RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 RPRD1AQ96P16 312 aaPredicted RBP13.55□□□□□ -0.24
RPF1-201ENST00000370654 PSMB7Q99436 277 aa13.55□□□□□ -0.24
RPF1-201ENST00000370654 CDC6Q99741 560 aa13.55□□□□□ -0.24
RPF1-201ENST00000370654 FEM1AQ9BSK4 669 aa13.55□□□□□ -0.24
RPF1-201ENST00000370654 TRIM62Q9BVG3 475 aa13.55□□□□□ -0.24
RPF1-201ENST00000370654 ACE2Q9BYF1 805 aaPredicted RBP13.55□□□□□ -0.24
RPF1-201ENST00000370654 AASDHPPTQ9NRN7 309 aa13.55□□□□□ -0.24
RPF1-201ENST00000370654 PIGVQ9NUD9 493 aa13.55□□□□□ -0.24
RPF1-201ENST00000370654 ASNSD1Q9NWL6 643 aa13.55□□□□□ -0.24
RPF1-201ENST00000370654 ARHGAP20Q9P2F6 1191 aa13.55□□□□□ -0.24
RPF1-201ENST00000370654 FZD4Q9ULV1 537 aa13.55□□□□□ -0.24
RPF1-201ENST00000370654 LHX6Q9UPM6 363 aa13.55□□□□□ -0.24
RPF1-201ENST00000370654 CA5BQ9Y2D0 317 aa13.55□□□□□ -0.24
RPF1-201ENST00000370654 A0A1B0GVM2 712 aa13.54□□□□□ -0.24
RPF1-201ENST00000370654 GTPBP10A4D1E9 387 aaKnown RBP13.54□□□□□ -0.24
RPF1-201ENST00000370654 TCAF2A6NFQ2 919 aa13.54□□□□□ -0.24
RPF1-201ENST00000370654 LRRC72A6NJI9 287 aa13.54□□□□□ -0.24
RPF1-201ENST00000370654 K7ERQ8 282 aa13.54□□□□□ -0.24
RPF1-201ENST00000370654 M0QYT0 321 aa13.54□□□□□ -0.24
RPF1-201ENST00000370654 TNFSF14O43557 240 aa13.54□□□□□ -0.24
RPF1-201ENST00000370654 SNAP91O60641 907 aa13.54□□□□□ -0.24
RPF1-201ENST00000370654 HSF2BPO75031 334 aa13.54□□□□□ -0.24
RPF1-201ENST00000370654 DAB1O75553 588 aa13.54□□□□□ -0.24
RPF1-201ENST00000370654 FGFR1OPO95684 399 aaKnown RBP13.54□□□□□ -0.24
RPF1-201ENST00000370654 CTSLP07711 333 aa13.54□□□□□ -0.24
RPF1-201ENST00000370654 GLI1P08151 1106 aa13.54□□□□□ -0.24
RPF1-201ENST00000370654 ABCB4P21439 1286 aa13.54□□□□□ -0.24
RPF1-201ENST00000370654 MAT2AP31153 395 aaKnown RBP13.54□□□□□ -0.24
RPF1-201ENST00000370654 MTIF2P46199 727 aaKnown RBP13.54□□□□□ -0.24
RPF1-201ENST00000370654 CCR5P51681 352 aa13.54□□□□□ -0.24
RPF1-201ENST00000370654 C21orf59P57076 290 aa13.54□□□□□ -0.24
RPF1-201ENST00000370654 SLC6A3Q01959 620 aa13.54□□□□□ -0.24
RPF1-201ENST00000370654 BNIP3Q12983 259 aa13.54□□□□□ -0.24
RPF1-201ENST00000370654 ELAVL3Q14576 367 aaKnown RBP13.54□□□□□ -0.24
RPF1-201ENST00000370654 SUZ12Q15022 739 aaKnown RBP13.54□□□□□ -0.24
RPF1-201ENST00000370654 EFHC1Q5JVL4 640 aa13.54□□□□□ -0.24
RPF1-201ENST00000370654 TRNP1Q6NT89 227 aa13.54□□□□□ -0.24
RPF1-201ENST00000370654 DHRS13Q6UX07 377 aa13.54□□□□□ -0.24
RPF1-201ENST00000370654 Q6ZVU0 165 aa13.54□□□□□ -0.24
RPF1-201ENST00000370654 SPATS2Q86XZ4 545 aaKnown RBP13.54□□□□□ -0.24
RPF1-201ENST00000370654 ELF4Q99607 663 aaPredicted RBP13.54□□□□□ -0.24
RPF1-201ENST00000370654 SIK2Q9H0K1 926 aa13.54□□□□□ -0.24
RPF1-201ENST00000370654 GPSM3Q9Y4H4 160 aa13.54□□□□□ -0.24
RPF1-201ENST00000370654 CACNA1GO43497 2377 aa13.54□□□□□ -0.24
RPF1-201ENST00000370654 ADAMTS20P59510 1910 aa13.53□□□□□ -0.24
RPF1-201ENST00000370654 TBC1D3DA0A087WVF3 549 aa13.53□□□□□ -0.24
RPF1-201ENST00000370654 TBC1D3IA0A087WXS9 549 aa13.53□□□□□ -0.24
RPF1-201ENST00000370654 TBC1D3EA0A087X179 549 aa13.53□□□□□ -0.24
RPF1-201ENST00000370654 TBC1D3KA0A087X1G2 549 aa13.53□□□□□ -0.24
RPF1-201ENST00000370654 TBC1D3FA6NER0 549 aaPredicted RBP13.53□□□□□ -0.24
RPF1-201ENST00000370654 TBC1D3LB9A6J9 549 aa13.53□□□□□ -0.24
RPF1-201ENST00000370654 LATO43561 262 aa13.53□□□□□ -0.24
RPF1-201ENST00000370654 ATP9BO43861 1147 aa13.53□□□□□ -0.24
RPF1-201ENST00000370654 ADH1BP00325 375 aa13.53□□□□□ -0.24
RPF1-201ENST00000370654 TBC1D3HP0C7X1 549 aa13.53□□□□□ -0.24
RPF1-201ENST00000370654 CD38P28907 300 aa13.53□□□□□ -0.24
RPF1-201ENST00000370654 GRK6P43250 576 aa13.53□□□□□ -0.24
RPF1-201ENST00000370654 RNASE9P60153 205 aaKnown RBP13.53□□□□□ -0.24
RPF1-201ENST00000370654 UBE2HP62256 183 aa13.53□□□□□ -0.24
RPF1-201ENST00000370654 PTK2Q05397 1052 aa13.53□□□□□ -0.24
RPF1-201ENST00000370654 CNTN1Q12860 1018 aa13.53□□□□□ -0.24
RPF1-201ENST00000370654 DNAJC3Q13217 504 aa13.53□□□□□ -0.24
RPF1-201ENST00000370654 SLC12A1Q13621 1099 aa13.53□□□□□ -0.24
RPF1-201ENST00000370654 DLG2Q15700 870 aa13.53□□□□□ -0.24
RPF1-201ENST00000370654 DPCR1Q3MIW9 517 aa13.53□□□□□ -0.24
RPF1-201ENST00000370654 C5orf22Q49AR2 442 aa13.53□□□□□ -0.24
RPF1-201ENST00000370654 ACCSLQ4AC99 568 aa13.53□□□□□ -0.24
RPF1-201ENST00000370654 RAB6CQ53S08 254 aa13.53□□□□□ -0.24
RPF1-201ENST00000370654 RABGAP1LQ5R372 815 aa13.53□□□□□ -0.24
RPF1-201ENST00000370654 AGBL4Q5VU57 503 aa13.53□□□□□ -0.24
RPF1-201ENST00000370654 TBC1D3GQ6DHY5 549 aa13.53□□□□□ -0.24
RPF1-201ENST00000370654 TBC1D3CQ6IPX1 549 aa13.53□□□□□ -0.24
RPF1-201ENST00000370654 SLC26A9Q7LBE3 791 aa13.53□□□□□ -0.24
RPF1-201ENST00000370654 FAM71AQ8IYT1 594 aa13.53□□□□□ -0.24
RPF1-201ENST00000370654 TBC1D3Q8IZP1 549 aaPredicted RBP13.53□□□□□ -0.24
RPF1-201ENST00000370654 SAP25Q8TEE9 199 aa13.53□□□□□ -0.24
RPF1-201ENST00000370654 SERAC1Q96JX3 654 aa13.53□□□□□ -0.24
RPF1-201ENST00000370654 NPY6RQ99463 290 aa13.53□□□□□ -0.24
RPF1-201ENST00000370654 RAB6CQ9H0N0 254 aa13.53□□□□□ -0.24
RPF1-201ENST00000370654 CCDC86Q9H6F5 360 aaKnown RBP13.53□□□□□ -0.24
RPF1-201ENST00000370654 SLC12A6Q9UHW9 1150 aa13.53□□□□□ -0.24
RPF1-201ENST00000370654 PPM1HQ9ULR3 514 aa13.53□□□□□ -0.24
RPF1-201ENST00000370654 RAXQ9Y2V3 346 aa13.53□□□□□ -0.24
RPF1-201ENST00000370654 FHOD1Q9Y613 1164 aa13.53□□□□□ -0.24
RPF1-201ENST00000370654 GOLGA4Q13439 2230 aaKnown RBP13.52□□□□□ -0.24
RPF1-201ENST00000370654 TRABD2BA6NFA1 517 aa13.52□□□□□ -0.25
RPF1-201ENST00000370654 SMAD6O43541 496 aaKnown RBP13.52□□□□□ -0.25
RPF1-201ENST00000370654 BNIP3LO60238 219 aa13.52□□□□□ -0.25
RPF1-201ENST00000370654 SLC2A3P11169 496 aa13.52□□□□□ -0.25
RPF1-201ENST00000370654 GLDCP23378 1020 aa13.52□□□□□ -0.25
RPF1-201ENST00000370654 NOS2P35228 1153 aa13.52□□□□□ -0.25
RPF1-201ENST00000370654 CXCR3P49682 368 aa13.52□□□□□ -0.25
RPF1-201ENST00000370654 NXPH1P58417 271 aa13.52□□□□□ -0.25
RPF1-201ENST00000370654 TAS2R38P59533 333 aa13.52□□□□□ -0.25
RPF1-201ENST00000370654 DRAP1Q14919 205 aaPredicted RBP13.52□□□□□ -0.25
RPF1-201ENST00000370654 TAF3Q5VWG9 929 aa13.52□□□□□ -0.25
RPF1-201ENST00000370654 KANSL1Q7Z3B3 1105 aa13.52□□□□□ -0.25
RPF1-201ENST00000370654 SH2D3CQ8N5H7 860 aa13.52□□□□□ -0.25
RPF1-201ENST00000370654 ZNF397Q8NF99 534 aaPredicted RBP13.52□□□□□ -0.25
RPF1-201ENST00000370654 SPAG5Q96R06 1193 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms