RNA–Protein interactions for RNA: ENST00000368205.7

PTPRK-202, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 662 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-202ENST00000368205 ATG9BQ674R7 924 aa4.3□□□□□ -1.72
PTPRK-202ENST00000368205 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.3□□□□□ -1.727e-8■■■□□ 17.1
PTPRK-202ENST00000368205 FAM9BQ8IZU0 186 aa4.3□□□□□ -1.72
PTPRK-202ENST00000368205 SLC25A41Q8N5S1 370 aa4.3□□□□□ -1.72
PTPRK-202ENST00000368205 KDM1BQ8NB78 822 aa4.3□□□□□ -1.72
PTPRK-202ENST00000368205 BICD2Q8TD16 824 aa4.3□□□□□ -1.72
PTPRK-202ENST00000368205 ADAMTS14Q8WXS8 1223 aa4.3□□□□□ -1.72
PTPRK-202ENST00000368205 APOL5Q9BWW9 433 aa4.3□□□□□ -1.72
PTPRK-202ENST00000368205 CATSPERBQ9H7T0 1116 aa4.3□□□□□ -1.72
PTPRK-202ENST00000368205 GOLGA6AQ9NYA3 693 aa4.3□□□□□ -1.72
PTPRK-202ENST00000368205 GAPVD1Q14C86 1478 aa4.3□□□□□ -1.72
PTPRK-202ENST00000368205 MIA2Q96PC5 1412 aa4.29□□□□□ -1.72
PTPRK-202ENST00000368205 KIF7Q2M1P5 1343 aa4.29□□□□□ -1.72
PTPRK-202ENST00000368205 LAMC3Q9Y6N6 1575 aa4.29□□□□□ -1.72
PTPRK-202ENST00000368205 C3orf70A6NLC5 250 aaPredicted RBP4.29□□□□□ -1.72
PTPRK-202ENST00000368205 KCNJ18B7U540 433 aa4.29□□□□□ -1.72
PTPRK-202ENST00000368205 MSI1O43347 362 aaKnown RBP4.29□□□□□ -1.72
PTPRK-202ENST00000368205 TSHRP16473 764 aa4.29□□□□□ -1.72
PTPRK-202ENST00000368205 SLC16A2P36021 539 aa4.29□□□□□ -1.72
PTPRK-202ENST00000368205 POU3F1Q03052 451 aaPredicted RBP4.29□□□□□ -1.72
PTPRK-202ENST00000368205 POU5F1BQ06416 359 aa4.29□□□□□ -1.72
PTPRK-202ENST00000368205 GALNT3Q14435 633 aa4.29□□□□□ -1.72
PTPRK-202ENST00000368205 MAPKAPK3Q16644 382 aa4.29□□□□□ -1.72
PTPRK-202ENST00000368205 DUSP6Q16828 381 aa4.29□□□□□ -1.72
PTPRK-202ENST00000368205 GFOD2Q3B7J2 385 aa4.29□□□□□ -1.72
PTPRK-202ENST00000368205 TDRD12Q587J7 1177 aaKnown RBP4.29□□□□□ -1.72
PTPRK-202ENST00000368205 ERAP2Q6P179 960 aa4.29□□□□□ -1.72
PTPRK-202ENST00000368205 TMEM88Q6PEY1 159 aa4.29□□□□□ -1.72
PTPRK-202ENST00000368205 CREB3L2Q70SY1 520 aa4.29□□□□□ -1.72
PTPRK-202ENST00000368205 CAMK1DQ8IU85 385 aa4.29□□□□□ -1.72
PTPRK-202ENST00000368205 CLIP4Q8N3C7 705 aa4.29□□□□□ -1.72
PTPRK-202ENST00000368205 SLC22A17Q8WUG5 538 aa4.29□□□□□ -1.72
PTPRK-202ENST00000368205 GDF15Q99988 308 aa4.29□□□□□ -1.72
PTPRK-202ENST00000368205 EIF2AQ9BY44 585 aaKnown RBP4.29□□□□□ -1.72
PTPRK-202ENST00000368205 FSCN3Q9NQT6 498 aa4.29□□□□□ -1.72
PTPRK-202ENST00000368205 PRDM11Q9NQV5 511 aa4.29□□□□□ -1.72
PTPRK-202ENST00000368205 CA14Q9ULX7 337 aa4.29□□□□□ -1.72
PTPRK-202ENST00000368205 EID1Q9Y6B2 187 aa4.29□□□□□ -1.72
PTPRK-202ENST00000368205 RPRD2Q5VT52 1461 aaKnown RBP4.29□□□□□ -1.72
PTPRK-202ENST00000368205 SMG6Q86US8 1419 aaKnown RBP4.29□□□□□ -1.72
PTPRK-202ENST00000368205 ROCK1Q13464 1354 aa4.28□□□□□ -1.72
PTPRK-202ENST00000368205 DHX29Q7Z478 1369 aaKnown RBP4.28□□□□□ -1.72
PTPRK-202ENST00000368205 EPRSP07814 1512 aaKnown RBP4.28□□□□□ -1.72
PTPRK-202ENST00000368205 I6L893 689 aaPredicted RBP4.28□□□□□ -1.72
PTPRK-202ENST00000368205 ZBTB11O95625 1053 aaPredicted RBP4.28□□□□□ -1.72
PTPRK-202ENST00000368205 UMODP07911 640 aa4.28□□□□□ -1.72
PTPRK-202ENST00000368205 ALDOCP09972 364 aaKnown RBP4.28□□□□□ -1.72
PTPRK-202ENST00000368205 CHRNB2P17787 502 aa4.28□□□□□ -1.72
PTPRK-202ENST00000368205 PIK3CBP42338 1070 aa4.28□□□□□ -1.72
PTPRK-202ENST00000368205 TLE3Q04726 772 aa4.28□□□□□ -1.72
PTPRK-202ENST00000368205 PLEKHG6Q3KR16 790 aa4.28□□□□□ -1.72
PTPRK-202ENST00000368205 MDGA2Q7Z553 956 aa4.28□□□□□ -1.72
PTPRK-202ENST00000368205 TTC30AQ86WT1 665 aa4.28□□□□□ -1.72
PTPRK-202ENST00000368205 FAM185AQ8N0U4 392 aa4.28□□□□□ -1.72
PTPRK-202ENST00000368205 RTP4Q96DX8 246 aa4.28□□□□□ -1.72
PTPRK-202ENST00000368205 ZNF419Q96HQ0 510 aaPredicted RBP4.28□□□□□ -1.72
PTPRK-202ENST00000368205 C1QTNF4Q9BXJ3 329 aa4.28□□□□□ -1.72
PTPRK-202ENST00000368205 SLC4A4Q9Y6R1 1079 aa4.28□□□□□ -1.72
PTPRK-202ENST00000368205 BCORL1Q5H9F3 1711 aa4.28□□□□□ -1.72
PTPRK-202ENST00000368205 TEX14Q8IWB6 1497 aa4.28□□□□□ -1.72
PTPRK-202ENST00000368205 TARBP1Q13395 1621 aaKnown RBP4.28□□□□□ -1.72
PTPRK-202ENST00000368205 WDR62O43379 1518 aa4.27□□□□□ -1.73
PTPRK-202ENST00000368205 A0A0B4J293 547 aa4.27□□□□□ -1.73
PTPRK-202ENST00000368205 POM121BA6NF01 834 aa4.27□□□□□ -1.73
PTPRK-202ENST00000368205 J3KTA2 159 aa4.27□□□□□ -1.73
PTPRK-202ENST00000368205 VWA5AO00534 786 aa4.27□□□□□ -1.73
PTPRK-202ENST00000368205 TSPAN6O43657 245 aa4.27□□□□□ -1.73
PTPRK-202ENST00000368205 TAF5LO75529 589 aa4.27□□□□□ -1.73
PTPRK-202ENST00000368205 KRT36O76013 467 aa4.27□□□□□ -1.73
PTPRK-202ENST00000368205 ALDOAP04075 364 aaKnown RBP4.27□□□□□ -1.73
PTPRK-202ENST00000368205 SRGAP2BP0DMP2 458 aa4.27□□□□□ -1.73
PTPRK-202ENST00000368205 TCEA1P23193 301 aaKnown RBP4.27□□□□□ -1.73
PTPRK-202ENST00000368205 DEKP35659 375 aaKnown RBP4.27□□□□□ -1.73
PTPRK-202ENST00000368205 CASP5P51878 434 aa4.27□□□□□ -1.73
PTPRK-202ENST00000368205 DLX5P56178 289 aa4.27□□□□□ -1.73
PTPRK-202ENST00000368205 EEF1A2Q05639 463 aaKnown RBP4.27□□□□□ -1.73
PTPRK-202ENST00000368205 ZNF718Q3SXZ3 478 aa4.27□□□□□ -1.73
PTPRK-202ENST00000368205 ZNF672Q499Z4 452 aaPredicted RBP4.27□□□□□ -1.73
PTPRK-202ENST00000368205 FSCBQ5H9T9 825 aa4.27□□□□□ -1.73
PTPRK-202ENST00000368205 WBP2NLQ6ICG8 309 aa4.27□□□□□ -1.73
PTPRK-202ENST00000368205 Q6ZSV7 163 aa4.27□□□□□ -1.73
PTPRK-202ENST00000368205 RASGRP3Q8IV61 690 aa4.27□□□□□ -1.73
PTPRK-202ENST00000368205 MYO1HQ8N1T3 1032 aa4.27□□□□□ -1.73
PTPRK-202ENST00000368205 ADAD1Q96M93 576 aaKnown RBP4.27□□□□□ -1.73
PTPRK-202ENST00000368205 B3GNT4Q9C0J1 378 aa4.27□□□□□ -1.73
PTPRK-202ENST00000368205 DDX31Q9H8H2 851 aaKnown RBP4.27□□□□□ -1.73
PTPRK-202ENST00000368205 OBP2AQ9NY56 170 aa4.27□□□□□ -1.73
PTPRK-202ENST00000368205 RGL1Q9NZL6 768 aa4.27□□□□□ -1.73
PTPRK-202ENST00000368205 NUDCQ9Y266 331 aa4.27□□□□□ -1.73
PTPRK-202ENST00000368205 DNMT1P26358 1616 aaKnown RBP4.27□□□□□ -1.73
PTPRK-202ENST00000368205 ABCC5O15440 1437 aa4.27□□□□□ -1.73
PTPRK-202ENST00000368205 DAPK1P53355 1430 aa4.27□□□□□ -1.73
PTPRK-202ENST00000368205 CDK13Q14004 1512 aaKnown RBP4.26□□□□□ -1.73
PTPRK-202ENST00000368205 PZPP20742 1482 aa4.26□□□□□ -1.73
PTPRK-202ENST00000368205 LOC105369274A0A096LPK9 316 aa4.26□□□□□ -1.73
PTPRK-202ENST00000368205 TRBV5-7A0A0A0MS05 114 aa4.26□□□□□ -1.73
PTPRK-202ENST00000368205 LOC102723532A0A0G2JNH3 316 aa4.26□□□□□ -1.73
PTPRK-202ENST00000368205 MS4A18H0YCH9 400 aa4.26□□□□□ -1.73
PTPRK-202ENST00000368205 KIF3BO15066 747 aa4.26□□□□□ -1.73
PTPRK-202ENST00000368205 NDST3O95803 873 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms