RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 NDST2P52849 883 aa14.11□□□□□ -0.15
SSR4-202ENST00000370085 PTPN5P54829 565 aa14.11□□□□□ -0.15
SSR4-202ENST00000370085 SATB1Q01826 763 aa14.11□□□□□ -0.15
SSR4-202ENST00000370085 SLC20A2Q08357 652 aa14.11□□□□□ -0.15
SSR4-202ENST00000370085 CRY1Q16526 586 aa14.11□□□□□ -0.15
SSR4-202ENST00000370085 CA9Q16790 459 aa14.11□□□□□ -0.15
SSR4-202ENST00000370085 TMEM215Q68D42 235 aa14.11□□□□□ -0.15
SSR4-202ENST00000370085 ZC3H14Q6PJT7 736 aaKnown RBP14.11□□□□□ -0.15
SSR4-202ENST00000370085 CYP4V2Q6ZWL3 525 aaPredicted RBP14.11□□□□□ -0.15
SSR4-202ENST00000370085 METTL3Q86U44 580 aaKnown RBP14.11□□□□□ -0.15
SSR4-202ENST00000370085 APCDD1Q8J025 514 aa14.11□□□□□ -0.15
SSR4-202ENST00000370085 RNF10Q8N5U6 811 aaKnown RBP14.11□□□□□ -0.15
SSR4-202ENST00000370085 TPCN2Q8NHX9 752 aa14.11□□□□□ -0.15
SSR4-202ENST00000370085 KIAA1524Q8TCG1 905 aa14.11□□□□□ -0.15
SSR4-202ENST00000370085 CYB5D2Q8WUJ1 264 aa14.11□□□□□ -0.15
SSR4-202ENST00000370085 UBE2Q2Q8WVN8 375 aa14.11□□□□□ -0.15
SSR4-202ENST00000370085 GABRG3Q99928 467 aa14.11□□□□□ -0.15
SSR4-202ENST00000370085 ZNF670Q9BS34 389 aa14.11□□□□□ -0.15
SSR4-202ENST00000370085 FBRSQ9HAH7 460 aa14.11□□□□□ -0.15
SSR4-202ENST00000370085 ATP13A1Q9HD20 1204 aa14.11□□□□□ -0.15
SSR4-202ENST00000370085 CACNA2D2Q9NY47 1150 aa14.11□□□□□ -0.15
SSR4-202ENST00000370085 ERVW-1Q9UQF0 538 aa14.11□□□□□ -0.15
SSR4-202ENST00000370085 REXO2Q9Y3B8 237 aaKnown RBP14.11□□□□□ -0.15
SSR4-202ENST00000370085 ADGRG1Q9Y653 693 aa14.11□□□□□ -0.15
SSR4-202ENST00000370085 ALG6Q9Y672 507 aa14.11□□□□□ -0.15
SSR4-202ENST00000370085 MACROD2A1Z1Q3 448 aa14.1□□□□□ -0.15
SSR4-202ENST00000370085 ARHGAP42A6NI28 874 aa14.1□□□□□ -0.15
SSR4-202ENST00000370085 SGK1O00141 431 aa14.1□□□□□ -0.15
SSR4-202ENST00000370085 CBX4O00257 560 aa14.1□□□□□ -0.15
SSR4-202ENST00000370085 EPHX1P07099 455 aa14.1□□□□□ -0.15
SSR4-202ENST00000370085 TCF4P15884 667 aa14.1□□□□□ -0.15
SSR4-202ENST00000370085 ERCC2P18074 760 aa14.1□□□□□ -0.15
SSR4-202ENST00000370085 COMTP21964 271 aa14.1□□□□□ -0.15
SSR4-202ENST00000370085 HOXA6P31267 233 aa14.1□□□□□ -0.15
SSR4-202ENST00000370085 VASPP50552 380 aaPredicted RBP14.1□□□□□ -0.15
SSR4-202ENST00000370085 CLCN6P51797 869 aa14.1□□□□□ -0.15
SSR4-202ENST00000370085 CCDC173Q0VFZ6 552 aa14.1□□□□□ -0.15
SSR4-202ENST00000370085 TMCO3Q6UWJ1 677 aa14.1□□□□□ -0.15
SSR4-202ENST00000370085 VSIG1Q86XK7 387 aa14.1□□□□□ -0.15
SSR4-202ENST00000370085 UMODL1-AS1Q8N2C9 162 aa14.1□□□□□ -0.15
SSR4-202ENST00000370085 SORCS1Q8WY21 1168 aa14.1□□□□□ -0.15
SSR4-202ENST00000370085 CCDC114Q96M63 670 aa14.1□□□□□ -0.15
SSR4-202ENST00000370085 MAK16Q9BXY0 300 aaKnown RBP14.1□□□□□ -0.15
SSR4-202ENST00000370085 MAGEB5Q9BZ81 275 aa14.1□□□□□ -0.15
SSR4-202ENST00000370085 LACRTQ9GZZ8 138 aa14.1□□□□□ -0.15
SSR4-202ENST00000370085 PRDM16Q9HAZ2 1276 aa14.1□□□□□ -0.15
SSR4-202ENST00000370085 PCDH18Q9HCL0 1135 aa14.1□□□□□ -0.15
SSR4-202ENST00000370085 CWC15Q9P013 229 aaKnown RBP14.1□□□□□ -0.15
SSR4-202ENST00000370085 BCCIPQ9P287 314 aaKnown RBP eCLIP14.1□□□□□ -0.15
SSR4-202ENST00000370085 INTS6Q9UL03 887 aaKnown RBP14.1□□□□□ -0.15
SSR4-202ENST00000370085 NEU3Q9UQ49 428 aa14.1□□□□□ -0.15
SSR4-202ENST00000370085 FARP1Q9Y4F1 1045 aaPredicted RBP14.1□□□□□ -0.15
SSR4-202ENST00000370085 A0A0D9SEW6 157 aa14.09□□□□□ -0.15
SSR4-202ENST00000370085 CCDC163A0A0D9SF12 145 aa14.09□□□□□ -0.15
SSR4-202ENST00000370085 EDDM13A0A1B0GTR0 161 aa14.09□□□□□ -0.15
SSR4-202ENST00000370085 LRRD1A4D1F6 860 aa14.09□□□□□ -0.15
SSR4-202ENST00000370085 RCCD1A6NED2 376 aa14.09□□□□□ -0.15
SSR4-202ENST00000370085 RNASEH1O60930 286 aaKnown RBP14.09□□□□□ -0.15
SSR4-202ENST00000370085 TNNT1P13805 278 aa14.09□□□□□ -0.15
SSR4-202ENST00000370085 CETN2P41208 172 aa14.09□□□□□ -0.15
SSR4-202ENST00000370085 IL12RB1P42701 662 aa14.09□□□□□ -0.15
SSR4-202ENST00000370085 WASP42768 502 aa14.09□□□□□ -0.15
SSR4-202ENST00000370085 TAS2R40P59535 323 aa14.09□□□□□ -0.15
SSR4-202ENST00000370085 CCZ1BP86790 482 aa14.09□□□□□ -0.15
SSR4-202ENST00000370085 CCZ1P86791 482 aaPredicted RBP14.09□□□□□ -0.15
SSR4-202ENST00000370085 SFSWAPQ12872 951 aaKnown RBP14.09□□□□□ -0.15
SSR4-202ENST00000370085 ENPP2Q13822 863 aa14.09□□□□□ -0.15
SSR4-202ENST00000370085 BYSLQ13895 437 aaKnown RBP14.09□□□□□ -0.15
SSR4-202ENST00000370085 ACCSLQ4AC99 568 aa14.09□□□□□ -0.15
SSR4-202ENST00000370085 PKN3Q6P5Z2 889 aa14.09□□□□□ -0.15
SSR4-202ENST00000370085 PGBD3Q8N328 593 aa14.09□□□□□ -0.15
SSR4-202ENST00000370085 ATP11CQ8NB49 1132 aa14.09□□□□□ -0.15
SSR4-202ENST00000370085 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.09□□□□□ -0.15
SSR4-202ENST00000370085 ATRIPQ8WXE1 791 aa14.09□□□□□ -0.15
SSR4-202ENST00000370085 PDLIM2Q96JY6 352 aa14.09□□□□□ -0.15
SSR4-202ENST00000370085 CSPG4P5Q96PW8 444 aa14.09□□□□□ -0.15
SSR4-202ENST00000370085 ALS2CR12Q96Q35 445 aa14.09□□□□□ -0.15
SSR4-202ENST00000370085 ZNF212Q9UDV6 495 aa14.09□□□□□ -0.15
SSR4-202ENST00000370085 VPS51Q9UID3 782 aa14.09□□□□□ -0.15
SSR4-202ENST00000370085 TFR2Q9UP52 801 aa14.09□□□□□ -0.15
SSR4-202ENST00000370085 OR51B4Q9Y5P0 310 aa14.09□□□□□ -0.15
SSR4-202ENST00000370085 CACNA1HO95180 2353 aa14.08□□□□□ -0.16
SSR4-202ENST00000370085 TCRBV21S2A2A0A5A6 115 aa14.08□□□□□ -0.16
SSR4-202ENST00000370085 TARSL2A2RTX5 802 aaKnown RBP14.08□□□□□ -0.16
SSR4-202ENST00000370085 CCDC66A2RUB6 948 aa14.08□□□□□ -0.16
SSR4-202ENST00000370085 ZNF487B1APH4 448 aa14.08□□□□□ -0.16
SSR4-202ENST00000370085 RASA4BC9J798 803 aa14.08□□□□□ -0.16
SSR4-202ENST00000370085 RASA4O43374 803 aa14.08□□□□□ -0.16
SSR4-202ENST00000370085 ADAM23O75077 832 aa14.08□□□□□ -0.16
SSR4-202ENST00000370085 KRT1P04264 644 aa14.08□□□□□ -0.16
SSR4-202ENST00000370085 ZFXP17010 805 aaPredicted RBP14.08□□□□□ -0.16
SSR4-202ENST00000370085 KDELR1P24390 212 aa14.08□□□□□ -0.16
SSR4-202ENST00000370085 RECQLP46063 649 aaPredicted RBP14.08□□□□□ -0.16
SSR4-202ENST00000370085 DPYSQ14117 519 aa14.08□□□□□ -0.16
SSR4-202ENST00000370085 DPYSL3Q14195 570 aa14.08□□□□□ -0.16
SSR4-202ENST00000370085 PTPRNQ16849 979 aa14.08□□□□□ -0.16
SSR4-202ENST00000370085 HNRNPA1L2Q32P51 320 aaKnown RBP14.08□□□□□ -0.16
SSR4-202ENST00000370085 TXNRD3NBQ6F5E7 133 aa14.08□□□□□ -0.16
SSR4-202ENST00000370085 PEX26Q7Z412 305 aa14.08□□□□□ -0.16
SSR4-202ENST00000370085 DSG4Q86SJ6 1040 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms