RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 PTPN1P18031 435 aaKnown RBP11.98□□□□□ -0.49
PTPN1-201ENST00000371621 MPSTP25325 297 aa11.98□□□□□ -0.49
PTPN1-201ENST00000371621 IDH3AP50213 366 aa11.98□□□□□ -0.49
PTPN1-201ENST00000371621 CYP4F2P78329 520 aa11.98□□□□□ -0.49
PTPN1-201ENST00000371621 CYP4F3Q08477 520 aa11.98□□□□□ -0.49
PTPN1-201ENST00000371621 AP3B2Q13367 1082 aa11.98□□□□□ -0.49
PTPN1-201ENST00000371621 NFYCQ13952 458 aa11.98□□□□□ -0.49
PTPN1-201ENST00000371621 C15orf59Q2T9L4 293 aaPredicted RBP11.98□□□□□ -0.49
PTPN1-201ENST00000371621 SNRNP48Q6IEG0 339 aaKnown RBP11.98□□□□□ -0.49
PTPN1-201ENST00000371621 KYAT3Q6YP21 454 aaKnown RBP11.98□□□□□ -0.49
PTPN1-201ENST00000371621 CDHR3Q6ZTQ4 885 aa11.98□□□□□ -0.49
PTPN1-201ENST00000371621 CPNE9Q8IYJ1 553 aa11.98□□□□□ -0.49
PTPN1-201ENST00000371621 ZNF781Q8N8C0 355 aa11.98□□□□□ -0.49
PTPN1-201ENST00000371621 DENND1AQ8TEH3 1009 aa11.98□□□□□ -0.49
PTPN1-201ENST00000371621 FBXL20Q96IG2 436 aa11.98□□□□□ -0.49
PTPN1-201ENST00000371621 VPS39Q96JC1 886 aa11.98□□□□□ -0.49
PTPN1-201ENST00000371621 GLT1D1Q96MS3 346 aa11.98□□□□□ -0.49
PTPN1-201ENST00000371621 RTKNQ9BST9 563 aa11.98□□□□□ -0.49
PTPN1-201ENST00000371621 ZSCAN5AQ9BUG6 496 aa11.98□□□□□ -0.49
PTPN1-201ENST00000371621 THUMPD3Q9BV44 507 aaKnown RBP11.98□□□□□ -0.49
PTPN1-201ENST00000371621 ZNF358Q9NW07 568 aa11.98□□□□□ -0.49
PTPN1-201ENST00000371621 RBAKQ9NYW8 714 aaPredicted RBP11.98□□□□□ -0.49
PTPN1-201ENST00000371621 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.98□□□□□ -0.49
PTPN1-201ENST00000371621 ZNF536O15090 1300 aa11.98□□□□□ -0.49
PTPN1-201ENST00000371621 UBAP1LF5GYI3 381 aa11.98□□□□□ -0.49
PTPN1-201ENST00000371621 H0YC42 278 aa11.98□□□□□ -0.49
PTPN1-201ENST00000371621 DFFAO00273 331 aa11.98□□□□□ -0.49
PTPN1-201ENST00000371621 TGFB1I1O43294 461 aa11.98□□□□□ -0.49
PTPN1-201ENST00000371621 F7P08709 466 aaPredicted RBP11.98□□□□□ -0.49
PTPN1-201ENST00000371621 SDC4P31431 198 aa11.98□□□□□ -0.49
PTPN1-201ENST00000371621 PPP1R8Q12972 351 aaKnown RBP11.98□□□□□ -0.49
PTPN1-201ENST00000371621 MSLNQ13421 630 aaPredicted RBP11.98□□□□□ -0.49
PTPN1-201ENST00000371621 SAMD4BQ5PRF9 694 aaKnown RBP11.98□□□□□ -0.49
PTPN1-201ENST00000371621 EFL1Q7Z2Z2 1120 aaKnown RBP11.98□□□□□ -0.49
PTPN1-201ENST00000371621 SHCBP1Q8NEM2 672 aa11.98□□□□□ -0.49
PTPN1-201ENST00000371621 OR6P1Q8NGX9 317 aa11.98□□□□□ -0.49
PTPN1-201ENST00000371621 TRPC4APQ8TEL6 797 aa11.98□□□□□ -0.49
PTPN1-201ENST00000371621 SLC44A1Q8WWI5 657 aa11.98□□□□□ -0.49
PTPN1-201ENST00000371621 S100ZQ8WXG8 99 aa11.98□□□□□ -0.49
PTPN1-201ENST00000371621 CPT1BQ92523 772 aa11.98□□□□□ -0.49
PTPN1-201ENST00000371621 TMEM8AQ9HCN3 771 aa11.98□□□□□ -0.49
PTPN1-201ENST00000371621 PRPF19Q9UMS4 504 aaKnown RBP11.98□□□□□ -0.49
PTPN1-201ENST00000371621 U3KQV3 271 aa11.98□□□□□ -0.49
PTPN1-201ENST00000371621 SLIT1O75093 1534 aa11.98□□□□□ -0.49
PTPN1-201ENST00000371621 ENDOUP21128 410 aaKnown RBP11.98□□□□□ -0.49
PTPN1-201ENST00000371621 KLRK1P26718 216 aa11.98□□□□□ -0.49
PTPN1-201ENST00000371621 CRKLP46109 303 aaKnown RBP11.98□□□□□ -0.49
PTPN1-201ENST00000371621 KRR1Q13601 381 aaKnown RBP11.98□□□□□ -0.49
PTPN1-201ENST00000371621 SMUG1Q53HV7 270 aa11.98□□□□□ -0.49
PTPN1-201ENST00000371621 ANGPTL8Q6UXH0 198 aa11.98□□□□□ -0.49
PTPN1-201ENST00000371621 C8orf59Q8N0T1 100 aaPredicted RBP11.98□□□□□ -0.49
PTPN1-201ENST00000371621 PPP1R16BQ96T49 567 aa11.98□□□□□ -0.49
PTPN1-201ENST00000371621 YME1L1Q96TA2 773 aa11.98□□□□□ -0.49
PTPN1-201ENST00000371621 BDH2Q9BUT1 245 aa11.98□□□□□ -0.49
PTPN1-201ENST00000371621 AVENQ9NQS1 362 aaPredicted RBP11.98□□□□□ -0.49
PTPN1-201ENST00000371621 BTG4Q9NY30 223 aa11.98□□□□□ -0.49
PTPN1-201ENST00000371621 OGDHLQ9ULD0 1010 aa11.98□□□□□ -0.49
PTPN1-201ENST00000371621 PDE4DIPQ5VU43 2346 aa11.97□□□□□ -0.49
PTPN1-201ENST00000371621 TMEM150BA6NC51 233 aa11.97□□□□□ -0.49
PTPN1-201ENST00000371621 CCDC182A6NF36 153 aa11.97□□□□□ -0.49
PTPN1-201ENST00000371621 RNF103O00237 685 aa11.97□□□□□ -0.49
PTPN1-201ENST00000371621 BTN3A3O00478 584 aa11.97□□□□□ -0.49
PTPN1-201ENST00000371621 MSH4O15457 936 aa11.97□□□□□ -0.49
PTPN1-201ENST00000371621 CLPXO76031 633 aa11.97□□□□□ -0.49
PTPN1-201ENST00000371621 PRKD3O94806 890 aa11.97□□□□□ -0.49
PTPN1-201ENST00000371621 CRYZL1O95825 349 aa11.97□□□□□ -0.49
PTPN1-201ENST00000371621 IDO1P14902 403 aa11.97□□□□□ -0.49
PTPN1-201ENST00000371621 RBL1P28749 1068 aa11.97□□□□□ -0.49
PTPN1-201ENST00000371621 YWHAEP62258 255 aaKnown RBP11.97□□□□□ -0.49
PTPN1-201ENST00000371621 CDKL1Q00532 357 aa11.97□□□□□ -0.49
PTPN1-201ENST00000371621 CLCQ05315 142 aa11.97□□□□□ -0.49
PTPN1-201ENST00000371621 TRIM32Q13049 653 aa11.97□□□□□ -0.49
PTPN1-201ENST00000371621 PPP1R3AQ16821 1122 aa11.97□□□□□ -0.49
PTPN1-201ENST00000371621 DOK7Q18PE1 504 aa11.97□□□□□ -0.49
PTPN1-201ENST00000371621 MSS51Q4VC12 460 aa11.97□□□□□ -0.49
PTPN1-201ENST00000371621 PIWIL3Q7Z3Z3 882 aaKnown RBP11.97□□□□□ -0.49
PTPN1-201ENST00000371621 ANKS1BQ7Z6G8 1248 aa11.97□□□□□ -0.49
PTPN1-201ENST00000371621 PHC2Q8IXK0 858 aa11.97□□□□□ -0.49
PTPN1-201ENST00000371621 GALNT12Q8IXK2 581 aa11.97□□□□□ -0.49
PTPN1-201ENST00000371621 TTLL6Q8N841 843 aa11.97□□□□□ -0.49
PTPN1-201ENST00000371621 CANT1Q8WVQ1 401 aa11.97□□□□□ -0.49
PTPN1-201ENST00000371621 DDX43Q9NXZ2 648 aaKnown RBP11.97□□□□□ -0.49
PTPN1-201ENST00000371621 N6AMT1Q9Y5N5 214 aa11.97□□□□□ -0.49
PTPN1-201ENST00000371621 CEPT1Q9Y6K0 416 aa11.97□□□□□ -0.49
PTPN1-201ENST00000371621 PEAK1Q9H792 1746 aa11.97□□□□□ -0.49
PTPN1-201ENST00000371621 E5RI56 91 aa11.97□□□□□ -0.49
PTPN1-201ENST00000371621 TCEA3O75764 348 aa11.97□□□□□ -0.49
PTPN1-201ENST00000371621 FBXO21O94952 628 aa11.97□□□□□ -0.49
PTPN1-201ENST00000371621 HNRNPLP14866 589 aaKnown RBP eCLIP11.97□□□□□ -0.49
PTPN1-201ENST00000371621 GNG2P59768 71 aa11.97□□□□□ -0.49
PTPN1-201ENST00000371621 ZNF543Q08ER8 600 aa11.97□□□□□ -0.49
PTPN1-201ENST00000371621 CCDC142Q17RM4 750 aa11.97□□□□□ -0.49
PTPN1-201ENST00000371621 ZCCHC8Q6NZY4 707 aaKnown RBP11.97□□□□□ -0.49
PTPN1-201ENST00000371621 Q6ZNX1 250 aa11.97□□□□□ -0.49
PTPN1-201ENST00000371621 ENOSF1Q7L5Y1 443 aa11.97□□□□□ -0.49
PTPN1-201ENST00000371621 OR8H1Q8NGG4 311 aa11.97□□□□□ -0.49
PTPN1-201ENST00000371621 RP9Q8TA86 221 aaKnown RBP11.97□□□□□ -0.49
PTPN1-201ENST00000371621 KCTD4Q8WVF5 259 aa11.97□□□□□ -0.49
PTPN1-201ENST00000371621 PMEPA1Q969W9 287 aa11.97□□□□□ -0.49
PTPN1-201ENST00000371621 MOCOSQ96EN8 888 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms