RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 BOLA3Q53S33 107 aa14.66□□□□□ -0.06
HMGA1-203ENST00000374116 ATAT1Q5SQI0 421 aa14.66□□□□□ -0.06
HMGA1-203ENST00000374116 GAREM2Q75VX8 874 aa14.66□□□□□ -0.06
HMGA1-203ENST00000374116 SDCCAG8Q86SQ7 713 aaPredicted RBP14.66□□□□□ -0.06
HMGA1-203ENST00000374116 TMC8Q8IU68 726 aa14.66□□□□□ -0.06
HMGA1-203ENST00000374116 MAP7D3Q8IWC1 876 aa14.66□□□□□ -0.06
HMGA1-203ENST00000374116 SCUBE3Q8IX30 993 aa14.66□□□□□ -0.06
HMGA1-203ENST00000374116 ZBED8Q8IZ13 594 aa14.66□□□□□ -0.06
HMGA1-203ENST00000374116 RAB6CQ9H0N0 254 aa14.66□□□□□ -0.06
HMGA1-203ENST00000374116 ASAH2Q9NR71 780 aa14.66□□□□□ -0.06
HMGA1-203ENST00000374116 ABCF3Q9NUQ8 709 aa14.66□□□□□ -0.06
HMGA1-203ENST00000374116 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.66□□□□□ -0.06
HMGA1-203ENST00000374116 MYO16Q9Y6X6 1858 aa14.66□□□□□ -0.06
HMGA1-203ENST00000374116 TCF20Q9UGU0 1960 aaKnown RBP14.65□□□□□ -0.06
HMGA1-203ENST00000374116 PATJQ8NI35 1801 aa14.65□□□□□ -0.06
HMGA1-203ENST00000374116 USP17L7P0C7H9 530 aa14.65□□□□□ -0.06
HMGA1-203ENST00000374116 CSH1P0DML2 217 aa14.65□□□□□ -0.06
HMGA1-203ENST00000374116 CSH2P0DML3 217 aa14.65□□□□□ -0.06
HMGA1-203ENST00000374116 CCNB1P14635 433 aa14.65□□□□□ -0.06
HMGA1-203ENST00000374116 CREB1P16220 341 aa14.65□□□□□ -0.06
HMGA1-203ENST00000374116 STIP1P31948 543 aaKnown RBP14.65□□□□□ -0.06
HMGA1-203ENST00000374116 RPL22P35268 128 aaKnown RBP14.65□□□□□ -0.06
HMGA1-203ENST00000374116 MSH2P43246 934 aa14.65□□□□□ -0.06
HMGA1-203ENST00000374116 IFNAR2P48551 515 aa14.65□□□□□ -0.06
HMGA1-203ENST00000374116 TKTL1P51854 596 aa14.65□□□□□ -0.06
HMGA1-203ENST00000374116 GDF10P55107 478 aa14.65□□□□□ -0.06
HMGA1-203ENST00000374116 CDH6P55285 790 aa14.65□□□□□ -0.06
HMGA1-203ENST00000374116 ADIGQ0VDE8 80 aa14.65□□□□□ -0.06
HMGA1-203ENST00000374116 TAF10Q12962 218 aa14.65□□□□□ -0.06
HMGA1-203ENST00000374116 PDIA2Q13087 525 aaKnown RBP14.65□□□□□ -0.06
HMGA1-203ENST00000374116 RASA2Q15283 850 aa14.65□□□□□ -0.06
HMGA1-203ENST00000374116 TAF11Q15544 211 aa14.65□□□□□ -0.06
HMGA1-203ENST00000374116 C15orf59Q2T9L4 293 aaPredicted RBP14.65□□□□□ -0.06
HMGA1-203ENST00000374116 TBC1D25Q3MII6 688 aa14.65□□□□□ -0.06
HMGA1-203ENST00000374116 ARHGEF18Q6ZSZ5 1173 aa14.65□□□□□ -0.06
HMGA1-203ENST00000374116 PDZD4Q76G19 769 aaPredicted RBP14.65□□□□□ -0.06
HMGA1-203ENST00000374116 GET4Q7L5D6 327 aaPredicted RBP14.65□□□□□ -0.06
HMGA1-203ENST00000374116 SLC26A9Q7LBE3 791 aa14.65□□□□□ -0.06
HMGA1-203ENST00000374116 TMEM150AQ86TG1 271 aa14.65□□□□□ -0.06
HMGA1-203ENST00000374116 VSIG1Q86XK7 387 aa14.65□□□□□ -0.06
HMGA1-203ENST00000374116 LMNTD2Q8IXW0 634 aa14.65□□□□□ -0.06
HMGA1-203ENST00000374116 NAT8LQ8N9F0 302 aa14.65□□□□□ -0.06
HMGA1-203ENST00000374116 TEKT4Q8WW24 435 aa14.65□□□□□ -0.06
HMGA1-203ENST00000374116 CPT1BQ92523 772 aa14.65□□□□□ -0.06
HMGA1-203ENST00000374116 MAML1Q92585 1016 aa14.65□□□□□ -0.06
HMGA1-203ENST00000374116 CENPIQ92674 756 aaPredicted RBP14.65□□□□□ -0.06
HMGA1-203ENST00000374116 DTNBP1Q96EV8 351 aa14.65□□□□□ -0.06
HMGA1-203ENST00000374116 SPATA17Q96L03 361 aa14.65□□□□□ -0.06
HMGA1-203ENST00000374116 HSFY1Q96LI6 401 aa14.65□□□□□ -0.06
HMGA1-203ENST00000374116 VPS37BQ9H9H4 285 aa14.65□□□□□ -0.06
HMGA1-203ENST00000374116 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.65□□□□□ -0.06
HMGA1-203ENST00000374116 TBK1Q9UHD2 729 aa14.65□□□□□ -0.06
HMGA1-203ENST00000374116 XPO1O14980 1071 aaKnown RBP14.64□□□□□ -0.07
HMGA1-203ENST00000374116 GRAP2O75791 330 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 RBP3P10745 1247 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 IL4RP24394 825 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 CCDC15Q0P6D6 951 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 DPYSL3Q14195 570 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 NOMO1Q15155 1222 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 FAM133BQ5BKY9 247 aaKnown RBP14.64□□□□□ -0.07
HMGA1-203ENST00000374116 PTCRAQ6ISU1 281 aaPredicted RBP14.64□□□□□ -0.07
HMGA1-203ENST00000374116 PPP1R21Q6ZMI0 780 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 UNC45BQ8IWX7 931 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 SRRM1Q8IYB3 904 aaKnown RBP14.64□□□□□ -0.07
HMGA1-203ENST00000374116 CKAP2Q8WWK9 683 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 TBCBQ99426 244 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 ATXN3LQ9H3M9 355 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 IL21Q9HBE4 155 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 NKIRAS1Q9NYS0 192 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 FETUBQ9UGM5 382 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 SLC24A2Q9UI40 661 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.64□□□□□ -0.07
HMGA1-203ENST00000374116 RASA4BC9J798 803 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 RASA4O43374 803 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 MOSPD3O75425 235 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 KRT16P08779 473 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 TSHRP16473 764 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 CEBPBP17676 345 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 GCAP28676 217 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 SDC4P31431 198 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 PHBP35232 272 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 PTPN9P43378 593 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 KRT81Q14533 505 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 FASTKD3Q14CZ7 662 aaKnown RBP14.64□□□□□ -0.07
HMGA1-203ENST00000374116 TMED2Q15363 201 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 TEAD2Q15562 447 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 PARP6Q2NL67 630 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 LEXMQ3ZCV2 418 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 TXNDC8Q6A555 127 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 ANO7Q6IWH7 933 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 ITIH5Q86UX2 942 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 SHKBP1Q8TBC3 707 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 MGARPQ8TDB4 240 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 FBXO32Q969P5 355 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 KLHL29Q96CT2 875 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 RNF157Q96PX1 679 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 ELAC2Q9BQ52 826 aaKnown RBP14.64□□□□□ -0.07
HMGA1-203ENST00000374116 ULBP1Q9BZM6 244 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 WDR6Q9NNW5 1121 aaKnown RBP14.64□□□□□ -0.07
HMGA1-203ENST00000374116 SENP1Q9P0U3 644 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms