RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 CCDC33Q8N5R6 958 aa12.61□□□□□ -0.39
TUBE1-202ENST00000368662 EIF1ADQ8N9N8 165 aaKnown RBP12.61□□□□□ -0.39
TUBE1-202ENST00000368662 BBOF1Q8ND07 529 aa12.61□□□□□ -0.39
TUBE1-202ENST00000368662 SUSD6Q92537 303 aa12.61□□□□□ -0.39
TUBE1-202ENST00000368662 IRF7Q92985 503 aa12.61□□□□□ -0.39
TUBE1-202ENST00000368662 LRRC45Q96CN5 670 aa12.61□□□□□ -0.39
TUBE1-202ENST00000368662 CDX2Q99626 313 aaPredicted RBP12.61□□□□□ -0.39
TUBE1-202ENST00000368662 POMKQ9H5K3 350 aa12.61□□□□□ -0.39
TUBE1-202ENST00000368662 SPHK2Q9NRA0 654 aa12.61□□□□□ -0.39
TUBE1-202ENST00000368662 DUS2Q9NX74 493 aaKnown RBP12.61□□□□□ -0.39
TUBE1-202ENST00000368662 MARK1Q9P0L2 795 aa12.61□□□□□ -0.39
TUBE1-202ENST00000368662 PAK5Q9P286 719 aa12.61□□□□□ -0.39
TUBE1-202ENST00000368662 IPO11Q9UI26 975 aaKnown RBP12.61□□□□□ -0.39
TUBE1-202ENST00000368662 XIRP2A4UGR9 3374 aa12.6□□□□□ -0.39
TUBE1-202ENST00000368662 HEPACAM2A8MVW5 462 aa12.6□□□□□ -0.39
TUBE1-202ENST00000368662 BHMG1C9JSJ3 638 aaPredicted RBP12.6□□□□□ -0.39
TUBE1-202ENST00000368662 MATN3O15232 486 aa12.6□□□□□ -0.39
TUBE1-202ENST00000368662 MAFKO60675 156 aa12.6□□□□□ -0.39
TUBE1-202ENST00000368662 HOXD9P28356 352 aaPredicted RBP12.6□□□□□ -0.39
TUBE1-202ENST00000368662 CALCOCO2Q13137 446 aa12.6□□□□□ -0.39
TUBE1-202ENST00000368662 SERINC3Q13530 473 aa12.6□□□□□ -0.39
TUBE1-202ENST00000368662 NAA30Q147X3 362 aaPredicted RBP12.6□□□□□ -0.39
TUBE1-202ENST00000368662 FYB2Q5VWT5 728 aa12.6□□□□□ -0.39
TUBE1-202ENST00000368662 MTSS1LQ765P7 747 aa12.6□□□□□ -0.39
TUBE1-202ENST00000368662 ZNF354CQ86Y25 554 aa12.6□□□□□ -0.39
TUBE1-202ENST00000368662 NSMCE1Q8WV22 266 aa12.6□□□□□ -0.39
TUBE1-202ENST00000368662 MYLIPQ8WY64 445 aa12.6□□□□□ -0.39
TUBE1-202ENST00000368662 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.6□□□□□ -0.39
TUBE1-202ENST00000368662 ARHGEF2Q92974 986 aaKnown RBP12.6□□□□□ -0.39
TUBE1-202ENST00000368662 HMCESQ96FZ2 354 aa12.6□□□□□ -0.39
TUBE1-202ENST00000368662 MYADMQ96S97 322 aa12.6□□□□□ -0.39
TUBE1-202ENST00000368662 PARD6BQ9BYG5 372 aa12.6□□□□□ -0.39
TUBE1-202ENST00000368662 C10orf88Q9H8K7 445 aa12.6□□□□□ -0.39
TUBE1-202ENST00000368662 TRHDEQ9UKU6 1024 aa12.6□□□□□ -0.39
TUBE1-202ENST00000368662 RAB21Q9UL25 225 aa12.6□□□□□ -0.39
TUBE1-202ENST00000368662 HPCAL4Q9UM19 191 aa12.6□□□□□ -0.39
TUBE1-202ENST00000368662 USP15Q9Y4E8 981 aaPredicted RBP12.6□□□□□ -0.39
TUBE1-202ENST00000368662 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.59□□□□□ -0.39
TUBE1-202ENST00000368662 OPHN1O60890 802 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 NFATC1O95644 943 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 ADH1CP00326 375 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 PENKP01210 267 aaPredicted RBP12.59□□□□□ -0.39
TUBE1-202ENST00000368662 FOSL2P15408 326 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 VAV1P15498 845 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 ITIH2P19823 946 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 FCARP24071 287 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 IL10RBQ08334 325 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 SLC12A1Q13621 1099 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 PDGFRLQ15198 375 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 TRIP13Q15645 432 aaPredicted RBP12.59□□□□□ -0.39
TUBE1-202ENST00000368662 CXorf57Q6NSI4 855 aaKnown RBP12.59□□□□□ -0.39
TUBE1-202ENST00000368662 PCGF5Q86SE9 256 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 MFSD6LQ8IWD5 586 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 NETO2Q8NC67 525 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 FIBINQ8TAL6 211 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 DEPDC1BQ8WUY9 529 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 ATP2A3Q93084 1043 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 ELSPBP1Q96BH3 223 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 SNF8Q96H20 258 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 PNKPQ96T60 521 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 BBS2Q9BXC9 721 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 TRIM31Q9BZY9 425 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 EPC1Q9H2F5 836 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 LINC00597Q9H2U6 94 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 UBE2ZQ9H832 354 aaPredicted RBP12.59□□□□□ -0.39
TUBE1-202ENST00000368662 SP110Q9HB58 689 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 WHRNQ9P202 907 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 WNT6Q9Y6F9 365 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 NUP205Q92621 2012 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.59□□□□□ -0.39
TUBE1-202ENST00000368662 A0A0A0MRY4 1105 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 KCNA4P22459 653 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 IFI35P80217 286 aaPredicted RBP12.59□□□□□ -0.39
TUBE1-202ENST00000368662 CAV1Q03135 178 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 FCHO2Q0JRZ9 810 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 GPS1Q13098 491 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 SMAD4Q13485 552 aaKnown RBP12.59□□□□□ -0.39
TUBE1-202ENST00000368662 EML3Q32P44 896 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 IL31Q6EBC2 164 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 B4GALNT4Q76KP1 1039 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 TMEM25Q86YD3 366 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 RSPRY1Q96DX4 576 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 SPATA13Q96N96 652 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 ZNF599Q96NL3 588 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 LRRC3BQ96PB8 259 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 MUC3BQ9H195 1237 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 DPH5Q9H2P9 285 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 HAUS2Q9NVX0 235 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 SEPT10Q9P0V9 454 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 KIAA1522Q9P206 1035 aaPredicted RBP12.59□□□□□ -0.39
TUBE1-202ENST00000368662 EPS15L1Q9UBC2 864 aa12.59□□□□□ -0.39
TUBE1-202ENST00000368662 DENND4AQ7Z401 1863 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 A0A0D9SEW6 157 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 ZSCAN5CA6NGD5 496 aaPredicted RBP12.58□□□□□ -0.4
TUBE1-202ENST00000368662 NEDD8-MDP1E9PL57 170 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 KCNK1O00180 336 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 SMAPO00193 183 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 RNF103O00237 685 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 ECI2O75521 394 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 RENBPP51606 427 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms