RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 SIK2Q9H0K1 926 aa12.59□□□□□ -0.39
PTPN7-202ENST00000367279 ZCWPW1Q9H0M4 648 aa12.59□□□□□ -0.39
PTPN7-202ENST00000367279 C1orf21Q9H246 121 aa12.59□□□□□ -0.39
PTPN7-202ENST00000367279 NMRAL1Q9HBL8 299 aa12.59□□□□□ -0.39
PTPN7-202ENST00000367279 TCF7L2Q9NQB0 619 aa12.59□□□□□ -0.39
PTPN7-202ENST00000367279 DNAJC28Q9NX36 388 aa12.59□□□□□ -0.39
PTPN7-202ENST00000367279 SSX2IPQ9Y2D8 614 aa12.59□□□□□ -0.39
PTPN7-202ENST00000367279 NRP1O14786 923 aa12.59□□□□□ -0.39
PTPN7-202ENST00000367279 CD4P01730 458 aa12.59□□□□□ -0.39
PTPN7-202ENST00000367279 PRKCGP05129 697 aa12.59□□□□□ -0.39
PTPN7-202ENST00000367279 USP17L7P0C7H9 530 aa12.59□□□□□ -0.39
PTPN7-202ENST00000367279 ETS2P15036 469 aa12.59□□□□□ -0.39
PTPN7-202ENST00000367279 SMPD1P17405 629 aa12.59□□□□□ -0.39
PTPN7-202ENST00000367279 PKNOX1P55347 436 aa12.59□□□□□ -0.39
PTPN7-202ENST00000367279 KLF10Q13118 480 aa12.59□□□□□ -0.39
PTPN7-202ENST00000367279 USP10Q14694 798 aaKnown RBP12.59□□□□□ -0.39
PTPN7-202ENST00000367279 CCDC153Q494R4 210 aa12.59□□□□□ -0.39
PTPN7-202ENST00000367279 ANKRD20A4Q4UJ75 823 aa12.59□□□□□ -0.39
PTPN7-202ENST00000367279 TMCO4Q5TGY1 634 aa12.59□□□□□ -0.39
PTPN7-202ENST00000367279 FOXB2Q5VYV0 432 aa12.59□□□□□ -0.39
PTPN7-202ENST00000367279 TWF2Q6IBS0 349 aaKnown RBP12.59□□□□□ -0.39
PTPN7-202ENST00000367279 PDZD4Q76G19 769 aaPredicted RBP12.59□□□□□ -0.39
PTPN7-202ENST00000367279 PPP2R3CQ969Q6 453 aa12.59□□□□□ -0.39
PTPN7-202ENST00000367279 LENG1Q96BZ8 264 aaPredicted RBP12.59□□□□□ -0.39
PTPN7-202ENST00000367279 CATSPER2Q96P56 530 aa12.59□□□□□ -0.39
PTPN7-202ENST00000367279 GCNAQ96QF7 691 aa12.59□□□□□ -0.39
PTPN7-202ENST00000367279 SIKE1Q9BRV8 207 aa12.59□□□□□ -0.39
PTPN7-202ENST00000367279 KLHL4Q9C0H6 718 aa12.59□□□□□ -0.39
PTPN7-202ENST00000367279 CDH19Q9H159 772 aa12.59□□□□□ -0.39
PTPN7-202ENST00000367279 GPAMQ9HCL2 828 aa12.59□□□□□ -0.39
PTPN7-202ENST00000367279 PDP2Q9P2J9 529 aa12.59□□□□□ -0.39
PTPN7-202ENST00000367279 SHROOM3Q8TF72 1996 aa12.59□□□□□ -0.39
PTPN7-202ENST00000367279 XPO1O14980 1071 aaKnown RBP12.59□□□□□ -0.39
PTPN7-202ENST00000367279 AHCYL1O43865 530 aa12.59□□□□□ -0.39
PTPN7-202ENST00000367279 TRIM13O60858 407 aa12.59□□□□□ -0.39
PTPN7-202ENST00000367279 ZNF460Q14592 562 aa12.59□□□□□ -0.39
PTPN7-202ENST00000367279 DGKDQ16760 1214 aa12.59□□□□□ -0.39
PTPN7-202ENST00000367279 CRYBG2Q8N1P7 616 aa12.59□□□□□ -0.39
PTPN7-202ENST00000367279 RNF169Q8NCN4 708 aa12.59□□□□□ -0.39
PTPN7-202ENST00000367279 ZFP42Q96MM3 310 aa12.59□□□□□ -0.39
PTPN7-202ENST00000367279 KCNK16Q96T55 309 aa12.59□□□□□ -0.39
PTPN7-202ENST00000367279 FAM96AQ9H5X1 160 aa12.59□□□□□ -0.39
PTPN7-202ENST00000367279 ADARB2Q9NS39 739 aaKnown RBP12.59□□□□□ -0.39
PTPN7-202ENST00000367279 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.58□□□□□ -0.4
PTPN7-202ENST00000367279 MMP3P08254 477 aa12.58□□□□□ -0.4
PTPN7-202ENST00000367279 NPR3P17342 541 aa12.58□□□□□ -0.4
PTPN7-202ENST00000367279 PTPN1P18031 435 aaKnown RBP12.58□□□□□ -0.4
PTPN7-202ENST00000367279 GLUD2P49448 558 aa12.58□□□□□ -0.4
PTPN7-202ENST00000367279 NAGLUP54802 743 aa12.58□□□□□ -0.4
PTPN7-202ENST00000367279 SV2CQ496J9 727 aa12.58□□□□□ -0.4
PTPN7-202ENST00000367279 SPNS2Q8IVW8 549 aa12.58□□□□□ -0.4
PTPN7-202ENST00000367279 VPS39Q96JC1 886 aa12.58□□□□□ -0.4
PTPN7-202ENST00000367279 SH3GL3Q99963 347 aa12.58□□□□□ -0.4
PTPN7-202ENST00000367279 GATA5Q9BWX5 397 aaPredicted RBP12.58□□□□□ -0.4
PTPN7-202ENST00000367279 DUSP16Q9BY84 665 aa12.58□□□□□ -0.4
PTPN7-202ENST00000367279 ILKAPQ9H0C8 392 aaPredicted RBP12.58□□□□□ -0.4
PTPN7-202ENST00000367279 RUVBL2Q9Y230 463 aaKnown RBP12.58□□□□□ -0.4
PTPN7-202ENST00000367279 YJEFN3A6XGL0 299 aa12.58□□□□□ -0.4
PTPN7-202ENST00000367279 ZNF487B1APH4 448 aa12.58□□□□□ -0.4
PTPN7-202ENST00000367279 DFFAO00273 331 aa12.58□□□□□ -0.4
PTPN7-202ENST00000367279 DAB1O75553 588 aa12.58□□□□□ -0.4
PTPN7-202ENST00000367279 PIGNO95427 931 aa12.58□□□□□ -0.4
PTPN7-202ENST00000367279 ATP5BP06576 529 aaKnown RBP12.58□□□□□ -0.4
PTPN7-202ENST00000367279 FESP07332 822 aa12.58□□□□□ -0.4
PTPN7-202ENST00000367279 NMBRP28336 390 aa12.58□□□□□ -0.4
PTPN7-202ENST00000367279 ADRA1BP35368 520 aa12.58□□□□□ -0.4
PTPN7-202ENST00000367279 LIMK2P53671 638 aa12.58□□□□□ -0.4
PTPN7-202ENST00000367279 CDK18Q07002 472 aa12.58□□□□□ -0.4
PTPN7-202ENST00000367279 TMEM198Q66K66 360 aa12.58□□□□□ -0.4
PTPN7-202ENST00000367279 ST13P4Q8IZP2 240 aaPredicted RBP12.58□□□□□ -0.4
PTPN7-202ENST00000367279 OMDQ99983 421 aa12.58□□□□□ -0.4
PTPN7-202ENST00000367279 VCX3BQ9H321 246 aa12.58□□□□□ -0.4
PTPN7-202ENST00000367279 VTA1Q9NP79 307 aa12.58□□□□□ -0.4
PTPN7-202ENST00000367279 PCDHB12Q9Y5F1 795 aa12.58□□□□□ -0.4
PTPN7-202ENST00000367279 LTBP3Q9NS15 1303 aa12.58□□□□□ -0.4
PTPN7-202ENST00000367279 CCDC160A6NGH7 325 aa12.57□□□□□ -0.4
PTPN7-202ENST00000367279 XPOTO43592 962 aaKnown RBP12.57□□□□□ -0.4
PTPN7-202ENST00000367279 AP1G2O75843 785 aa12.57□□□□□ -0.4
PTPN7-202ENST00000367279 FAM200BP0CF97 657 aa12.57□□□□□ -0.4
PTPN7-202ENST00000367279 CRABP2P29373 138 aa12.57□□□□□ -0.4
PTPN7-202ENST00000367279 DLG1Q12959 904 aa12.57□□□□□ -0.4
PTPN7-202ENST00000367279 GRM3Q14832 879 aa12.57□□□□□ -0.4
PTPN7-202ENST00000367279 POU6F1Q14863 301 aa12.57□□□□□ -0.4
PTPN7-202ENST00000367279 ZBTB6Q15916 424 aa12.57□□□□□ -0.4
PTPN7-202ENST00000367279 AP1ARQ63HQ0 302 aa12.57□□□□□ -0.4
PTPN7-202ENST00000367279 MAMDC4Q6UXC1 1216 aa12.57□□□□□ -0.4
PTPN7-202ENST00000367279 RNF111Q6ZNA4 994 aa12.57□□□□□ -0.4
PTPN7-202ENST00000367279 OTOP3Q7RTS5 596 aa12.57□□□□□ -0.4
PTPN7-202ENST00000367279 RNF135Q8IUD6 432 aa12.57□□□□□ -0.4
PTPN7-202ENST00000367279 FBXW8Q8N3Y1 598 aa12.57□□□□□ -0.4
PTPN7-202ENST00000367279 NPWQ8N729 165 aa12.57□□□□□ -0.4
PTPN7-202ENST00000367279 ICA1LQ8NDH6 482 aa12.57□□□□□ -0.4
PTPN7-202ENST00000367279 KCTD4Q8WVF5 259 aa12.57□□□□□ -0.4
PTPN7-202ENST00000367279 TMEM40Q8WWA1 233 aa12.57□□□□□ -0.4
PTPN7-202ENST00000367279 EIF2B3Q9NR50 452 aaKnown RBP12.57□□□□□ -0.4
PTPN7-202ENST00000367279 CAPN8A6NHC0 703 aa12.57□□□□□ -0.4
PTPN7-202ENST00000367279 AP2A1O95782 977 aa12.57□□□□□ -0.4
PTPN7-202ENST00000367279 GRIA4P48058 902 aa12.57□□□□□ -0.4
PTPN7-202ENST00000367279 LILRA4P59901 499 aa12.57□□□□□ -0.4
PTPN7-202ENST00000367279 MRPS22P82650 360 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms