RNA–Protein interactions for RNA: ENST00000368361.8

CLK2-203, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLK2, Length 2,166 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-203ENST00000368361 BFARQ9NZS9 450 aa25.44■■□□□ 1.66
CLK2-203ENST00000368361 MAGED2Q9UNF1 606 aaPredicted RBP25.44■■□□□ 1.66
CLK2-203ENST00000368361 SLC12A4Q9UP95 1085 aa25.44■■□□□ 1.66
CLK2-203ENST00000368361 NYNRINQ9P2P1 1898 aaKnown RBP25.44■■□□□ 1.66
CLK2-203ENST00000368361 TBX18O95935 607 aa25.44■■□□□ 1.66
CLK2-203ENST00000368361 ERVK-10P10266 1014 aa25.44■■□□□ 1.66
CLK2-203ENST00000368361 TBX4P57082 545 aa25.44■■□□□ 1.66
CLK2-203ENST00000368361 CERCAMQ5T4B2 595 aa25.44■■□□□ 1.66
CLK2-203ENST00000368361 RNF43Q68DV7 783 aa25.44■■□□□ 1.66
CLK2-203ENST00000368361 PACS1Q6VY07 963 aa25.44■■□□□ 1.66
CLK2-203ENST00000368361 TAS1R1Q7RTX1 841 aa25.44■■□□□ 1.66
CLK2-203ENST00000368361 CHSY1Q86X52 802 aa25.44■■□□□ 1.66
CLK2-203ENST00000368361 PLLPQ9Y342 182 aa25.44■■□□□ 1.66
CLK2-203ENST00000368361 H0YHG0 523 aa25.43■■□□□ 1.66
CLK2-203ENST00000368361 UBOX5O94941 541 aa25.43■■□□□ 1.66
CLK2-203ENST00000368361 CNTFP26441 200 aa25.43■■□□□ 1.66
CLK2-203ENST00000368361 CCL23P55773 120 aa25.43■■□□□ 1.66
CLK2-203ENST00000368361 NRG1Q02297 640 aaPredicted RBP25.43■■□□□ 1.66
CLK2-203ENST00000368361 GPR17Q13304 367 aa25.43■■□□□ 1.66
CLK2-203ENST00000368361 SPANXN3Q5MJ09 141 aa25.43■■□□□ 1.66
CLK2-203ENST00000368361 FITM2Q8N6M3 262 aa25.43■■□□□ 1.66
CLK2-203ENST00000368361 RTL3Q8N8U3 475 aaKnown RBP25.43■■□□□ 1.66
CLK2-203ENST00000368361 CERS2Q96G23 380 aa25.43■■□□□ 1.66
CLK2-203ENST00000368361 C1orf74Q96LT6 269 aa25.43■■□□□ 1.66
CLK2-203ENST00000368361 PAK6Q9NQU5 681 aaPredicted RBP25.43■■□□□ 1.66
CLK2-203ENST00000368361 TBC1D4O60343 1298 aa25.42■■□□□ 1.66
CLK2-203ENST00000368361 ATN1P54259 1190 aaPredicted RBP25.42■■□□□ 1.66
CLK2-203ENST00000368361 TAF10Q12962 218 aa25.42■■□□□ 1.66
CLK2-203ENST00000368361 RASSF3Q86WH2 238 aa25.42■■□□□ 1.66
CLK2-203ENST00000368361 NDUFAF2Q8N183 169 aa25.42■■□□□ 1.66
CLK2-203ENST00000368361 SPATA22Q8NHS9 363 aa25.42■■□□□ 1.66
CLK2-203ENST00000368361 BCL7CQ8WUZ0 217 aaPredicted RBP25.42■■□□□ 1.66
CLK2-203ENST00000368361 ZNF669Q96BR6 464 aaPredicted RBP25.42■■□□□ 1.66
CLK2-203ENST00000368361 MKS1Q9NXB0 559 aa25.42■■□□□ 1.66
CLK2-203ENST00000368361 ZFATQ9P243 1243 aa25.42■■□□□ 1.66
CLK2-203ENST00000368361 FNDC1Q4ZHG4 1894 aaPredicted RBP25.42■■□□□ 1.66
CLK2-203ENST00000368361 HGSO14964 777 aaPredicted RBP25.42■■□□□ 1.66
CLK2-203ENST00000368361 HOXA2O43364 376 aa25.42■■□□□ 1.66
CLK2-203ENST00000368361 ATP9BO43861 1147 aa25.42■■□□□ 1.66
CLK2-203ENST00000368361 CACNG3O60359 315 aa25.42■■□□□ 1.66
CLK2-203ENST00000368361 SERPINB4P48594 390 aa25.42■■□□□ 1.66
CLK2-203ENST00000368361 PRPSAP1Q14558 356 aa25.42■■□□□ 1.66
CLK2-203ENST00000368361 TIFABQ6ZNK6 161 aa25.42■■□□□ 1.66
CLK2-203ENST00000368361 TMEM135Q86UB9 458 aa25.42■■□□□ 1.66
CLK2-203ENST00000368361 SPPL2BQ8TCT7 592 aa25.42■■□□□ 1.66
CLK2-203ENST00000368361 MRPL9Q9BYD2 267 aaKnown RBP25.42■■□□□ 1.66
CLK2-203ENST00000368361 SLC2A3P11169 496 aa25.41■■□□□ 1.66
CLK2-203ENST00000368361 PSMD5Q16401 504 aa25.41■■□□□ 1.66
CLK2-203ENST00000368361 RASIP1Q5U651 963 aa25.41■■□□□ 1.66
CLK2-203ENST00000368361 AFMIDQ63HM1 303 aa25.41■■□□□ 1.66
CLK2-203ENST00000368361 IL12RB2Q99665 862 aa25.41■■□□□ 1.66
CLK2-203ENST00000368361 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.41■■□□□ 1.663e-7■□□□□ 8.5
CLK2-203ENST00000368361 GREB1Q4ZG55 1949 aa25.41■■□□□ 1.66
CLK2-203ENST00000368361 MATN3O15232 486 aa25.41■■□□□ 1.66
CLK2-203ENST00000368361 TPH1P17752 444 aa25.41■■□□□ 1.66
CLK2-203ENST00000368361 BGNP21810 368 aa25.41■■□□□ 1.66
CLK2-203ENST00000368361 ELAVL2Q12926 359 aaKnown RBP25.41■■□□□ 1.66
CLK2-203ENST00000368361 NAB1Q13506 487 aa25.41■■□□□ 1.66
CLK2-203ENST00000368361 MS4A13Q5J8X5 152 aa25.41■■□□□ 1.66
CLK2-203ENST00000368361 PRSS55Q6UWB4 352 aaPredicted RBP25.41■■□□□ 1.66
CLK2-203ENST00000368361 MIB1Q86YT6 1006 aa25.41■■□□□ 1.66
CLK2-203ENST00000368361 MFSD3Q96ES6 412 aa25.41■■□□□ 1.66
CLK2-203ENST00000368361 TMEM175Q9BSA9 504 aa25.41■■□□□ 1.66
CLK2-203ENST00000368361 RXFP1Q9HBX9 757 aa25.41■■□□□ 1.66
CLK2-203ENST00000368361 HAUS2Q9NVX0 235 aa25.41■■□□□ 1.66
CLK2-203ENST00000368361 ZCWPW2A0A1B0GU75 182 aa25.4■■□□□ 1.66
CLK2-203ENST00000368361 USP1O94782 785 aa25.4■■□□□ 1.66
CLK2-203ENST00000368361 RTN3O95197 1032 aaPredicted RBP25.4■■□□□ 1.66
CLK2-203ENST00000368361 TOP3BO95985 862 aaKnown RBP25.4■■□□□ 1.66
CLK2-203ENST00000368361 MT-CYBP00156 380 aaPredicted RBP25.4■■□□□ 1.66
CLK2-203ENST00000368361 ALDOAP04075 364 aaKnown RBP25.4■■□□□ 1.66
CLK2-203ENST00000368361 GSTA1P08263 222 aa25.4■■□□□ 1.66
CLK2-203ENST00000368361 DUSP4Q13115 394 aa25.4■■□□□ 1.66
CLK2-203ENST00000368361 NAPEPLDQ6IQ20 393 aa25.4■■□□□ 1.66
CLK2-203ENST00000368361 ZNF683Q8IZ20 524 aa25.4■■□□□ 1.66
CLK2-203ENST00000368361 SERBP1Q8NC51 408 aaKnown RBP eCLIP25.4■■□□□ 1.66
CLK2-203ENST00000368361 TTPALQ9BTX7 342 aa25.4■■□□□ 1.66
CLK2-203ENST00000368361 PPP1R12CQ9BZL4 782 aa25.4■■□□□ 1.66
CLK2-203ENST00000368361 HIPK3Q9H422 1215 aa25.4■■□□□ 1.66
CLK2-203ENST00000368361 TLR8Q9NR97 1041 aaKnown RBP25.4■■□□□ 1.66
CLK2-203ENST00000368361 CLIC5Q9NZA1 410 aa25.4■■□□□ 1.66
CLK2-203ENST00000368361 TANC1Q9C0D5 1861 aa25.4■■□□□ 1.66
CLK2-203ENST00000368361 NEFHP12036 1026 aa25.39■■□□□ 1.66
CLK2-203ENST00000368361 PAPOLAP51003 745 aaKnown RBP25.39■■□□□ 1.66
CLK2-203ENST00000368361 GALNTL6Q49A17 601 aa25.39■■□□□ 1.66
CLK2-203ENST00000368361 FBXW10Q5XX13 1052 aa25.39■■□□□ 1.66
CLK2-203ENST00000368361 TFAP2DQ7Z6R9 452 aa25.39■■□□□ 1.66
CLK2-203ENST00000368361 KLHDC8BQ8IXV7 354 aa25.39■■□□□ 1.66
CLK2-203ENST00000368361 ANKLE1Q8NAG6 615 aa25.39■■□□□ 1.66
CLK2-203ENST00000368361 ARMC2Q8NEN0 867 aa25.39■■□□□ 1.66
CLK2-203ENST00000368361 MECRQ9BV79 373 aa25.39■■□□□ 1.66
CLK2-203ENST00000368361 NOL6Q9H6R4 1146 aaKnown RBP25.39■■□□□ 1.66
CLK2-203ENST00000368361 CHRAC1Q9NRG0 131 aa25.39■■□□□ 1.66
CLK2-203ENST00000368361 ITGA2BP08514 1039 aa25.39■■□□□ 1.65
CLK2-203ENST00000368361 HAPLN1P10915 354 aaPredicted RBP25.39■■□□□ 1.65
CLK2-203ENST00000368361 CRHR1P34998 444 aa25.39■■□□□ 1.65
CLK2-203ENST00000368361 NPY2RP49146 381 aa25.39■■□□□ 1.65
CLK2-203ENST00000368361 CDH17Q12864 832 aa25.39■■□□□ 1.65
CLK2-203ENST00000368361 OVGP1Q12889 678 aa25.39■■□□□ 1.65
CLK2-203ENST00000368361 ANKRD20A4Q4UJ75 823 aa25.39■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms