RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 ZSCAN5CA6NGD5 496 aaPredicted RBP6.7□□□□□ -1.34
CHD6-203ENST00000373233 NKRFO15226 690 aaKnown RBP eCLIP6.7□□□□□ -1.341e-8■■□□□ 11.6
CHD6-203ENST00000373233 IL4RP24394 825 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 RAB25P57735 213 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 SWI5Q1ZZU3 235 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 TTC39CQ8N584 583 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 PJA1Q8NG27 643 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 C12orf42Q96LP6 360 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 C11orf70Q9BRQ4 267 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 ZSCAN5AQ9BUG6 496 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 PIN4Q9Y237 131 aaKnown RBP6.7□□□□□ -1.34
CHD6-203ENST00000373233 SIPA1L1O43166 1804 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 PDPK1O15530 556 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 ATMINO43313 823 aaPredicted RBP6.7□□□□□ -1.34
CHD6-203ENST00000373233 KDM4BO94953 1096 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 C6orf222P0C671 652 aaPredicted RBP6.7□□□□□ -1.34
CHD6-203ENST00000373233 TSTA3Q13630 321 aaPredicted RBP6.7□□□□□ -1.34
CHD6-203ENST00000373233 ULK2Q8IYT8 1036 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 HSPBAP1Q96EW2 488 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 OTUB1Q96FW1 271 aaPredicted RBP6.7□□□□□ -1.34
CHD6-203ENST00000373233 POP1Q99575 1024 aaKnown RBP6.7□□□□□ -1.34
CHD6-203ENST00000373233 DMGDHQ9UI17 866 aaKnown RBP6.7□□□□□ -1.34
CHD6-203ENST00000373233 DGKBQ9Y6T7 804 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 SYNJ2BP-COX16A0A087WUM0 186 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 TRPC5OSA6NMA1 111 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 E9PBE3 544 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 CES2O00748 559 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 H2AFYO75367 372 aaKnown RBP6.7□□□□□ -1.34
CHD6-203ENST00000373233 IFNA7P01567 189 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 PRKAR1AP10644 381 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 RARBP10826 455 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 SVOPQ8N4V2 548 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 ASCC1Q8N9N2 400 aaKnown RBP6.7□□□□□ -1.34
CHD6-203ENST00000373233 APBB2Q92870 758 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 PGM2Q96G03 612 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 RBBP8Q99708 897 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 TTYH1Q9H313 450 aaPredicted RBP6.7□□□□□ -1.34
CHD6-203ENST00000373233 GDF3Q9NR23 364 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.7□□□□□ -1.34
CHD6-203ENST00000373233 COX16Q9P0S2 106 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 ZNF624Q9P2J8 865 aaPredicted RBP6.7□□□□□ -1.34
CHD6-203ENST00000373233 UVRAGQ9P2Y5 699 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 TMEM5Q9Y2B1 443 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 SLC15A5A6NIM6 579 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 ZNF879B4DU55 563 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 DDX3XO00571 662 aaKnown RBP eCLIP6.7□□□□□ -1.34
CHD6-203ENST00000373233 FBP2O00757 339 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 MGRN1O60291 552 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 SIN3BO75182 1162 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 TPPPO94811 219 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 LGALS2P05162 132 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 GRIK4Q16099 956 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 NOTUMQ6P988 496 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.7□□□□□ -1.34
CHD6-203ENST00000373233 KRT77Q7Z794 578 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 RYBPQ8N488 228 aaPredicted RBP6.7□□□□□ -1.34
CHD6-203ENST00000373233 TMC2Q8TDI7 906 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 DCLK3Q9C098 648 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 PORCNQ9H237 461 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 XKR8Q9H6D3 395 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 EFCAB1Q9HAE3 211 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 MKLN1Q9UL63 735 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 EFR3BQ9Y2G0 817 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 HTR3EA5X5Y0 456 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 CENPBD1B2RD01 187 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 I3L521 148 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 SSX5O60225 188 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 TYK2P29597 1187 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 RCVRNP35243 200 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 ZSWIM2Q8NEG5 633 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 ZHX1-C8orf76Q96EF9 292 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 KCTD10Q9H3F6 313 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 AP4B1Q9Y6B7 739 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 PSIP1O75475 530 aaKnown RBP6.7□□□□□ -1.34
CHD6-203ENST00000373233 ROR1Q01973 937 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 CENPCQ03188 943 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 ZNF267Q14586 743 aaPredicted RBP6.7□□□□□ -1.34
CHD6-203ENST00000373233 EPC2Q52LR7 807 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 GPR107Q5VW38 600 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 MPZL3Q6UWV2 235 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 FBXW8Q8N3Y1 598 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 TMEM35BQ8NCS4 154 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 C9orf16Q9BUW7 83 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 YIPF2Q9BWQ6 316 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 C17orf102A2RUQ5 167 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 OR7A10O76100 309 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 YBX3P16989 372 aaKnown RBP eCLIP6.7□□□□□ -1.34
CHD6-203ENST00000373233 EIF2S3P41091 472 aaKnown RBP6.7□□□□□ -1.34
CHD6-203ENST00000373233 MAGEA4P43358 317 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 ATP12AP54707 1039 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 SHQ1Q6PI26 577 aaKnown RBP6.7□□□□□ -1.34
CHD6-203ENST00000373233 DLK2Q6UY11 383 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 SFRP1Q8N474 314 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 DENND6BQ8NEG7 585 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 REPS2Q8NFH8 660 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 BHLHE22Q8NFJ8 381 aaPredicted RBP6.7□□□□□ -1.34
CHD6-203ENST00000373233 NIF3L1Q9GZT8 377 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 LRFN2Q9ULH4 789 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 PEX10O60683 326 aa6.7□□□□□ -1.34
CHD6-203ENST00000373233 FAM20BO75063 409 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms