RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 TMPRSS6Q8IU80 811 aa23.02■■□□□ 1.28
ECHDC1-203ENST00000368291 DCLK2Q8N568 766 aa23.02■■□□□ 1.28
ECHDC1-203ENST00000368291 OR7D4Q8NG98 312 aa23.02■■□□□ 1.28
ECHDC1-203ENST00000368291 OR2T3Q8NH03 318 aa23.02■■□□□ 1.28
ECHDC1-203ENST00000368291 PPP1R9BQ96SB3 815 aa23.02■■□□□ 1.28
ECHDC1-203ENST00000368291 SNRNP25Q9BV90 132 aaKnown RBP23.02■■□□□ 1.28
ECHDC1-203ENST00000368291 MUC3BQ9H195 1237 aa23.02■■□□□ 1.28
ECHDC1-203ENST00000368291 DEF6Q9H4E7 631 aa23.02■■□□□ 1.28
ECHDC1-203ENST00000368291 PRDM16Q9HAZ2 1276 aa23.02■■□□□ 1.28
ECHDC1-203ENST00000368291 SPTLC3Q9NUV7 552 aa23.02■■□□□ 1.28
ECHDC1-203ENST00000368291 SUN2Q9UH99 717 aa23.02■■□□□ 1.28
ECHDC1-203ENST00000368291 PCSK1NQ9UHG2 260 aa23.02■■□□□ 1.28
ECHDC1-203ENST00000368291 PTPRZ1P23471 2315 aaPredicted RBP23.02■■□□□ 1.28
ECHDC1-203ENST00000368291 ILVBLA1L0T0 632 aa23.01■■□□□ 1.27
ECHDC1-203ENST00000368291 AKR1B10O60218 316 aa23.01■■□□□ 1.27
ECHDC1-203ENST00000368291 SNAP91O60641 907 aa23.01■■□□□ 1.27
ECHDC1-203ENST00000368291 RNF8O76064 485 aa23.01■■□□□ 1.27
ECHDC1-203ENST00000368291 TCF4P15884 667 aa23.01■■□□□ 1.27
ECHDC1-203ENST00000368291 ACAP1Q15027 740 aa23.01■■□□□ 1.27
ECHDC1-203ENST00000368291 RWDD4Q6NW29 188 aaKnown RBP23.01■■□□□ 1.27
ECHDC1-203ENST00000368291 METTL3Q86U44 580 aaKnown RBP23.01■■□□□ 1.27
ECHDC1-203ENST00000368291 NIPA2Q8N8Q9 360 aa23.01■■□□□ 1.27
ECHDC1-203ENST00000368291 RUBCNQ92622 972 aa23.01■■□□□ 1.27
ECHDC1-203ENST00000368291 RETREG1Q9H6L5 497 aa23.01■■□□□ 1.27
ECHDC1-203ENST00000368291 ANAPC7Q9UJX3 599 aa23.01■■□□□ 1.27
ECHDC1-203ENST00000368291 RAB23Q9ULC3 237 aa23.01■■□□□ 1.27
ECHDC1-203ENST00000368291 AP4E1Q9UPM8 1137 aa23.01■■□□□ 1.27
ECHDC1-203ENST00000368291 GON4LQ3T8J9 2241 aa23.01■■□□□ 1.27
ECHDC1-203ENST00000368291 ZBTB24O43167 697 aaPredicted RBP23.01■■□□□ 1.27
ECHDC1-203ENST00000368291 SIN3BO75182 1162 aa23.01■■□□□ 1.27
ECHDC1-203ENST00000368291 ERMARDQ5T6L9 678 aa23.01■■□□□ 1.27
ECHDC1-203ENST00000368291 C9orf64Q5T6V5 341 aa23.01■■□□□ 1.27
ECHDC1-203ENST00000368291 KIAA1324Q6UXG2 1013 aaKnown RBP23.01■■□□□ 1.27
ECHDC1-203ENST00000368291 ZNF783Q6ZMS7 281 aa23.01■■□□□ 1.27
ECHDC1-203ENST00000368291 FRS2Q8WU20 508 aa23.01■■□□□ 1.27
ECHDC1-203ENST00000368291 PTPRN2Q92932 1015 aa23.01■■□□□ 1.27
ECHDC1-203ENST00000368291 CCDC42Q96M95 316 aa23.01■■□□□ 1.27
ECHDC1-203ENST00000368291 USP36Q9P275 1121 aaKnown RBP23.01■■□□□ 1.27
ECHDC1-203ENST00000368291 VPS51Q9UID3 782 aa23.01■■□□□ 1.27
ECHDC1-203ENST00000368291 USP18Q9UMW8 372 aa23.01■■□□□ 1.27
ECHDC1-203ENST00000368291 IGHV1OR15-9A0A0B4J2B8 117 aa23■■□□□ 1.27
ECHDC1-203ENST00000368291 CREB3O43889 395 aa23■■□□□ 1.27
ECHDC1-203ENST00000368291 VAV1P15498 845 aa23■■□□□ 1.27
ECHDC1-203ENST00000368291 GLDCP23378 1020 aa23■■□□□ 1.27
ECHDC1-203ENST00000368291 IL1R2P27930 398 aa23■■□□□ 1.27
ECHDC1-203ENST00000368291 PCK1P35558 622 aa23■■□□□ 1.27
ECHDC1-203ENST00000368291 MAPKAPK2P49137 400 aa23■■□□□ 1.27
ECHDC1-203ENST00000368291 GNA12Q03113 381 aa23■■□□□ 1.27
ECHDC1-203ENST00000368291 PIGHQ14442 188 aaPredicted RBP23■■□□□ 1.27
ECHDC1-203ENST00000368291 PMS2CLQ68D20 193 aa23■■□□□ 1.27
ECHDC1-203ENST00000368291 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23■■□□□ 1.27
ECHDC1-203ENST00000368291 DCAF4L2Q8NA75 395 aa23■■□□□ 1.27
ECHDC1-203ENST00000368291 SIPA1Q96FS4 1042 aa23■■□□□ 1.27
ECHDC1-203ENST00000368291 SPACA7Q96KW9 195 aa23■■□□□ 1.27
ECHDC1-203ENST00000368291 ITM2CQ9NQX7 267 aa23■■□□□ 1.27
ECHDC1-203ENST00000368291 DNAI1Q9UI46 699 aa23■■□□□ 1.27
ECHDC1-203ENST00000368291 CYP8B1Q9UNU6 501 aa23■■□□□ 1.27
ECHDC1-203ENST00000368291 WDR87Q6ZQQ6 2873 aa22.99■■□□□ 1.27
ECHDC1-203ENST00000368291 ATP9BO43861 1147 aa22.99■■□□□ 1.27
ECHDC1-203ENST00000368291 PRPSAP2O60256 369 aa22.99■■□□□ 1.27
ECHDC1-203ENST00000368291 ZNF217O75362 1048 aa22.99■■□□□ 1.27
ECHDC1-203ENST00000368291 ZMPSTE24O75844 475 aa22.99■■□□□ 1.27
ECHDC1-203ENST00000368291 MT-CO1P00395 513 aa22.99■■□□□ 1.27
ECHDC1-203ENST00000368291 H2AFZP0C0S5 128 aa22.99■■□□□ 1.27
ECHDC1-203ENST00000368291 EPHB2P29323 1055 aa22.99■■□□□ 1.27
ECHDC1-203ENST00000368291 H2AFVQ71UI9 128 aa22.99■■□□□ 1.27
ECHDC1-203ENST00000368291 CACUL1Q86Y37 369 aa22.99■■□□□ 1.27
ECHDC1-203ENST00000368291 ZNF564Q8TBZ8 553 aaPredicted RBP22.99■■□□□ 1.27
ECHDC1-203ENST00000368291 CTNNBL1Q8WYA6 563 aaPredicted RBP22.99■■□□□ 1.27
ECHDC1-203ENST00000368291 PRCCQ92733 491 aaPredicted RBP22.99■■□□□ 1.27
ECHDC1-203ENST00000368291 EPAS1Q99814 870 aa22.99■■□□□ 1.27
ECHDC1-203ENST00000368291 NCAPGQ9BPX3 1015 aa22.99■■□□□ 1.27
ECHDC1-203ENST00000368291 RSPH9Q9H1X1 276 aaPredicted RBP22.99■■□□□ 1.27
ECHDC1-203ENST00000368291 DHX35Q9H5Z1 703 aaKnown RBP22.99■■□□□ 1.27
ECHDC1-203ENST00000368291 NOL6Q9H6R4 1146 aaKnown RBP22.99■■□□□ 1.27
ECHDC1-203ENST00000368291 FBRSQ9HAH7 460 aa22.99■■□□□ 1.27
ECHDC1-203ENST00000368291 NCDNQ9UBB6 729 aa22.99■■□□□ 1.27
ECHDC1-203ENST00000368291 IP6K2Q9UHH9 426 aa22.99■■□□□ 1.27
ECHDC1-203ENST00000368291 SLC25A13Q9UJS0 675 aa22.99■■□□□ 1.27
ECHDC1-203ENST00000368291 HS3ST2Q9Y278 367 aa22.99■■□□□ 1.27
ECHDC1-203ENST00000368291 EDDM13A0A1B0GTR0 161 aa22.98■■□□□ 1.27
ECHDC1-203ENST00000368291 TARSL2A2RTX5 802 aaKnown RBP22.98■■□□□ 1.27
ECHDC1-203ENST00000368291 WASH4PA8MWX3 477 aa22.98■■□□□ 1.27
ECHDC1-203ENST00000368291 RETP07949 1114 aa22.98■■□□□ 1.27
ECHDC1-203ENST00000368291 TMEM253P0C7T8 217 aa22.98■■□□□ 1.27
ECHDC1-203ENST00000368291 TGM1P22735 817 aa22.98■■□□□ 1.27
ECHDC1-203ENST00000368291 ACVRL1P37023 503 aa22.98■■□□□ 1.27
ECHDC1-203ENST00000368291 NNMTP40261 264 aa22.98■■□□□ 1.27
ECHDC1-203ENST00000368291 RPS14P62263 151 aaKnown RBP22.98■■□□□ 1.27
ECHDC1-203ENST00000368291 KRT83P78385 493 aa22.98■■□□□ 1.27
ECHDC1-203ENST00000368291 BYSLQ13895 437 aaKnown RBP22.98■■□□□ 1.27
ECHDC1-203ENST00000368291 TXNRD3NBQ6F5E7 133 aa22.98■■□□□ 1.27
ECHDC1-203ENST00000368291 C11orf74Q86VG3 221 aa22.98■■□□□ 1.27
ECHDC1-203ENST00000368291 CPNE8Q86YQ8 564 aa22.98■■□□□ 1.27
ECHDC1-203ENST00000368291 SH2D3CQ8N5H7 860 aa22.98■■□□□ 1.27
ECHDC1-203ENST00000368291 RTL3Q8N8U3 475 aaKnown RBP22.98■■□□□ 1.27
ECHDC1-203ENST00000368291 ARHGEF2Q92974 986 aaKnown RBP22.98■■□□□ 1.27
ECHDC1-203ENST00000368291 LOXL4Q96JB6 756 aa22.98■■□□□ 1.27
ECHDC1-203ENST00000368291 KCTD15Q96SI1 283 aaPredicted RBP22.98■■□□□ 1.27
ECHDC1-203ENST00000368291 C2orf49Q9BVC5 232 aaPredicted RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms