RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 MANEALQ5VSG8 457 aa20.28■□□□□ 0.84
LHX3-202ENST00000371748 MON1AQ86VX9 555 aa20.28■□□□□ 0.84
LHX3-202ENST00000371748 ARHGAP12Q8IWW6 846 aa20.28■□□□□ 0.84
LHX3-202ENST00000371748 DNAAF3Q8N9W5 541 aa20.28■□□□□ 0.84
LHX3-202ENST00000371748 PTPRN2Q92932 1015 aa20.28■□□□□ 0.84
LHX3-202ENST00000371748 TEKT5Q96M29 485 aa20.28■□□□□ 0.84
LHX3-202ENST00000371748 SERPINB11Q96P15 392 aa20.28■□□□□ 0.84
LHX3-202ENST00000371748 SLC13A1Q9BZW2 595 aa20.28■□□□□ 0.84
LHX3-202ENST00000371748 UNC93B1Q9H1C4 597 aa20.28■□□□□ 0.84
LHX3-202ENST00000371748 HS3ST4Q9Y661 456 aa20.28■□□□□ 0.84
LHX3-202ENST00000371748 ALDH2P05091 517 aa20.28■□□□□ 0.84
LHX3-202ENST00000371748 DHRS4L1P0CG22 281 aa20.28■□□□□ 0.84
LHX3-202ENST00000371748 NIPAL4Q0D2K0 466 aa20.28■□□□□ 0.84
LHX3-202ENST00000371748 MRPL58Q14197 206 aaKnown RBP20.28■□□□□ 0.84
LHX3-202ENST00000371748 KCTD11Q693B1 232 aa20.28■□□□□ 0.84
LHX3-202ENST00000371748 ITPRIPL1Q6GPH6 555 aa20.28■□□□□ 0.84
LHX3-202ENST00000371748 ZNF280DQ6N043 979 aa20.28■□□□□ 0.84
LHX3-202ENST00000371748 CYS1Q717R9 158 aa20.28■□□□□ 0.84
LHX3-202ENST00000371748 OTOAQ7RTW8 1153 aa20.28■□□□□ 0.84
LHX3-202ENST00000371748 C14orf80Q86SX3 495 aa20.28■□□□□ 0.84
LHX3-202ENST00000371748 CCNJLQ8IV13 435 aa20.28■□□□□ 0.84
LHX3-202ENST00000371748 IQCGQ9H095 443 aaKnown RBP20.28■□□□□ 0.84
LHX3-202ENST00000371748 VPS11Q9H270 941 aa20.28■□□□□ 0.84
LHX3-202ENST00000371748 BATF3Q9NR55 127 aa20.28■□□□□ 0.84
LHX3-202ENST00000371748 MPP6Q9NZW5 540 aa20.28■□□□□ 0.84
LHX3-202ENST00000371748 SLC27A5Q9Y2P5 690 aa20.28■□□□□ 0.84
LHX3-202ENST00000371748 RPS6KL1Q9Y6S9 549 aa20.28■□□□□ 0.84
LHX3-202ENST00000371748 NYNRINQ9P2P1 1898 aaKnown RBP20.27■□□□□ 0.84
LHX3-202ENST00000371748 KCNU1A8MYU2 1149 aa20.27■□□□□ 0.84
LHX3-202ENST00000371748 CPB1P15086 417 aa20.27■□□□□ 0.84
LHX3-202ENST00000371748 APLP1P51693 650 aa20.27■□□□□ 0.84
LHX3-202ENST00000371748 OTOP3Q7RTS5 596 aa20.27■□□□□ 0.84
LHX3-202ENST00000371748 CNTD1Q8N815 330 aa20.27■□□□□ 0.84
LHX3-202ENST00000371748 UTP4Q969X6 686 aaKnown RBP20.27■□□□□ 0.84
LHX3-202ENST00000371748 MTBPQ96DY7 904 aa20.27■□□□□ 0.84
LHX3-202ENST00000371748 SCLYQ96I15 445 aa20.27■□□□□ 0.84
LHX3-202ENST00000371748 VAT1Q99536 393 aa20.27■□□□□ 0.84
LHX3-202ENST00000371748 FBXO44Q9H4M3 255 aa20.27■□□□□ 0.84
LHX3-202ENST00000371748 MANSC1Q9H8J5 431 aa20.27■□□□□ 0.84
LHX3-202ENST00000371748 PCMTD2Q9NV79 361 aa20.27■□□□□ 0.84
LHX3-202ENST00000371748 VANGL2Q9ULK5 521 aa20.27■□□□□ 0.84
LHX3-202ENST00000371748 TRIM17Q9Y577 477 aa20.27■□□□□ 0.84
LHX3-202ENST00000371748 PQBP1O60828 265 aaKnown RBP20.27■□□□□ 0.83
LHX3-202ENST00000371748 HOXC13P31276 330 aa20.27■□□□□ 0.83
LHX3-202ENST00000371748 TUBP50607 506 aa20.27■□□□□ 0.83
LHX3-202ENST00000371748 COG7P83436 770 aa20.27■□□□□ 0.83
LHX3-202ENST00000371748 RSPO2Q6UXX9 243 aaPredicted RBP20.27■□□□□ 0.83
LHX3-202ENST00000371748 MARK2Q7KZI7 788 aaKnown RBP20.27■□□□□ 0.83
LHX3-202ENST00000371748 ATPAF2Q8N5M1 289 aa20.27■□□□□ 0.83
LHX3-202ENST00000371748 SEPT8Q92599 483 aa20.27■□□□□ 0.83
LHX3-202ENST00000371748 FCRL3Q96P31 734 aaPredicted RBP20.27■□□□□ 0.83
LHX3-202ENST00000371748 NAT9Q9BTE0 207 aa20.27■□□□□ 0.83
LHX3-202ENST00000371748 SLC39A8Q9C0K1 460 aa20.27■□□□□ 0.83
LHX3-202ENST00000371748 CATSPERBQ9H7T0 1116 aa20.27■□□□□ 0.83
LHX3-202ENST00000371748 PSAT1Q9Y617 370 aa20.27■□□□□ 0.83
LHX3-202ENST00000371748 E9PAM4 449 aa20.26■□□□□ 0.83
LHX3-202ENST00000371748 FGF10O15520 208 aaPredicted RBP20.26■□□□□ 0.83
LHX3-202ENST00000371748 POLBP06746 335 aa20.26■□□□□ 0.83
LHX3-202ENST00000371748 ERVK-10P10266 1014 aa20.26■□□□□ 0.83
LHX3-202ENST00000371748 SERPINB9P50453 376 aa20.26■□□□□ 0.83
LHX3-202ENST00000371748 HTRA3P83110 453 aa20.26■□□□□ 0.83
LHX3-202ENST00000371748 TMEM173Q86WV6 379 aaPredicted RBP20.26■□□□□ 0.83
LHX3-202ENST00000371748 CDKL2Q92772 493 aa20.26■□□□□ 0.83
LHX3-202ENST00000371748 CRISPLD1Q9H336 500 aa20.26■□□□□ 0.83
LHX3-202ENST00000371748 CASS4Q9NQ75 786 aa20.26■□□□□ 0.83
LHX3-202ENST00000371748 FGFR3P22607 806 aa20.26■□□□□ 0.83
LHX3-202ENST00000371748 CCNFP41002 786 aa20.26■□□□□ 0.83
LHX3-202ENST00000371748 MAGEA11P43364 429 aa20.26■□□□□ 0.83
LHX3-202ENST00000371748 RTP2Q5QGT7 225 aa20.26■□□□□ 0.83
LHX3-202ENST00000371748 CERCAMQ5T4B2 595 aa20.26■□□□□ 0.83
LHX3-202ENST00000371748 PIK3R6Q5UE93 754 aa20.26■□□□□ 0.83
LHX3-202ENST00000371748 FUT10Q6P4F1 479 aa20.26■□□□□ 0.83
LHX3-202ENST00000371748 ZNF419Q96HQ0 510 aaPredicted RBP20.26■□□□□ 0.83
LHX3-202ENST00000371748 BFARQ9NZS9 450 aa20.26■□□□□ 0.83
LHX3-202ENST00000371748 ATP9BO43861 1147 aa20.25■□□□□ 0.83
LHX3-202ENST00000371748 TBX18O95935 607 aa20.25■□□□□ 0.83
LHX3-202ENST00000371748 CCNCP24863 283 aa20.25■□□□□ 0.83
LHX3-202ENST00000371748 EFEMP1Q12805 493 aa20.25■□□□□ 0.83
LHX3-202ENST00000371748 PACS1Q6VY07 963 aa20.25■□□□□ 0.83
LHX3-202ENST00000371748 RASSF3Q86WH2 238 aa20.25■□□□□ 0.83
LHX3-202ENST00000371748 NDUFAF2Q8N183 169 aa20.25■□□□□ 0.83
LHX3-202ENST00000371748 ZNF669Q96BR6 464 aaPredicted RBP20.25■□□□□ 0.83
LHX3-202ENST00000371748 SEPT5Q99719 369 aaPredicted RBP20.25■□□□□ 0.83
LHX3-202ENST00000371748 TLR6Q9Y2C9 796 aa20.25■□□□□ 0.83
LHX3-202ENST00000371748 PLLPQ9Y342 182 aa20.25■□□□□ 0.83
LHX3-202ENST00000371748 OR6C75A6NL08 312 aa20.24■□□□□ 0.83
LHX3-202ENST00000371748 ERI2A8K979 691 aaKnown RBP20.24■□□□□ 0.83
LHX3-202ENST00000371748 TOP3BO95985 862 aaKnown RBP20.24■□□□□ 0.83
LHX3-202ENST00000371748 NEFHP12036 1026 aa20.24■□□□□ 0.83
LHX3-202ENST00000371748 TPH1P17752 444 aa20.24■□□□□ 0.83
LHX3-202ENST00000371748 BGNP21810 368 aa20.24■□□□□ 0.83
LHX3-202ENST00000371748 SERPINB4P48594 390 aa20.24■□□□□ 0.83
LHX3-202ENST00000371748 CCNG1P51959 295 aa20.24■□□□□ 0.83
LHX3-202ENST00000371748 MGAT5BQ3V5L5 792 aa20.24■□□□□ 0.83
LHX3-202ENST00000371748 RNF19BQ6ZMZ0 732 aa20.24■□□□□ 0.83
LHX3-202ENST00000371748 FBXO32Q969P5 355 aa20.24■□□□□ 0.83
LHX3-202ENST00000371748 CERS2Q96G23 380 aa20.24■□□□□ 0.83
LHX3-202ENST00000371748 SLC39A13Q96H72 371 aa20.24■□□□□ 0.83
LHX3-202ENST00000371748 LRRC40Q9H9A6 602 aa20.24■□□□□ 0.83
LHX3-202ENST00000371748 GREB1Q4ZG55 1949 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms