RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 PSMB7Q99436 277 aa23.29■■□□□ 1.32
COL9A2-201ENST00000372736 MUC3BQ9H195 1237 aa23.29■■□□□ 1.32
COL9A2-201ENST00000372736 PABPC3Q9H361 631 aaKnown RBP23.29■■□□□ 1.32
COL9A2-201ENST00000372736 HAUS4Q9H6D7 363 aa23.29■■□□□ 1.32
COL9A2-201ENST00000372736 CNOT1A5YKK6 2376 aaKnown RBP23.29■■□□□ 1.32
COL9A2-201ENST00000372736 NCOR2Q9Y618 2525 aa23.28■■□□□ 1.32
COL9A2-201ENST00000372736 ADAMTS9Q9P2N4 1935 aa23.28■■□□□ 1.32
COL9A2-201ENST00000372736 SRGAP2O75044 1071 aa23.28■■□□□ 1.32
COL9A2-201ENST00000372736 RHOCP08134 193 aa23.28■■□□□ 1.32
COL9A2-201ENST00000372736 VAV1P15498 845 aa23.28■■□□□ 1.32
COL9A2-201ENST00000372736 ADRA1BP35368 520 aa23.28■■□□□ 1.32
COL9A2-201ENST00000372736 RPL7AP62424 266 aaKnown RBP23.28■■□□□ 1.32
COL9A2-201ENST00000372736 NRG1Q02297 640 aaPredicted RBP23.28■■□□□ 1.32
COL9A2-201ENST00000372736 DUOXA1Q1HG43 343 aa23.28■■□□□ 1.32
COL9A2-201ENST00000372736 MANEALQ5VSG8 457 aa23.28■■□□□ 1.32
COL9A2-201ENST00000372736 ZNF571Q7Z3V5 609 aaPredicted RBP23.28■■□□□ 1.32
COL9A2-201ENST00000372736 CCDC185Q8N715 623 aa23.28■■□□□ 1.32
COL9A2-201ENST00000372736 CEP76Q8TAP6 659 aa23.28■■□□□ 1.32
COL9A2-201ENST00000372736 NUSAP1Q9BXS6 441 aaKnown RBP23.28■■□□□ 1.32
COL9A2-201ENST00000372736 CAPN10Q9HC96 672 aa23.28■■□□□ 1.32
COL9A2-201ENST00000372736 SLC25A13Q9UJS0 675 aa23.28■■□□□ 1.32
COL9A2-201ENST00000372736 NEU3Q9UQ49 428 aa23.28■■□□□ 1.32
COL9A2-201ENST00000372736 MEI4A8MW99 385 aa23.27■■□□□ 1.32
COL9A2-201ENST00000372736 GOLGA6L19H0YKK7 550 aa23.27■■□□□ 1.32
COL9A2-201ENST00000372736 TM4SF5O14894 197 aa23.27■■□□□ 1.32
COL9A2-201ENST00000372736 CCP110O43303 1012 aa23.27■■□□□ 1.32
COL9A2-201ENST00000372736 ATP9BO43861 1147 aa23.27■■□□□ 1.32
COL9A2-201ENST00000372736 CFIP05156 583 aa23.27■■□□□ 1.32
COL9A2-201ENST00000372736 ACSL1P33121 698 aa23.27■■□□□ 1.32
COL9A2-201ENST00000372736 ZNF143P52747 638 aaPredicted RBP23.27■■□□□ 1.32
COL9A2-201ENST00000372736 UBASH3AP57075 661 aa23.27■■□□□ 1.32
COL9A2-201ENST00000372736 CST6Q15828 149 aa23.27■■□□□ 1.32
COL9A2-201ENST00000372736 ARL13BQ3SXY8 428 aa23.27■■□□□ 1.32
COL9A2-201ENST00000372736 WDR45BQ5MNZ6 344 aa23.27■■□□□ 1.32
COL9A2-201ENST00000372736 SYCP2LQ5T4T6 812 aa23.27■■□□□ 1.32
COL9A2-201ENST00000372736 PPP1R2P3Q6NXS1 205 aa23.27■■□□□ 1.32
COL9A2-201ENST00000372736 RABEPKQ7Z6M1 372 aa23.27■■□□□ 1.32
COL9A2-201ENST00000372736 STK40Q8N2I9 435 aa23.27■■□□□ 1.32
COL9A2-201ENST00000372736 DNASE2BQ8WZ79 361 aa23.27■■□□□ 1.32
COL9A2-201ENST00000372736 FAM129BQ96TA1 746 aa23.27■■□□□ 1.32
COL9A2-201ENST00000372736 ZYG11BQ9C0D3 744 aa23.27■■□□□ 1.32
COL9A2-201ENST00000372736 PCED1AQ9H1Q7 454 aa23.27■■□□□ 1.32
COL9A2-201ENST00000372736 PPARGC1AQ9UBK2 798 aaKnown RBP23.27■■□□□ 1.32
COL9A2-201ENST00000372736 SERGEFQ9UGK8 458 aa23.27■■□□□ 1.32
COL9A2-201ENST00000372736 SCML1Q9UN30 329 aa23.27■■□□□ 1.32
COL9A2-201ENST00000372736 CHD5Q8TDI0 1954 aa23.27■■□□□ 1.32
COL9A2-201ENST00000372736 A0A0D9SEW6 157 aa23.26■■□□□ 1.31
COL9A2-201ENST00000372736 C4orf47A7E2U8 309 aa23.26■■□□□ 1.31
COL9A2-201ENST00000372736 METTL12A8MUP2 240 aa23.26■■□□□ 1.31
COL9A2-201ENST00000372736 TMCO5BA8MYB1 307 aa23.26■■□□□ 1.31
COL9A2-201ENST00000372736 CDX4O14627 284 aaPredicted RBP23.26■■□□□ 1.31
COL9A2-201ENST00000372736 SNAP91O60641 907 aa23.26■■□□□ 1.31
COL9A2-201ENST00000372736 RNASEH1O60930 286 aaKnown RBP23.26■■□□□ 1.31
COL9A2-201ENST00000372736 SERPINF2P08697 491 aa23.26■■□□□ 1.31
COL9A2-201ENST00000372736 MAOBP27338 520 aa23.26■■□□□ 1.31
COL9A2-201ENST00000372736 NNMTP40261 264 aa23.26■■□□□ 1.31
COL9A2-201ENST00000372736 FOXK2Q01167 660 aa23.26■■□□□ 1.31
COL9A2-201ENST00000372736 ELAVL3Q14576 367 aaKnown RBP23.26■■□□□ 1.31
COL9A2-201ENST00000372736 C6orf118Q5T5N4 469 aa23.26■■□□□ 1.31
COL9A2-201ENST00000372736 DCAF12L1Q5VU92 463 aa23.26■■□□□ 1.31
COL9A2-201ENST00000372736 IL31Q6EBC2 164 aa23.26■■□□□ 1.31
COL9A2-201ENST00000372736 USP30Q70CQ3 517 aa23.26■■□□□ 1.31
COL9A2-201ENST00000372736 MMAAQ8IVH4 418 aaKnown RBP23.26■■□□□ 1.31
COL9A2-201ENST00000372736 RGL4Q8IZJ4 473 aa23.26■■□□□ 1.31
COL9A2-201ENST00000372736 SH2D3CQ8N5H7 860 aa23.26■■□□□ 1.31
COL9A2-201ENST00000372736 DCAF4L2Q8NA75 395 aa23.26■■□□□ 1.31
COL9A2-201ENST00000372736 NTAN1Q96AB6 310 aa23.26■■□□□ 1.31
COL9A2-201ENST00000372736 VCPIP1Q96JH7 1222 aa23.26■■□□□ 1.31
COL9A2-201ENST00000372736 MAGEB5Q9BZ81 275 aa23.26■■□□□ 1.31
COL9A2-201ENST00000372736 OSBPL2Q9H1P3 480 aa23.26■■□□□ 1.31
COL9A2-201ENST00000372736 C6orf106Q9H6K1 298 aaPredicted RBP23.26■■□□□ 1.31
COL9A2-201ENST00000372736 TMEM9BQ9NQ34 198 aa23.26■■□□□ 1.31
COL9A2-201ENST00000372736 FSCN3Q9NQT6 498 aa23.26■■□□□ 1.31
COL9A2-201ENST00000372736 OR12D3Q9UGF7 316 aa23.26■■□□□ 1.31
COL9A2-201ENST00000372736 VPS51Q9UID3 782 aa23.26■■□□□ 1.31
COL9A2-201ENST00000372736 HS3ST2Q9Y278 367 aa23.26■■□□□ 1.31
COL9A2-201ENST00000372736 A0A1W2PQJ5 194 aa23.25■■□□□ 1.31
COL9A2-201ENST00000372736 MED19A0JLT2 244 aaPredicted RBP23.25■■□□□ 1.31
COL9A2-201ENST00000372736 FAM72CH0Y354 149 aa23.25■■□□□ 1.31
COL9A2-201ENST00000372736 DDX3XO00571 662 aaKnown RBP eCLIP23.25■■□□□ 1.312e-6■■■□□ 18.6
COL9A2-201ENST00000372736 MID1O15344 667 aa23.25■■□□□ 1.31
COL9A2-201ENST00000372736 ATMINO43313 823 aaPredicted RBP23.25■■□□□ 1.31
COL9A2-201ENST00000372736 SEMA4FO95754 770 aa23.25■■□□□ 1.31
COL9A2-201ENST00000372736 ENGP17813 658 aa23.25■■□□□ 1.31
COL9A2-201ENST00000372736 OR1E1P30953 314 aa23.25■■□□□ 1.31
COL9A2-201ENST00000372736 PSMD8P48556 350 aa23.25■■□□□ 1.31
COL9A2-201ENST00000372736 KLHL30Q0D2K2 578 aa23.25■■□□□ 1.31
COL9A2-201ENST00000372736 SCAPQ12770 1279 aa23.25■■□□□ 1.31
COL9A2-201ENST00000372736 FAM72AQ5TYM5 149 aa23.25■■□□□ 1.31
COL9A2-201ENST00000372736 FAM72DQ6L9T8 149 aa23.25■■□□□ 1.31
COL9A2-201ENST00000372736 FAM72BQ86X60 149 aa23.25■■□□□ 1.31
COL9A2-201ENST00000372736 DNAAF5Q86Y56 855 aa23.25■■□□□ 1.31
COL9A2-201ENST00000372736 C2orf49Q9BVC5 232 aaPredicted RBP23.25■■□□□ 1.31
COL9A2-201ENST00000372736 BTBD1Q9H0C5 482 aa23.25■■□□□ 1.31
COL9A2-201ENST00000372736 SUSD2Q9UGT4 822 aa23.25■■□□□ 1.31
COL9A2-201ENST00000372736 SLC6A14Q9UN76 642 aa23.25■■□□□ 1.31
COL9A2-201ENST00000372736 ILVBLA1L0T0 632 aa23.24■■□□□ 1.31
COL9A2-201ENST00000372736 ANKRD62A6NC57 917 aa23.24■■□□□ 1.31
COL9A2-201ENST00000372736 GZMAP12544 262 aa23.24■■□□□ 1.31
COL9A2-201ENST00000372736 SKILP12757 684 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms