
NELFE-202ENST00000375429 F5P12259 2224 aa21.09■□□□□ 0.97
NELFE-202ENST00000375429 CBX4O00257 560 aa21.09■□□□□ 0.97
NELFE-202ENST00000375429 LIASO43766 372 aa21.09■□□□□ 0.97
NELFE-202ENST00000375429 KAT7O95251 611 aa21.09■□□□□ 0.97
NELFE-202ENST00000375429 RBP3P10745 1247 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms