RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 OR1E1P30953 314 aa17.46■□□□□ 0.39
TPM1-205ENST00000357980 FDFT1P37268 417 aa17.46■□□□□ 0.39
TPM1-205ENST00000357980 NTHL1P78549 312 aa17.46■□□□□ 0.39
TPM1-205ENST00000357980 MYO9BQ13459 2157 aa17.46■□□□□ 0.39
TPM1-205ENST00000357980 HIF1AQ16665 826 aa17.46■□□□□ 0.39
TPM1-205ENST00000357980 PARP15Q460N3 678 aa17.46■□□□□ 0.39
TPM1-205ENST00000357980 TEX44Q53QW1 395 aa17.46■□□□□ 0.39
TPM1-205ENST00000357980 CFAP58Q5T655 872 aa17.46■□□□□ 0.39
TPM1-205ENST00000357980 UBAP2Q5T6F2 1119 aaKnown RBP17.46■□□□□ 0.39
TPM1-205ENST00000357980 PDE4DIPQ5VU43 2346 aa17.46■□□□□ 0.39
TPM1-205ENST00000357980 CEP128Q6ZU80 1094 aa17.46■□□□□ 0.39
TPM1-205ENST00000357980 TRMT10CQ7L0Y3 403 aaKnown RBP17.46■□□□□ 0.39
TPM1-205ENST00000357980 CHST9Q7L1S5 443 aa17.46■□□□□ 0.39
TPM1-205ENST00000357980 GRASPQ7Z6J2 395 aaPredicted RBP17.46■□□□□ 0.39
TPM1-205ENST00000357980 CMTM8Q8IZV2 173 aa17.46■□□□□ 0.39
TPM1-205ENST00000357980 FATE1Q969F0 183 aa17.46■□□□□ 0.39
TPM1-205ENST00000357980 EXOC4Q96A65 974 aa17.46■□□□□ 0.39
TPM1-205ENST00000357980 ZIM3Q96PE6 472 aa17.46■□□□□ 0.39
TPM1-205ENST00000357980 CDC42EP4Q9H3Q1 356 aaKnown RBP17.46■□□□□ 0.39
TPM1-205ENST00000357980 TASP1Q9H6P5 420 aa17.46■□□□□ 0.39
TPM1-205ENST00000357980 CFAP97Q9P2B7 532 aa17.46■□□□□ 0.39
TPM1-205ENST00000357980 TRHDEQ9UKU6 1024 aa17.46■□□□□ 0.39
TPM1-205ENST00000357980 NFS1Q9Y697 457 aa17.46■□□□□ 0.39
TPM1-205ENST00000357980 SCAMP3O14828 347 aaKnown RBP17.45■□□□□ 0.38
TPM1-205ENST00000357980 MATN3O15232 486 aa17.45■□□□□ 0.38
TPM1-205ENST00000357980 RAMP2O60895 175 aa17.45■□□□□ 0.38
TPM1-205ENST00000357980 PEX11BO96011 259 aa17.45■□□□□ 0.38
TPM1-205ENST00000357980 APRTP07741 180 aa17.45■□□□□ 0.38
TPM1-205ENST00000357980 CCNB1P14635 433 aa17.45■□□□□ 0.38
TPM1-205ENST00000357980 TPSB2P20231 275 aa17.45■□□□□ 0.38
TPM1-205ENST00000357980 CD68P34810 354 aaPredicted RBP17.45■□□□□ 0.38
TPM1-205ENST00000357980 YBEYP58557 167 aaPredicted RBP17.45■□□□□ 0.38
TPM1-205ENST00000357980 CBLBQ13191 982 aa17.45■□□□□ 0.38
TPM1-205ENST00000357980 TPSAB1Q15661 275 aa17.45■□□□□ 0.38
TPM1-205ENST00000357980 PARP6Q2NL67 630 aa17.45■□□□□ 0.38
TPM1-205ENST00000357980 SYCP2LQ5T4T6 812 aa17.45■□□□□ 0.38
TPM1-205ENST00000357980 TTC39BQ5VTQ0 682 aaPredicted RBP17.45■□□□□ 0.38
TPM1-205ENST00000357980 TIGD7Q6NT04 549 aaPredicted RBP17.45■□□□□ 0.38
TPM1-205ENST00000357980 MRPL38Q96DV4 380 aaKnown RBP17.45■□□□□ 0.38
TPM1-205ENST00000357980 TEKT5Q96M29 485 aa17.45■□□□□ 0.38
TPM1-205ENST00000357980 IL12RB2Q99665 862 aa17.45■□□□□ 0.38
TPM1-205ENST00000357980 GORASP1Q9BQQ3 440 aa17.45■□□□□ 0.38
TPM1-205ENST00000357980 KLHL8Q9P2G9 620 aaPredicted RBP17.45■□□□□ 0.38
TPM1-205ENST00000357980 IPO11Q9UI26 975 aaKnown RBP17.45■□□□□ 0.38
TPM1-205ENST00000357980 LSM7Q9UK45 103 aaKnown RBP17.45■□□□□ 0.38
TPM1-205ENST00000357980 A0A1B0GVM2 712 aa17.44■□□□□ 0.38
TPM1-205ENST00000357980 TCAF2A6NFQ2 919 aa17.44■□□□□ 0.38
TPM1-205ENST00000357980 ARHGAP42A6NI28 874 aa17.44■□□□□ 0.38
TPM1-205ENST00000357980 E7ESA3 106 aa17.44■□□□□ 0.38
TPM1-205ENST00000357980 RFXAPO00287 272 aa17.44■□□□□ 0.38
TPM1-205ENST00000357980 LEFTY2O00292 366 aa17.44■□□□□ 0.38
TPM1-205ENST00000357980 ZBTB24O43167 697 aaPredicted RBP17.44■□□□□ 0.38
TPM1-205ENST00000357980 RIPK2O43353 540 aa17.44■□□□□ 0.38
TPM1-205ENST00000357980 CLDN11O75508 207 aa17.44■□□□□ 0.38
TPM1-205ENST00000357980 PSMB4P28070 264 aa17.44■□□□□ 0.38
TPM1-205ENST00000357980 POLD3Q15054 466 aaPredicted RBP17.44■□□□□ 0.38
TPM1-205ENST00000357980 ARHGAP15Q53QZ3 475 aa17.44■□□□□ 0.38
TPM1-205ENST00000357980 FNBP1LQ5T0N5 605 aa17.44■□□□□ 0.38
TPM1-205ENST00000357980 PID1Q7Z2X4 250 aa17.44■□□□□ 0.38
TPM1-205ENST00000357980 CNTD1Q8N815 330 aa17.44■□□□□ 0.38
TPM1-205ENST00000357980 MCUQ8NE86 351 aa17.44■□□□□ 0.38
TPM1-205ENST00000357980 MAML1Q92585 1016 aa17.44■□□□□ 0.38
TPM1-205ENST00000357980 TIFAQ96CG3 184 aa17.44■□□□□ 0.38
TPM1-205ENST00000357980 CDCA3Q99618 268 aaPredicted RBP17.44■□□□□ 0.38
TPM1-205ENST00000357980 SMG9Q9H0W8 520 aaKnown RBP17.44■□□□□ 0.38
TPM1-205ENST00000357980 GBA3Q9H227 469 aa17.44■□□□□ 0.38
TPM1-205ENST00000357980 ACBD3Q9H3P7 528 aa17.44■□□□□ 0.38
TPM1-205ENST00000357980 CCL26Q9Y258 94 aa17.44■□□□□ 0.38
TPM1-205ENST00000357980 PLAAQ9Y263 795 aa17.44■□□□□ 0.38
TPM1-205ENST00000357980 NUP210Q8TEM1 1887 aaPredicted RBP17.44■□□□□ 0.38
TPM1-205ENST00000357980 JCHAINP01591 159 aa17.44■□□□□ 0.38
TPM1-205ENST00000357980 ARL4CP56559 192 aa17.44■□□□□ 0.38
TPM1-205ENST00000357980 SERINC3Q13530 473 aa17.44■□□□□ 0.38
TPM1-205ENST00000357980 FASTKD3Q14CZ7 662 aaKnown RBP17.44■□□□□ 0.38
TPM1-205ENST00000357980 MSS51Q4VC12 460 aa17.44■□□□□ 0.38
TPM1-205ENST00000357980 CENPUQ71F23 418 aa17.44■□□□□ 0.38
TPM1-205ENST00000357980 C12orf76Q8N812 135 aaPredicted RBP17.44■□□□□ 0.38
TPM1-205ENST00000357980 OR52K2Q8NGK3 314 aa17.44■□□□□ 0.38
TPM1-205ENST00000357980 AGAP3Q96P47 875 aa17.44■□□□□ 0.38
TPM1-205ENST00000357980 EIF2B3Q9NR50 452 aaKnown RBP17.44■□□□□ 0.38
TPM1-205ENST00000357980 ZNF510Q9Y2H8 683 aa17.44■□□□□ 0.38
TPM1-205ENST00000357980 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.43■□□□□ 0.38
TPM1-205ENST00000357980 SPDYE4A6NLX3 237 aa17.43■□□□□ 0.38
TPM1-205ENST00000357980 EIF3HO15372 352 aaKnown RBP eCLIP17.43■□□□□ 0.38
TPM1-205ENST00000357980 TSPAN3O60637 253 aa17.43■□□□□ 0.38
TPM1-205ENST00000357980 TTC4O95801 387 aa17.43■□□□□ 0.38
TPM1-205ENST00000357980 NUDT17P0C025 328 aa17.43■□□□□ 0.38
TPM1-205ENST00000357980 AVPR1AP37288 418 aa17.43■□□□□ 0.38
TPM1-205ENST00000357980 MAGEA4P43358 317 aa17.43■□□□□ 0.38
TPM1-205ENST00000357980 CDK16Q00536 496 aa17.43■□□□□ 0.38
TPM1-205ENST00000357980 POTEHQ6S545 545 aa17.43■□□□□ 0.38
TPM1-205ENST00000357980 LRIG3Q6UXM1 1119 aa17.43■□□□□ 0.38
TPM1-205ENST00000357980 PPP1R21Q6ZMI0 780 aa17.43■□□□□ 0.38
TPM1-205ENST00000357980 ZNF534Q76KX8 674 aa17.43■□□□□ 0.38
TPM1-205ENST00000357980 CAND1Q86VP6 1230 aaKnown RBP17.43■□□□□ 0.38
TPM1-205ENST00000357980 BBS7Q8IWZ6 715 aa17.43■□□□□ 0.38
TPM1-205ENST00000357980 CPXM2Q8N436 756 aa17.43■□□□□ 0.38
TPM1-205ENST00000357980 RIN3Q8TB24 985 aa17.43■□□□□ 0.38
TPM1-205ENST00000357980 SMG7Q92540 1137 aaKnown RBP17.43■□□□□ 0.38
TPM1-205ENST00000357980 USP13Q92995 863 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms