RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 CCT7Q99832 543 aa11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 STRA6Q9BX79 667 aa11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 PLEKHA5Q9HAU0 1116 aa11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 ADCY6O43306 1168 aa11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 KRT3P12035 628 aa11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 AOC1P19801 751 aa11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 STT3AP46977 705 aa11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 NDST1P52848 882 aa11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 NOMO3P69849 1222 aa11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 MYBPC1Q00872 1141 aa11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 PTPN11Q06124 597 aaPredicted RBP11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 CCDC142Q17RM4 750 aa11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 LGSNQ5TDP6 509 aa11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 MARVELD2Q8N4S9 558 aa11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 FNDC8Q8TC99 324 aa11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 NKD2Q969F2 451 aaPredicted RBP11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 C18orf25Q96B23 403 aaPredicted RBP11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 COPS7BQ9H9Q2 264 aaPredicted RBP11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 GOLGA2P5Q9HBQ8 144 aa11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 MCM3APO60318 1980 aa11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 SF3B1O75533 1304 aaKnown RBP eCLIP11.43□□□□□ -0.583e-6■■■■■ 37.2
RPRD1B-201ENST00000373433 SDR42E2A6NKP2 422 aa11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 KPNA7A9QM74 516 aa11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 UGT1A9O60656 530 aa11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 KLHL2O95198 593 aa11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 LCP1P13796 627 aa11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 VARSP26640 1264 aaKnown RBP11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 PSMD7P51665 324 aa11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 RPL10AP62906 217 aaKnown RBP11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 CYP4A22Q5TCH4 519 aa11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 VWA5B1Q5TIE3 1220 aa11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 C16orf46Q6P387 395 aa11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 NCCRP1Q6ZVX7 275 aaPredicted RBP11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 RNF148Q8N7C7 305 aa11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 ZNF516Q92618 1163 aa11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 TMEM176AQ96HP8 235 aa11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 UGT1A7Q9HAW7 530 aa11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 UGT1A10Q9HAW8 530 aa11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 UGT1A8Q9HAW9 530 aa11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 CYP3A43Q9HB55 503 aa11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 PCDH18Q9HCL0 1135 aa11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 A0A1B0GTW7 788 aa11.42□□□□□ -0.58
RPRD1B-201ENST00000373433 SIN3BO75182 1162 aa11.42□□□□□ -0.58
RPRD1B-201ENST00000373433 TFPTP0C1Z6 253 aa11.42□□□□□ -0.58
RPRD1B-201ENST00000373433 MRPS5P82675 430 aaKnown RBP11.42□□□□□ -0.58
RPRD1B-201ENST00000373433 PDE1CQ14123 709 aaPredicted RBP11.42□□□□□ -0.58
RPRD1B-201ENST00000373433 FAXCQ5TGI0 409 aa11.42□□□□□ -0.58
RPRD1B-201ENST00000373433 LPCAT2Q7L5N7 544 aa11.42□□□□□ -0.58
RPRD1B-201ENST00000373433 C1orf127Q8N9H9 656 aa11.42□□□□□ -0.58
RPRD1B-201ENST00000373433 TRIM43BA6NCK2 446 aa11.42□□□□□ -0.58
RPRD1B-201ENST00000373433 CXorf49A8MYA2 514 aaPredicted RBP11.42□□□□□ -0.58
RPRD1B-201ENST00000373433 CFLARO15519 480 aa11.42□□□□□ -0.58
RPRD1B-201ENST00000373433 DCXO43602 365 aa11.42□□□□□ -0.58
RPRD1B-201ENST00000373433 KCNA4P22459 653 aa11.42□□□□□ -0.58
RPRD1B-201ENST00000373433 CDKN2BP42772 138 aa11.42□□□□□ -0.58
RPRD1B-201ENST00000373433 NR1H2P55055 460 aa11.42□□□□□ -0.58
RPRD1B-201ENST00000373433 NME3Q13232 169 aa11.42□□□□□ -0.58
RPRD1B-201ENST00000373433 IRF5Q13568 498 aa11.42□□□□□ -0.58
RPRD1B-201ENST00000373433 ADGRF2Q8IZF7 708 aa11.42□□□□□ -0.58
RPRD1B-201ENST00000373433 GIPC3Q8TF64 312 aa11.42□□□□□ -0.58
RPRD1B-201ENST00000373433 DCUN1D5Q9BTE7 237 aa11.42□□□□□ -0.58
RPRD1B-201ENST00000373433 RBM38Q9H0Z9 239 aaKnown RBP11.42□□□□□ -0.58
RPRD1B-201ENST00000373433 UNC93B1Q9H1C4 597 aa11.42□□□□□ -0.58
RPRD1B-201ENST00000373433 TSPYL2Q9H2G4 693 aaPredicted RBP11.42□□□□□ -0.58
RPRD1B-201ENST00000373433 TUBGCP4Q9UGJ1 667 aa11.42□□□□□ -0.58
RPRD1B-201ENST00000373433 BARX2Q9UMQ3 279 aaPredicted RBP11.42□□□□□ -0.58
RPRD1B-201ENST00000373433 SMIM28A0A1B0GU29 152 aa11.42□□□□□ -0.58
RPRD1B-201ENST00000373433 ZBTB42B2RXF5 422 aa11.42□□□□□ -0.58
RPRD1B-201ENST00000373433 AIM2O14862 343 aa11.42□□□□□ -0.58
RPRD1B-201ENST00000373433 ITM2AO43736 263 aa11.42□□□□□ -0.58
RPRD1B-201ENST00000373433 PIM1P11309 404 aaPredicted RBP11.42□□□□□ -0.58
RPRD1B-201ENST00000373433 PDPK2PQ6A1A2 396 aa11.42□□□□□ -0.58
RPRD1B-201ENST00000373433 PLEKHA7Q6IQ23 1121 aa11.42□□□□□ -0.58
RPRD1B-201ENST00000373433 FRMD7Q6ZUT3 714 aa11.42□□□□□ -0.58
RPRD1B-201ENST00000373433 SMYD1Q8NB12 490 aa11.42□□□□□ -0.58
RPRD1B-201ENST00000373433 PIWIL2Q8TC59 973 aaKnown RBP11.42□□□□□ -0.58
RPRD1B-201ENST00000373433 AGR3Q8TD06 166 aa11.42□□□□□ -0.58
RPRD1B-201ENST00000373433 DDI1Q8WTU0 396 aa11.42□□□□□ -0.58
RPRD1B-201ENST00000373433 GFM2Q969S9 779 aaKnown RBP11.42□□□□□ -0.58
RPRD1B-201ENST00000373433 FAF2Q96CS3 445 aa11.42□□□□□ -0.58
RPRD1B-201ENST00000373433 RSL24D1Q9UHA3 163 aaKnown RBP11.42□□□□□ -0.58
RPRD1B-201ENST00000373433 AP1G1O43747 822 aa11.41□□□□□ -0.58
RPRD1B-201ENST00000373433 CPB1P15086 417 aa11.41□□□□□ -0.58
RPRD1B-201ENST00000373433 CDH2P19022 906 aaPredicted RBP11.41□□□□□ -0.58
RPRD1B-201ENST00000373433 ITGAXP20702 1163 aa11.41□□□□□ -0.58
RPRD1B-201ENST00000373433 ACAT1P24752 427 aaKnown RBP11.41□□□□□ -0.58
RPRD1B-201ENST00000373433 PCSK1P29120 753 aa11.41□□□□□ -0.58
RPRD1B-201ENST00000373433 ENTPD1P49961 510 aa11.41□□□□□ -0.58
RPRD1B-201ENST00000373433 EIF3EP60228 445 aaKnown RBP11.41□□□□□ -0.58
RPRD1B-201ENST00000373433 WASHC5Q12768 1159 aa11.41□□□□□ -0.58
RPRD1B-201ENST00000373433 STILQ15468 1287 aa11.41□□□□□ -0.58
RPRD1B-201ENST00000373433 GOLGA7BQ2TAP0 167 aa11.41□□□□□ -0.58
RPRD1B-201ENST00000373433 TEX44Q53QW1 395 aa11.41□□□□□ -0.58
RPRD1B-201ENST00000373433 FBXW8Q8N3Y1 598 aa11.41□□□□□ -0.58
RPRD1B-201ENST00000373433 MCUQ8NE86 351 aa11.41□□□□□ -0.58
RPRD1B-201ENST00000373433 SLC35B2Q8TB61 432 aa11.41□□□□□ -0.58
RPRD1B-201ENST00000373433 ACTRT2Q8TDY3 377 aa11.41□□□□□ -0.58
RPRD1B-201ENST00000373433 PXYLP1Q8TE99 480 aa11.41□□□□□ -0.58
RPRD1B-201ENST00000373433 CMTM5Q96DZ9 223 aa11.41□□□□□ -0.58
RPRD1B-201ENST00000373433 NFKBIZQ9BYH8 718 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms