RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 DAB1O75553 588 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 ALOX15P16050 662 aaPredicted RBP12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 ATP5F1P24539 256 aaPredicted RBP12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 ARL2P36404 184 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 CLCN5P51795 746 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 MRPS5P82675 430 aaKnown RBP12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 HPCAP84074 193 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 BEX3Q00994 111 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 CNTN1Q12860 1018 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 ZC3H12AQ5D1E8 599 aaKnown RBP12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 METTL6Q8TCB7 284 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 BSNDQ8WZ55 320 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 BDH2Q9BUT1 245 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 SELENONQ9NZV5 590 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 UXTQ9UBK9 157 aaPredicted RBP12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 PCDHGC3Q9UN70 934 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 MGAT4DA6NG13 374 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 TTLL13PA6NNM8 815 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 IFNA14P01570 189 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 CCNB1P14635 433 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 NFKB1P19838 968 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 PIK3CGP48736 1102 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 RAP1GDS1P52306 607 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 CACNA2D1P54289 1103 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 NAA20P61599 178 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 MRPS6P82932 125 aaKnown RBP12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 IYDQ6PHW0 289 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 MON1BQ7L1V2 547 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 GLT6D1Q7Z4J2 308 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 MIER2Q8N344 545 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 PPTC7Q8NI37 304 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 COMMD8Q9NX08 183 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 DPP7Q9UHL4 492 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 ZNF711Q9Y462 761 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 TBKBP1A7MCY6 615 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 M0R2N6 131 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 LTA4HP09960 611 aaKnown RBP12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 FAM58BPP0C7Q3 252 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 GOT1P17174 413 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 CAMK2GQ13555 558 aaPredicted RBP12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 TP53BP2Q13625 1128 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 PPP1R26Q5T8A7 1209 aaPredicted RBP12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 TERB1Q8NA31 727 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 C12orf50Q8NA57 414 aaPredicted RBP12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 PWWP2AQ96N64 755 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 PANX3Q96QZ0 392 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 ACOX2Q99424 681 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 ZNF184Q99676 751 aaPredicted RBP12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 KCTD14Q9BQ13 255 aaPredicted RBP12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 DUSP16Q9BY84 665 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 UNKQ9C0B0 810 aaKnown RBP12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 LNPEPQ9UIQ6 1025 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 RABGEF1Q9UJ41 708 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 COG5Q9UP83 839 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 ABCC6O95255 1503 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 CARNS1A5YM72 827 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 YDJCA8MPS7 323 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 HLA-DPA1P20036 260 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 FLT3P36888 993 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 WASHC5Q12768 1159 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 MAP2K5Q13163 448 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 FAM98BQ52LJ0 330 aaKnown RBP12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 TCHHL1Q5QJ38 904 aaPredicted RBP12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 ACBD5Q5T8D3 534 aaPredicted RBP12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 RIPOR1Q6ZS17 1223 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 STAG3L4Q8TBR4 150 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 USP6NLQ92738 828 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 YME1L1Q96TA2 773 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 LRRC4CQ9HCJ2 640 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 EXOSC4Q9NPD3 245 aaKnown RBP12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 H2AFY2Q9P0M6 372 aaPredicted RBP12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 TNPO3Q9Y5L0 923 aaKnown RBP12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 LMO7Q8WWI1 1683 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 FAM237BA0A1B0GVD1 139 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 SYNCRIPO60506 623 aaKnown RBP12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 CILPO75339 1184 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 ARIH2O95376 493 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 PSMG1O95456 288 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 ITGA2BP08514 1039 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 ATP5C1P36542 298 aaKnown RBP12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 HALP42357 657 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 HK2P52789 917 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 OASLQ15646 514 aaKnown RBP12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 SLC25A52Q3SY17 297 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 DUSP28Q4G0W2 176 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 CXCL17Q6UXB2 119 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 FAM126BQ8IXS8 530 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 C12orf29Q8N999 325 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 GDPD5Q8WTR4 605 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 FAXDC2Q96IV6 333 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 POMKQ9H5K3 350 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 CDV3Q9UKY7 258 aaKnown RBP12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 GIT1Q9Y2X7 761 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 MAFBQ9Y5Q3 323 aaPredicted RBP12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 VIRMAQ69YN4 1812 aaKnown RBP12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 HDAC3O15379 428 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 ZNF862O60290 1169 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 MLNP12872 115 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 SLC2A4P14672 509 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 DEFA1P59665 94 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms