RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 MYL4P12829 197 aa16.63■□□□□ 0.25
SCAF1-201ENST00000360565 CCNB1P14635 433 aa16.63■□□□□ 0.25
SCAF1-201ENST00000360565 NRLP54845 237 aa16.63■□□□□ 0.25
SCAF1-201ENST00000360565 USP4Q13107 963 aa16.63■□□□□ 0.25
SCAF1-201ENST00000360565 ARHGEF7Q14155 803 aa16.63■□□□□ 0.25
SCAF1-201ENST00000360565 EML3Q32P44 896 aa16.63■□□□□ 0.25
SCAF1-201ENST00000360565 SLC25A52Q3SY17 297 aa16.63■□□□□ 0.25
SCAF1-201ENST00000360565 PCDH20Q8N6Y1 951 aaKnown RBP16.63■□□□□ 0.25
SCAF1-201ENST00000360565 MID1IP1Q9NPA3 183 aa16.63■□□□□ 0.25
SCAF1-201ENST00000360565 CROTQ9UKG9 612 aa16.63■□□□□ 0.25
SCAF1-201ENST00000360565 PLA2G4CQ9UP65 541 aa16.63■□□□□ 0.25
SCAF1-201ENST00000360565 SMIM28A0A1B0GU29 152 aa16.62■□□□□ 0.25
SCAF1-201ENST00000360565 DPYSL4O14531 572 aa16.62■□□□□ 0.25
SCAF1-201ENST00000360565 MSCO60682 206 aa16.62■□□□□ 0.25
SCAF1-201ENST00000360565 KPNA6O60684 536 aa16.62■□□□□ 0.25
SCAF1-201ENST00000360565 RIPK1Q13546 671 aa16.62■□□□□ 0.25
SCAF1-201ENST00000360565 SLC10A6Q3KNW5 377 aa16.62■□□□□ 0.25
SCAF1-201ENST00000360565 FAM182AQ5T1J6 154 aa16.62■□□□□ 0.25
SCAF1-201ENST00000360565 UGT3A1Q6NUS8 523 aa16.62■□□□□ 0.25
SCAF1-201ENST00000360565 STRADAQ7RTN6 431 aa16.62■□□□□ 0.25
SCAF1-201ENST00000360565 ANKS1BQ7Z6G8 1248 aa16.62■□□□□ 0.25
SCAF1-201ENST00000360565 SLC41A1Q8IVJ1 513 aa16.62■□□□□ 0.25
SCAF1-201ENST00000360565 LMO3Q8TAP4 145 aa16.62■□□□□ 0.25
SCAF1-201ENST00000360565 KCTD4Q8WVF5 259 aa16.62■□□□□ 0.25
SCAF1-201ENST00000360565 SH3KBP1Q96B97 665 aa16.62■□□□□ 0.25
SCAF1-201ENST00000360565 MARK4Q96L34 752 aa16.62■□□□□ 0.25
SCAF1-201ENST00000360565 DUSP16Q9BY84 665 aa16.62■□□□□ 0.25
SCAF1-201ENST00000360565 PDGFDQ9GZP0 370 aaPredicted RBP16.62■□□□□ 0.25
SCAF1-201ENST00000360565 C5orf60A6NFR6 353 aa16.62■□□□□ 0.25
SCAF1-201ENST00000360565 BIRC5O15392 142 aa16.62■□□□□ 0.25
SCAF1-201ENST00000360565 TMEM63AO94886 807 aa16.62■□□□□ 0.25
SCAF1-201ENST00000360565 ASMTLO95671 621 aa16.62■□□□□ 0.25
SCAF1-201ENST00000360565 GABRB2P47870 512 aa16.62■□□□□ 0.25
SCAF1-201ENST00000360565 RAB27AP51159 221 aa16.62■□□□□ 0.25
SCAF1-201ENST00000360565 SP2Q02086 613 aa16.62■□□□□ 0.25
SCAF1-201ENST00000360565 CTBP1Q13363 440 aa16.62■□□□□ 0.25
SCAF1-201ENST00000360565 POLD3Q15054 466 aaPredicted RBP16.62■□□□□ 0.25
SCAF1-201ENST00000360565 SH3PXD2AQ5TCZ1 1133 aa16.62■□□□□ 0.25
SCAF1-201ENST00000360565 FAM171A1Q5VUB5 890 aa16.62■□□□□ 0.25
SCAF1-201ENST00000360565 TDRPQ86YL5 185 aa16.62■□□□□ 0.25
SCAF1-201ENST00000360565 PNPOQ9NVS9 261 aa16.62■□□□□ 0.25
SCAF1-201ENST00000360565 ADRA1BP35368 520 aa16.62■□□□□ 0.25
SCAF1-201ENST00000360565 AARS2Q5JTZ9 985 aaKnown RBP16.62■□□□□ 0.25
SCAF1-201ENST00000360565 NAIF1Q69YI7 327 aaPredicted RBP16.62■□□□□ 0.25
SCAF1-201ENST00000360565 GPR142Q7Z601 462 aa16.62■□□□□ 0.25
SCAF1-201ENST00000360565 GLIS1Q8NBF1 620 aa16.62■□□□□ 0.25
SCAF1-201ENST00000360565 PPTC7Q8NI37 304 aa16.62■□□□□ 0.25
SCAF1-201ENST00000360565 DACT3Q96B18 629 aaPredicted RBP16.62■□□□□ 0.25
SCAF1-201ENST00000360565 TMEM169Q96HH4 297 aa16.62■□□□□ 0.25
SCAF1-201ENST00000360565 CEP19Q96LK0 163 aa16.62■□□□□ 0.25
SCAF1-201ENST00000360565 CLPBQ9H078 707 aa16.62■□□□□ 0.25
SCAF1-201ENST00000360565 SCUBE2Q9NQ36 999 aa16.62■□□□□ 0.25
SCAF1-201ENST00000360565 TLR8Q9NR97 1041 aaKnown RBP16.62■□□□□ 0.25
SCAF1-201ENST00000360565 VPS28Q9UK41 221 aa16.62■□□□□ 0.25
SCAF1-201ENST00000360565 BLOC1S6Q9UL45 172 aa16.62■□□□□ 0.25
SCAF1-201ENST00000360565 C2CD4BA6NLJ0 364 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 H0YGN5 161 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 TRIM16O95361 564 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 SERPINA6P08185 405 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 EPHA3P29320 983 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 GRIA4P48058 902 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 MBTD1Q05BQ5 628 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 ENPEPQ07075 957 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 WASHC5Q12768 1159 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 DDX39BQ13838 428 aaKnown RBP16.61■□□□□ 0.25
SCAF1-201ENST00000360565 TMEM192Q8IY95 271 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 SLCO2A1Q92959 643 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 COPS7BQ9H9Q2 264 aaPredicted RBP16.61■□□□□ 0.25
SCAF1-201ENST00000360565 CAB39LQ9H9S4 337 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 ABCC13Q9NSE7 274 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 ZNF711Q9Y462 761 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 NFS1Q9Y697 457 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 ZNF541Q9H0D2 1346 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 SAC3D1A6NKF1 404 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 CFAP99D6REC4 459 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 HDAC3O15379 428 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 GSC2O15499 205 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 TBC1D4O60343 1298 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 HNRNPCP07910 306 aaKnown RBP eCLIP16.61■□□□□ 0.25
SCAF1-201ENST00000360565 YWHAQP27348 245 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 INPP1P49441 399 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 TTLL9Q3SXZ7 439 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 PCSK9Q8NBP7 692 aaKnown RBP16.61■□□□□ 0.25
SCAF1-201ENST00000360565 LPCAT1Q8NF37 534 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 RBBP8Q99708 897 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 TRPM5Q9NZQ8 1165 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 ALDH1A1P00352 501 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 HOXC6P09630 235 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 CCDC166P0CW27 439 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 SERPINH1P50454 418 aaKnown RBP16.61■□□□□ 0.25
SCAF1-201ENST00000360565 CERCAMQ5T4B2 595 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 FBXO39Q8N4B4 442 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 SPATA6LQ8N4H0 392 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 ADAM28Q9UKQ2 775 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 CLUHO75153 1309 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 EVPLLA8MZ36 301 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 ALDH2P05091 517 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 CKMP06732 381 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 NOVP48745 357 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 NR6A1Q15406 480 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms