RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 BAZ2AQ9UIF9 1905 aaKnown RBP17.71■□□□□ 0.43
PTPRU-202ENST00000373779 LTFP02788 710 aa17.71■□□□□ 0.43
PTPRU-202ENST00000373779 PIK3R1P27986 724 aa17.71■□□□□ 0.43
PTPRU-202ENST00000373779 ACBD5Q5T8D3 534 aaPredicted RBP17.71■□□□□ 0.43
PTPRU-202ENST00000373779 TSHZ1Q6ZSZ6 1077 aa17.71■□□□□ 0.43
PTPRU-202ENST00000373779 KIAA0319LQ8IZA0 1049 aa17.71■□□□□ 0.43
PTPRU-202ENST00000373779 RCN3Q96D15 328 aa17.71■□□□□ 0.43
PTPRU-202ENST00000373779 DHX33Q9H6R0 707 aaKnown RBP17.71■□□□□ 0.43
PTPRU-202ENST00000373779 ENTPD7Q9NQZ7 604 aa17.71■□□□□ 0.43
PTPRU-202ENST00000373779 TRIM38O00635 465 aa17.71■□□□□ 0.43
PTPRU-202ENST00000373779 NFKB1P19838 968 aa17.71■□□□□ 0.43
PTPRU-202ENST00000373779 PSME3P61289 254 aa17.71■□□□□ 0.43
PTPRU-202ENST00000373779 CYP51A1Q16850 503 aa17.71■□□□□ 0.43
PTPRU-202ENST00000373779 PPP1R26Q5T8A7 1209 aaPredicted RBP17.71■□□□□ 0.43
PTPRU-202ENST00000373779 LIPMQ5VYY2 423 aa17.71■□□□□ 0.43
PTPRU-202ENST00000373779 ILDR2Q71H61 639 aa17.71■□□□□ 0.43
PTPRU-202ENST00000373779 TTC7BQ86TV6 843 aa17.71■□□□□ 0.43
PTPRU-202ENST00000373779 PLD5Q8N7P1 536 aa17.71■□□□□ 0.43
PTPRU-202ENST00000373779 RNF217Q8TC41 542 aa17.71■□□□□ 0.43
PTPRU-202ENST00000373779 RTKNQ9BST9 563 aa17.71■□□□□ 0.43
PTPRU-202ENST00000373779 BDH2Q9BUT1 245 aa17.71■□□□□ 0.43
PTPRU-202ENST00000373779 ZNF556Q9HAH1 456 aa17.71■□□□□ 0.43
PTPRU-202ENST00000373779 LDLRP01130 860 aa17.71■□□□□ 0.43
PTPRU-202ENST00000373779 USP17L7P0C7H9 530 aa17.71■□□□□ 0.43
PTPRU-202ENST00000373779 EPHA3P29320 983 aa17.71■□□□□ 0.43
PTPRU-202ENST00000373779 RENBPP51606 427 aa17.71■□□□□ 0.43
PTPRU-202ENST00000373779 USP4Q13107 963 aa17.71■□□□□ 0.43
PTPRU-202ENST00000373779 LPCAT4Q643R3 524 aa17.71■□□□□ 0.43
PTPRU-202ENST00000373779 SERAC1Q96JX3 654 aa17.71■□□□□ 0.43
PTPRU-202ENST00000373779 NSMCE2Q96MF7 247 aa17.71■□□□□ 0.43
PTPRU-202ENST00000373779 ROBO1Q9Y6N7 1651 aa17.71■□□□□ 0.43
PTPRU-202ENST00000373779 IRF1P10914 325 aa17.71■□□□□ 0.42
PTPRU-202ENST00000373779 CCNB1P14635 433 aa17.71■□□□□ 0.42
PTPRU-202ENST00000373779 DCTN2Q13561 401 aaKnown RBP17.71■□□□□ 0.42
PTPRU-202ENST00000373779 SQLEQ14534 574 aa17.71■□□□□ 0.42
PTPRU-202ENST00000373779 RFWD3Q6PCD5 774 aa17.71■□□□□ 0.42
PTPRU-202ENST00000373779 CMC1Q7Z7K0 106 aa17.71■□□□□ 0.42
PTPRU-202ENST00000373779 SLC4A11Q8NBS3 891 aa17.71■□□□□ 0.42
PTPRU-202ENST00000373779 F5H5T6 163 aa17.7■□□□□ 0.42
PTPRU-202ENST00000373779 AXLP30530 894 aa17.7■□□□□ 0.42
PTPRU-202ENST00000373779 TUBP50607 506 aa17.7■□□□□ 0.42
PTPRU-202ENST00000373779 ADARP55265 1226 aaKnown RBP17.7■□□□□ 0.42
PTPRU-202ENST00000373779 LRRC8DQ7L1W4 858 aa17.7■□□□□ 0.42
PTPRU-202ENST00000373779 KCTD4Q8WVF5 259 aa17.7■□□□□ 0.42
PTPRU-202ENST00000373779 CLEC4DQ8WXI8 215 aa17.7■□□□□ 0.42
PTPRU-202ENST00000373779 COMMD8Q9NX08 183 aa17.7■□□□□ 0.42
PTPRU-202ENST00000373779 FAM32AQ9Y421 112 aaKnown RBP17.7■□□□□ 0.42
PTPRU-202ENST00000373779 BCLAF3A2AJT9 711 aaKnown RBP17.7■□□□□ 0.42
PTPRU-202ENST00000373779 CASTOR2A6NHX0 329 aa17.7■□□□□ 0.42
PTPRU-202ENST00000373779 GJB1P08034 283 aa17.7■□□□□ 0.42
PTPRU-202ENST00000373779 AKT1P31749 480 aa17.7■□□□□ 0.42
PTPRU-202ENST00000373779 CCNHP51946 323 aaPredicted RBP17.7■□□□□ 0.42
PTPRU-202ENST00000373779 GDF10P55107 478 aa17.7■□□□□ 0.42
PTPRU-202ENST00000373779 FBXO39Q8N4B4 442 aa17.7■□□□□ 0.42
PTPRU-202ENST00000373779 TSPAN14Q8NG11 270 aa17.7■□□□□ 0.42
PTPRU-202ENST00000373779 DNAJB3Q8WWF6 145 aa17.7■□□□□ 0.42
PTPRU-202ENST00000373779 ZNF839A8K0R7 811 aa17.7■□□□□ 0.42
PTPRU-202ENST00000373779 NR1H2P55055 460 aa17.7■□□□□ 0.42
PTPRU-202ENST00000373779 EFEMP1Q12805 493 aa17.7■□□□□ 0.42
PTPRU-202ENST00000373779 NEPROQ6NW34 567 aa17.7■□□□□ 0.42
PTPRU-202ENST00000373779 COPS5Q92905 334 aa17.7■□□□□ 0.42
PTPRU-202ENST00000373779 SLC4A5Q9BY07 1137 aa17.7■□□□□ 0.42
PTPRU-202ENST00000373779 GPR182O15218 404 aa17.7■□□□□ 0.42
PTPRU-202ENST00000373779 ATP5F1P24539 256 aaPredicted RBP17.7■□□□□ 0.42
PTPRU-202ENST00000373779 ILF2Q12905 390 aaKnown RBP17.7■□□□□ 0.42
PTPRU-202ENST00000373779 GNASQ5JWF2 1037 aa17.7■□□□□ 0.42
PTPRU-202ENST00000373779 RBM44Q6ZP01 1051 aaKnown RBP17.7■□□□□ 0.42
PTPRU-202ENST00000373779 ASB2Q96Q27 587 aa17.7■□□□□ 0.42
PTPRU-202ENST00000373779 EBF2Q9HAK2 575 aa17.7■□□□□ 0.42
PTPRU-202ENST00000373779 VTA1Q9NP79 307 aa17.7■□□□□ 0.42
PTPRU-202ENST00000373779 LNPEPQ9UIQ6 1025 aa17.7■□□□□ 0.42
PTPRU-202ENST00000373779 YDJCA8MPS7 323 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 PEX1O43933 1283 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 FAM98BQ52LJ0 330 aaKnown RBP17.69■□□□□ 0.42
PTPRU-202ENST00000373779 OTUD3Q5T2D3 398 aaPredicted RBP17.69■□□□□ 0.42
PTPRU-202ENST00000373779 EMC10Q5UCC4 262 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 SDCBP2Q9H190 292 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 OR12D3Q9UGF7 316 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 CRLS1Q9UJA2 301 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 AP4B1Q9Y6B7 739 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 CILPO75339 1184 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 ETS2P15036 469 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 NPR3P17342 541 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 ARL2P36404 184 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 TAF1CQ15572 869 aaPredicted RBP17.69■□□□□ 0.42
PTPRU-202ENST00000373779 PIGZQ86VD9 579 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 DHRSXQ8N5I4 330 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 HASPINQ8TF76 798 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 FBXO32Q969P5 355 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 CCDC28BQ9BUN5 200 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 TEX12Q9BXU0 123 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 PAIP1Q9H074 479 aaKnown RBP17.69■□□□□ 0.42
PTPRU-202ENST00000373779 PRG3Q9Y2Y8 225 aaPredicted RBP17.69■□□□□ 0.42
PTPRU-202ENST00000373779 FARP2O94887 1054 aaPredicted RBP17.69■□□□□ 0.42
PTPRU-202ENST00000373779 KRT8P05787 483 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 NNMTP40261 264 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 MRPS15P82914 257 aaKnown RBP17.69■□□□□ 0.42
PTPRU-202ENST00000373779 RNF19AQ9NV58 838 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 POLG2Q9UHN1 485 aa17.69■□□□□ 0.42
PTPRU-202ENST00000373779 LTA4HP09960 611 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms