RNA–Protein interactions for RNA: ENST00000370263.8

CHRNA4-201, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA4, Length 5,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-201ENST00000370263 CBX3Q13185 183 aa18.34■□□□□ 0.53
CHRNA4-201ENST00000370263 IL17AQ16552 155 aa18.34■□□□□ 0.53
CHRNA4-201ENST00000370263 DNAJC14Q6Y2X3 702 aaPredicted RBP18.34■□□□□ 0.53
CHRNA4-201ENST00000370263 ILDR2Q71H61 639 aa18.34■□□□□ 0.53
CHRNA4-201ENST00000370263 AKAP14Q86UN6 197 aa18.34■□□□□ 0.53
CHRNA4-201ENST00000370263 IRF2BP1Q8IU81 584 aa18.34■□□□□ 0.53
CHRNA4-201ENST00000370263 FAM47BQ8NA70 645 aa18.34■□□□□ 0.53
CHRNA4-201ENST00000370263 RBM15BQ8NDT2 890 aaKnown RBP18.34■□□□□ 0.53
CHRNA4-201ENST00000370263 TSEN34Q9BSV6 310 aaKnown RBP18.34■□□□□ 0.53
CHRNA4-201ENST00000370263 H3BNX3 289 aa18.34■□□□□ 0.53
CHRNA4-201ENST00000370263 KCNQ2O43526 872 aa18.34■□□□□ 0.53
CHRNA4-201ENST00000370263 GRIA4P48058 902 aa18.34■□□□□ 0.53
CHRNA4-201ENST00000370263 ZBTB46Q86UZ6 589 aa18.34■□□□□ 0.53
CHRNA4-201ENST00000370263 FBXO30Q8TB52 745 aa18.34■□□□□ 0.53
CHRNA4-201ENST00000370263 INVSQ9Y283 1065 aa18.34■□□□□ 0.53
CHRNA4-201ENST00000370263 SQORQ9Y6N5 450 aa18.34■□□□□ 0.53
CHRNA4-201ENST00000370263 ZC3H13Q5T200 1668 aaKnown RBP18.34■□□□□ 0.53
CHRNA4-201ENST00000370263 LMTK2Q8IWU2 1503 aa18.33■□□□□ 0.53
CHRNA4-201ENST00000370263 GNG14A0A1W2PPG7 69 aa18.33■□□□□ 0.53
CHRNA4-201ENST00000370263 DLG4P78352 724 aa18.33■□□□□ 0.53
CHRNA4-201ENST00000370263 PURBQ96QR8 312 aaKnown RBP18.33■□□□□ 0.53
CHRNA4-201ENST00000370263 REEP1Q9H902 201 aa18.33■□□□□ 0.53
CHRNA4-201ENST00000370263 KCNK1O00180 336 aa18.33■□□□□ 0.53
CHRNA4-201ENST00000370263 SPIDRQ14159 915 aa18.33■□□□□ 0.53
CHRNA4-201ENST00000370263 SLC15A2Q16348 729 aa18.33■□□□□ 0.53
CHRNA4-201ENST00000370263 ELMSAN1Q6PJG2 1045 aa18.33■□□□□ 0.53
CHRNA4-201ENST00000370263 TPD52L3Q96J77 140 aa18.33■□□□□ 0.53
CHRNA4-201ENST00000370263 RTFDC1Q9BY42 306 aaPredicted RBP18.33■□□□□ 0.53
CHRNA4-201ENST00000370263 ERVK-5Q9HDB9 667 aa18.33■□□□□ 0.53
CHRNA4-201ENST00000370263 KIAA1210Q9ULL0 1709 aa18.33■□□□□ 0.53
CHRNA4-201ENST00000370263 CEP170BQ9Y4F5 1589 aaPredicted RBP18.33■□□□□ 0.52
CHRNA4-201ENST00000370263 EPHX4Q8IUS5 362 aa18.33■□□□□ 0.52
CHRNA4-201ENST00000370263 SEPT5Q99719 369 aaPredicted RBP18.33■□□□□ 0.52
CHRNA4-201ENST00000370263 UBXN6Q9BZV1 441 aa18.33■□□□□ 0.52
CHRNA4-201ENST00000370263 ASTN1O14525 1302 aa18.33■□□□□ 0.52
CHRNA4-201ENST00000370263 DHRS12A0PJE2 317 aa18.33■□□□□ 0.52
CHRNA4-201ENST00000370263 CCDC182A6NF36 153 aa18.33■□□□□ 0.52
CHRNA4-201ENST00000370263 NELFEP18615 380 aaKnown RBP18.33■□□□□ 0.52
CHRNA4-201ENST00000370263 MYL12AP19105 171 aa18.33■□□□□ 0.52
CHRNA4-201ENST00000370263 GJA8P48165 433 aa18.33■□□□□ 0.52
CHRNA4-201ENST00000370263 TRAP1Q12931 704 aaKnown RBP18.33■□□□□ 0.52
CHRNA4-201ENST00000370263 VPS72Q15906 364 aa18.33■□□□□ 0.52
CHRNA4-201ENST00000370263 EGFLAMQ63HQ2 1017 aa18.33■□□□□ 0.52
CHRNA4-201ENST00000370263 AADATQ8N5Z0 425 aa18.33■□□□□ 0.52
CHRNA4-201ENST00000370263 CYP2W1Q8TAV3 490 aa18.33■□□□□ 0.52
CHRNA4-201ENST00000370263 NUDT5Q9UKK9 219 aa18.33■□□□□ 0.52
CHRNA4-201ENST00000370263 PIGWQ7Z7B1 504 aa18.33■□□□□ 0.52
CHRNA4-201ENST00000370263 TRNAU1APQ9NX07 287 aaKnown RBP18.33■□□□□ 0.52
CHRNA4-201ENST00000370263 TAS2R13Q9NYV9 303 aa18.33■□□□□ 0.52
CHRNA4-201ENST00000370263 LSM1O15116 133 aaKnown RBP18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 HOXB8P17481 243 aaPredicted RBP18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 CASP7P55210 303 aa18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 FMO1Q01740 532 aa18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 MAP4K3Q8IVH8 894 aa18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 ADGRF2Q8IZF7 708 aa18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 CERS2Q96G23 380 aa18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 ACP6Q9NPH0 428 aa18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 PIM2Q9P1W9 311 aa18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 CLCA2Q9UQC9 943 aa18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 MATN2O00339 956 aa18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 CCNT2O60583 730 aaKnown RBP18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 RTN3O95197 1032 aaPredicted RBP18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 TSPAN19P0C672 248 aa18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 DBTP11182 482 aaKnown RBP18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 ITGALP20701 1170 aa18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 DENND5AQ6IQ26 1287 aa18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 ARL10Q8N8L6 244 aa18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 CAMKK2Q96RR4 588 aa18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 VAT1Q99536 393 aa18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 TBCDQ9BTW9 1192 aa18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 MECRQ9BV79 373 aa18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 MRPL39Q9NYK5 338 aaKnown RBP18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 PTTG2Q9NZH5 202 aa18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 ZNF180Q9UJW8 692 aa18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 TCRBV9S1A1TA0A576 114 aa18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 SEC22BO75396 215 aa18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 PIAS1O75925 651 aa18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 ATP5F1P24539 256 aaPredicted RBP18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 GPC1P35052 558 aa18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 NDST1P52848 882 aa18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 SOX10P56693 466 aa18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 USP46P62068 366 aa18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 IKBIPQ70UQ0 350 aa18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 KRT78Q8N1N4 520 aa18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 GAKO14976 1311 aa18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 CLUHO75153 1309 aa18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 SIGLEC16A6NMB1 481 aa18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 DDX3YO15523 660 aaKnown RBP18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 TGDSO95455 350 aa18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 ATP13A4Q4VNC1 1196 aa18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 CELF6Q96J87 481 aaKnown RBP18.32■□□□□ 0.52
CHRNA4-201ENST00000370263 A0A0A0MRY4 1105 aa18.31■□□□□ 0.52
CHRNA4-201ENST00000370263 DPYSL4O14531 572 aa18.31■□□□□ 0.52
CHRNA4-201ENST00000370263 TPD52L2O43399 206 aaKnown RBP18.31■□□□□ 0.52
CHRNA4-201ENST00000370263 CCR1P32246 355 aa18.31■□□□□ 0.52
CHRNA4-201ENST00000370263 KHDC1Q4VXA5 237 aaKnown RBP18.31■□□□□ 0.52
CHRNA4-201ENST00000370263 RTL3Q8N8U3 475 aaKnown RBP18.31■□□□□ 0.52
CHRNA4-201ENST00000370263 SPATA13Q96N96 652 aa18.31■□□□□ 0.52
CHRNA4-201ENST00000370263 TBL1YQ9BQ87 522 aa18.31■□□□□ 0.52
CHRNA4-201ENST00000370263 ZNF624Q9P2J8 865 aaPredicted RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms