RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 CBLBQ13191 982 aa17.76■□□□□ 0.43
UBE3D-203ENST00000369747 RASA2Q15283 850 aa17.76■□□□□ 0.43
UBE3D-203ENST00000369747 TMEM184AQ6ZMB5 413 aa17.76■□□□□ 0.43
UBE3D-203ENST00000369747 PDZD4Q76G19 769 aaPredicted RBP17.76■□□□□ 0.43
UBE3D-203ENST00000369747 TRABD2AQ86V40 505 aa17.76■□□□□ 0.43
UBE3D-203ENST00000369747 IGDCC3Q8IVU1 814 aa17.76■□□□□ 0.43
UBE3D-203ENST00000369747 ZNF276Q8N554 614 aa17.76■□□□□ 0.43
UBE3D-203ENST00000369747 MAB21L3Q8N8X9 362 aa17.76■□□□□ 0.43
UBE3D-203ENST00000369747 SHKBP1Q8TBC3 707 aa17.76■□□□□ 0.43
UBE3D-203ENST00000369747 CCDC110Q8TBZ0 833 aa17.76■□□□□ 0.43
UBE3D-203ENST00000369747 SMG7Q92540 1137 aaKnown RBP17.76■□□□□ 0.43
UBE3D-203ENST00000369747 SERPINB11Q96P15 392 aa17.76■□□□□ 0.43
UBE3D-203ENST00000369747 PPCSQ9HAB8 311 aa17.76■□□□□ 0.43
UBE3D-203ENST00000369747 PIDD1Q9HB75 910 aa17.76■□□□□ 0.43
UBE3D-203ENST00000369747 KCNK9Q9NPC2 374 aa17.76■□□□□ 0.43
UBE3D-203ENST00000369747 ARHGEF4Q9NR80 690 aa17.76■□□□□ 0.43
UBE3D-203ENST00000369747 SLC24A2Q9UI40 661 aa17.76■□□□□ 0.43
UBE3D-203ENST00000369747 DNMT3LQ9UJW3 386 aa17.76■□□□□ 0.43
UBE3D-203ENST00000369747 FAM169AQ9Y6X4 670 aa17.76■□□□□ 0.43
UBE3D-203ENST00000369747 RASA4BC9J798 803 aa17.75■□□□□ 0.43
UBE3D-203ENST00000369747 RASA4O43374 803 aa17.75■□□□□ 0.43
UBE3D-203ENST00000369747 HMBSP08397 361 aa17.75■□□□□ 0.43
UBE3D-203ENST00000369747 PHBP35232 272 aa17.75■□□□□ 0.43
UBE3D-203ENST00000369747 MAGEA6P43360 314 aa17.75■□□□□ 0.43
UBE3D-203ENST00000369747 IFNAR2P48551 515 aa17.75■□□□□ 0.43
UBE3D-203ENST00000369747 TUBP50607 506 aa17.75■□□□□ 0.43
UBE3D-203ENST00000369747 DLX2Q07687 328 aaPredicted RBP17.75■□□□□ 0.43
UBE3D-203ENST00000369747 ADAM15Q13444 863 aa17.75■□□□□ 0.43
UBE3D-203ENST00000369747 LRRC14Q15048 493 aa17.75■□□□□ 0.43
UBE3D-203ENST00000369747 RARS2Q5T160 578 aaKnown RBP17.75■□□□□ 0.43
UBE3D-203ENST00000369747 C3orf62Q6ZUJ4 267 aa17.75■□□□□ 0.43
UBE3D-203ENST00000369747 CCDC33Q8N5R6 958 aa17.75■□□□□ 0.43
UBE3D-203ENST00000369747 ARL14EPQ8N8R7 260 aaPredicted RBP17.75■□□□□ 0.43
UBE3D-203ENST00000369747 MGARPQ8TDB4 240 aa17.75■□□□□ 0.43
UBE3D-203ENST00000369747 MRPS31Q92665 395 aaKnown RBP17.75■□□□□ 0.43
UBE3D-203ENST00000369747 RNF34Q969K3 372 aa17.75■□□□□ 0.43
UBE3D-203ENST00000369747 OLFM3Q96PB7 478 aa17.75■□□□□ 0.43
UBE3D-203ENST00000369747 WDCPQ9H6R7 721 aa17.75■□□□□ 0.43
UBE3D-203ENST00000369747 TLR6Q9Y2C9 796 aa17.75■□□□□ 0.43
UBE3D-203ENST00000369747 SLC12A8A0AV02 714 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 ANKRD65E5RJM6 399 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 GCATO75600 419 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 TSHRP16473 764 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 CDC25CP30307 473 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 ELK3P41970 407 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 NR1H3Q13133 447 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 EFTUD2Q15029 972 aaKnown RBP eCLIP17.74■□□□□ 0.43
UBE3D-203ENST00000369747 FAXCQ5TGI0 409 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 KLHDC10Q6PID8 442 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 SYCE2Q6PIF2 218 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 PPP1R21Q6ZMI0 780 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 CPLX4Q7Z7G2 160 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 SPATS2Q86XZ4 545 aaKnown RBP17.74■□□□□ 0.43
UBE3D-203ENST00000369747 PALM2Q8IXS6 379 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 AGGF1Q8N302 714 aaeCLIP17.74■□□□□ 0.43
UBE3D-203ENST00000369747 MICALL1Q8N3F8 863 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 FBF1Q8TES7 1133 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 CDK5RAP1Q96SZ6 601 aaKnown RBP17.74■□□□□ 0.43
UBE3D-203ENST00000369747 TKTL2Q9H0I9 626 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 ACSS3Q9H6R3 686 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 ETNK1Q9HBU6 452 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 GKN1Q9NS71 199 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 DZANK1Q9NVP4 752 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 CLEC1BQ9P126 229 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 FETUBQ9UGM5 382 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 GGA2Q9UJY4 613 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 CHMP2BQ9UQN3 213 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 TEX264Q9Y6I9 313 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 AVILO75366 819 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 PAPLNO95428 1278 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 POU2F2P09086 479 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 HDCP19113 662 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 POU3F3P20264 500 aaPredicted RBP17.74■□□□□ 0.43
UBE3D-203ENST00000369747 ADRA1BP35368 520 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 ZXDBP98169 803 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 TEAD2Q15562 447 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 PRSS36Q5K4E3 855 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 ANKRD54Q6NXT1 300 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 POTEHQ6S545 545 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 Q7L0L9 218 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 LRRC34Q8IZ02 419 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 ANKRD42Q8N9B4 389 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 SLC39A13Q96H72 371 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 SEC16BQ96JE7 1060 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 FCRL2Q96LA5 508 aaPredicted RBP17.74■□□□□ 0.43
UBE3D-203ENST00000369747 SLC46A2Q9BY10 475 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 KLC2Q9H0B6 622 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 PRDM16Q9HAZ2 1276 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 SMPD4Q9NXE4 827 aa17.74■□□□□ 0.43
UBE3D-203ENST00000369747 PSMC3IPQ9P2W1 217 aaPredicted RBP17.74■□□□□ 0.43
UBE3D-203ENST00000369747 ATXN2Q99700 1313 aaKnown RBP17.73■□□□□ 0.43
UBE3D-203ENST00000369747 H3BRJ5 948 aa17.73■□□□□ 0.43
UBE3D-203ENST00000369747 MFSD11O43934 449 aa17.73■□□□□ 0.43
UBE3D-203ENST00000369747 TBX10O75333 385 aa17.73■□□□□ 0.43
UBE3D-203ENST00000369747 CCR1P32246 355 aa17.73■□□□□ 0.43
UBE3D-203ENST00000369747 KCNQ1P51787 676 aa17.73■□□□□ 0.43
UBE3D-203ENST00000369747 TBX4P57082 545 aa17.73■□□□□ 0.43
UBE3D-203ENST00000369747 GEMIN4P57678 1058 aaKnown RBP17.73■□□□□ 0.43
UBE3D-203ENST00000369747 C4orf22Q6V702 233 aa17.73■□□□□ 0.43
UBE3D-203ENST00000369747 EP400NLQ6ZTU2 488 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms