RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 CCDC6Q16204 474 aa9.06□□□□□ -0.96
SNX27-201ENST00000368838 DDR2Q16832 855 aa9.06□□□□□ -0.96
SNX27-201ENST00000368838 ARL13BQ3SXY8 428 aa9.06□□□□□ -0.96
SNX27-201ENST00000368838 TXNDC8Q6A555 127 aa9.06□□□□□ -0.96
SNX27-201ENST00000368838 TXNRD3NBQ6F5E7 133 aa9.06□□□□□ -0.96
SNX27-201ENST00000368838 FBXO38Q6PIJ6 1188 aa9.06□□□□□ -0.96
SNX27-201ENST00000368838 BRICD5Q6PL45 260 aa9.06□□□□□ -0.96
SNX27-201ENST00000368838 TMCO3Q6UWJ1 677 aa9.06□□□□□ -0.96
SNX27-201ENST00000368838 C4orf22Q6V702 233 aa9.06□□□□□ -0.96
SNX27-201ENST00000368838 DENND5BQ6ZUT9 1274 aa9.06□□□□□ -0.96
SNX27-201ENST00000368838 GPRIN1Q7Z2K8 1008 aa9.06□□□□□ -0.96
SNX27-201ENST00000368838 LAPTM4BQ86VI4 370 aa9.06□□□□□ -0.96
SNX27-201ENST00000368838 BBOF1Q8ND07 529 aa9.06□□□□□ -0.96
SNX27-201ENST00000368838 AENQ8WTP8 325 aaKnown RBP9.06□□□□□ -0.96
SNX27-201ENST00000368838 MAGOHBQ96A72 148 aaKnown RBP9.06□□□□□ -0.96
SNX27-201ENST00000368838 E2F7Q96AV8 911 aa9.06□□□□□ -0.96
SNX27-201ENST00000368838 RTP4Q96DX8 246 aa9.06□□□□□ -0.96
SNX27-201ENST00000368838 C1orf74Q96LT6 269 aa9.06□□□□□ -0.96
SNX27-201ENST00000368838 CFAP57Q96MR6 1250 aa9.06□□□□□ -0.96
SNX27-201ENST00000368838 HAPLN3Q96S86 360 aa9.06□□□□□ -0.96
SNX27-201ENST00000368838 PEBP4Q96S96 227 aa9.06□□□□□ -0.96
SNX27-201ENST00000368838 PNKPQ96T60 521 aa9.06□□□□□ -0.96
SNX27-201ENST00000368838 USB1Q9BQ65 265 aaKnown RBP9.06□□□□□ -0.96
SNX27-201ENST00000368838 BRD8Q9H0E9 1235 aa9.06□□□□□ -0.96
SNX27-201ENST00000368838 DDX47Q9H0S4 455 aaKnown RBP9.06□□□□□ -0.96
SNX27-201ENST00000368838 EBF3Q9H4W6 596 aa9.06□□□□□ -0.96
SNX27-201ENST00000368838 PCDH18Q9HCL0 1135 aa9.06□□□□□ -0.96
SNX27-201ENST00000368838 GKN1Q9NS71 199 aa9.06□□□□□ -0.96
SNX27-201ENST00000368838 DONSONQ9NYP3 566 aa9.06□□□□□ -0.96
SNX27-201ENST00000368838 AMACRQ9UHK6 382 aa9.06□□□□□ -0.96
SNX27-201ENST00000368838 RAB23Q9ULC3 237 aa9.06□□□□□ -0.96
SNX27-201ENST00000368838 FZD10Q9ULW2 581 aa9.06□□□□□ -0.96
SNX27-201ENST00000368838 UTP11Q9Y3A2 253 aaKnown RBP9.06□□□□□ -0.96
SNX27-201ENST00000368838 ASB3Q9Y575 518 aa9.06□□□□□ -0.96
SNX27-201ENST00000368838 CHD8Q9HCK8 2581 aa9.06□□□□□ -0.96
SNX27-201ENST00000368838 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.05□□□□□ -0.96
SNX27-201ENST00000368838 K7ESF4 209 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 MAP2K7O14733 419 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 IRAK2O43187 625 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 LIASO43766 372 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 HEXIM1O94992 359 aaKnown RBP9.05□□□□□ -0.96
SNX27-201ENST00000368838 ECEL1O95672 775 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 ARSAP15289 507 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 TCF4P15884 667 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 HMGA1P17096 107 aaKnown RBP9.05□□□□□ -0.96
SNX27-201ENST00000368838 ITIH2P19823 946 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 CYP2F1P24903 491 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 CDC25CP30307 473 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 GRIK1P39086 918 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 YWHAGP61981 247 aaKnown RBP eCLIP9.05□□□□□ -0.96
SNX27-201ENST00000368838 PTK6Q13882 451 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 LRRC32Q14392 662 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 C15orf59Q2T9L4 293 aaPredicted RBP9.05□□□□□ -0.96
SNX27-201ENST00000368838 ITPRIPL2Q3MIP1 535 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 ATP13A4Q4VNC1 1196 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 DCAF6Q58WW2 860 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 ODF2Q5BJF6 829 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 SYPL2Q5VXT5 272 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 CEP128Q6ZU80 1094 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 CEP68Q76N32 757 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 SCD5Q86SK9 330 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 PHLDB2Q86SQ0 1253 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 RALGPS2Q86X27 583 aaPredicted RBP9.05□□□□□ -0.96
SNX27-201ENST00000368838 JAMLQ86YT9 394 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 RELL1Q8IUW5 271 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 SCN4BQ8IWT1 228 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 CMTM8Q8IZV2 173 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 SPEM1Q8N4L4 309 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 KCTD6Q8NC69 237 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 CLEC4CQ8WTT0 213 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 USP13Q92995 863 aaPredicted RBP9.05□□□□□ -0.96
SNX27-201ENST00000368838 AZIN2Q96A70 460 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 FAM149B1Q96BN6 582 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 THAP11Q96EK4 314 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 CHFRQ96EP1 664 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 SLC39A13Q96H72 371 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 SERPINB11Q96P15 392 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 SLC22A12Q96S37 553 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 HERPUD2Q9BSE4 406 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 SNRNP25Q9BV90 132 aaKnown RBP9.05□□□□□ -0.96
SNX27-201ENST00000368838 AP1M1Q9BXS5 423 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 FAM126AQ9BYI3 521 aaPredicted RBP9.05□□□□□ -0.96
SNX27-201ENST00000368838 C8orf33Q9H7E9 229 aaPredicted RBP9.05□□□□□ -0.96
SNX27-201ENST00000368838 FBRSL1Q9HCM7 1045 aaKnown RBP9.05□□□□□ -0.96
SNX27-201ENST00000368838 TRPC7Q9HCX4 862 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 HPS4Q9NQG7 708 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 ARHGEF38Q9NXL2 777 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 WHRNQ9P202 907 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 CDV3Q9UKY7 258 aaKnown RBP9.05□□□□□ -0.96
SNX27-201ENST00000368838 GON4LQ3T8J9 2241 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 TNRC6BQ9UPQ9 1833 aaKnown RBP9.05□□□□□ -0.96
SNX27-201ENST00000368838 ACACBO00763 2458 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 TCRBV7S2A1N4TA0A589 114 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 HACD1B0YJ81 288 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 M0QYT0 321 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 CAPN9O14815 690 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 SCAMP3O14828 347 aaKnown RBP9.05□□□□□ -0.96
SNX27-201ENST00000368838 GDF9O60383 454 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 EGFP01133 1207 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 IGLV3-27P01718 113 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms