RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 KHDRBS3O75525 346 aaKnown RBP6.72□□□□□ -1.33
UBR4-204ENST00000375254 TFAMQ00059 246 aaKnown RBP6.72□□□□□ -1.33
UBR4-204ENST00000375254 SEPT5Q99719 369 aaPredicted RBP6.72□□□□□ -1.33
UBR4-204ENST00000375254 FTH1P02794 183 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 GMPRP36959 345 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 CTDSPL2Q05D32 466 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 SGMS1Q86VZ5 419 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 EPHX4Q8IUS5 362 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 BHLHE22Q8NFJ8 381 aaPredicted RBP6.72□□□□□ -1.33
UBR4-204ENST00000375254 CCDC107Q8WV48 283 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 SNTG2Q9NY99 539 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 FETUBQ9UGM5 382 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 NAIPQ13075 1403 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 TO15178 435 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 ETS2P15036 469 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 NEK3P51956 506 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 FASTKQ14296 549 aaKnown RBP6.72□□□□□ -1.33
UBR4-204ENST00000375254 ANO4Q32M45 955 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 STAP1Q9ULZ2 295 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 NEDD4P46934 1319 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 USP17L12C9JPN9 530 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 USP17L21D6R901 530 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 PDE8AO60658 829 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 AVILO75366 819 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 DGKIO75912 1065 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 ANXA9O76027 345 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 LCP1P13796 627 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 DDB1Q16531 1140 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 SPDYE7PQ495Y7 208 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 GPR158Q5T848 1215 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 DIRAS2Q96HU8 199 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 C1orf21Q9H246 121 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 PTTG3PQ9NZH4 202 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 STXBP5LQ9Y2K9 1186 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 SULT1C2O00338 296 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 S100PP25815 95 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 CDC42EP1Q00587 391 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 ZMYND11Q15326 602 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 FUT11Q495W5 492 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 RABL3Q5HYI8 236 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 TYW3Q6IPR3 259 aaKnown RBP6.72□□□□□ -1.33
UBR4-204ENST00000375254 TBC1D16Q8TBP0 767 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 CLP1Q92989 425 aaKnown RBP6.72□□□□□ -1.33
UBR4-204ENST00000375254 PRDM11Q9NQV5 511 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 EVLQ9UI08 416 aaPredicted RBP6.72□□□□□ -1.33
UBR4-204ENST00000375254 FAM47E-STBD1D6RA91 191 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 IL18R1Q13478 541 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 TMEM132CQ8N3T6 1108 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 PNMA1Q8ND90 353 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 SUPT20HQ8NEM7 779 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 SLCO1B3Q9NPD5 702 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 CYP3A7-CYP3A51PA0A087WV96 503 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 NEMP1O14524 444 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 CYP3A7P24462 503 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 CD6P30203 668 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 SLC18A2Q05940 514 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 SMPD3Q9NY59 655 aaPredicted RBP6.72□□□□□ -1.33
UBR4-204ENST00000375254 H3BM21 787 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 MRPS14O60783 128 aaKnown RBP6.72□□□□□ -1.33
UBR4-204ENST00000375254 MLYCDO95822 493 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 SMG8Q8ND04 991 aaKnown RBP6.72□□□□□ -1.33
UBR4-204ENST00000375254 FBXO25Q8TCJ0 367 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 IL7P13232 177 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 GPD1P21695 349 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 IL13P35225 146 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 SREBF2Q12772 1141 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 DPY19L3Q6ZPD9 716 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 EYA3Q99504 573 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 RETREG1Q9H6L5 497 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 GMPPBQ9Y5P6 360 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 NPHP3-ACAD11A0A0J9YXS1 232 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 AIREO43918 545 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 VNN2O95498 520 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 PGRP06401 933 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 HNRNPH3P31942 346 aaKnown RBP6.72□□□□□ -1.33
UBR4-204ENST00000375254 ERFP50548 548 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 RAB5CP51148 216 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 MGAT5Q09328 741 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 MXD4Q14582 209 aaPredicted RBP6.72□□□□□ -1.33
UBR4-204ENST00000375254 EFHC2Q5JST6 749 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 OLFML2AQ68BL7 652 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 OR6B2Q6IFH4 312 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 HAGHLQ6PII5 290 aaPredicted RBP6.72□□□□□ -1.33
UBR4-204ENST00000375254 P2RY8Q86VZ1 359 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 METTL23Q86XA0 190 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 CABLES1Q8TDN4 633 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 EPS8L1Q8TE68 723 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 IL1RL2Q9HB29 575 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 CHRAC1Q9NRG0 131 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 PADI2Q9Y2J8 665 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 UTYO14607 1347 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 ITM2AO43736 263 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 PPM1BO75688 479 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 HMGN1P05114 100 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 OVGP1Q12889 678 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 PFKFB3Q16875 520 aaPredicted RBP6.72□□□□□ -1.33
UBR4-204ENST00000375254 FAM160B1Q5W0V3 765 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 UNC5BQ8IZJ1 945 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 SLC30A2Q9BRI3 323 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 CASS4Q9NQ75 786 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 171.9 ms