RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 GJB6O95452 261 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 ERVK-10P10266 1014 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 DSG3P32926 999 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 TUBP50607 506 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 INO80DQ53TQ3 878 aaPredicted RBP15.09■□□□□ 0.01
CHD4-201ENST00000357008 ACMSDQ8TDX5 336 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 PTCD3Q96EY7 689 aaKnown RBP15.09■□□□□ 0.01
CHD4-201ENST00000357008 TEKT5Q96M29 485 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 HGH1Q9BTY7 390 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 REEP1Q9H902 201 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 YBX3P16989 372 aaKnown RBP eCLIP15.09■□□□□ 0.019e-7■□□□□ 10.6
CHD4-201ENST00000357008 BST1Q10588 318 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 EIF2B5Q13144 721 aaKnown RBP15.09■□□□□ 0.01
CHD4-201ENST00000357008 SQLEQ14534 574 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 OR7A2PQ8NGA2 310 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 ARHGEF3Q9NR81 526 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 SNX8Q9Y5X2 465 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 SLIT1O75093 1534 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 SPATA31A1Q5TZJ5 1347 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 RCCD1A6NED2 376 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 BTN3A1O00481 513 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 PAICSP22234 425 aaKnown RBP15.09■□□□□ 0.01
CHD4-201ENST00000357008 FLT3P36888 993 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 NAGLUP54802 743 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 MAMLD1Q13495 774 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 HERC6Q8IVU3 1022 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 ELMO3Q96BJ8 720 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 ARHGAP28Q9P2N2 729 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 LMTK2Q8IWU2 1503 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 SIGLEC16A6NMB1 481 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 C2CD2LO14523 706 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 RPLP2P05387 115 aaKnown RBP15.09■□□□□ 0.01
CHD4-201ENST00000357008 ABCB1P08183 1280 aaPredicted RBP15.09■□□□□ 0.01
CHD4-201ENST00000357008 PBLDP30039 288 aaPredicted RBP15.09■□□□□ 0.01
CHD4-201ENST00000357008 INTS5Q6P9B9 1019 aaKnown RBP15.09■□□□□ 0.01
CHD4-201ENST00000357008 AAGABQ6PD74 315 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 ABRAXAS1Q6UWZ7 409 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 LRRC55Q6ZSA7 311 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 VN1R5Q7Z5H4 357 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 TMEM169Q96HH4 297 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 CDK5RAP1Q96SZ6 601 aaKnown RBP15.09■□□□□ 0.01
CHD4-201ENST00000357008 PCDHA11Q9Y5I1 949 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 DYTNA2CJ06 578 aa15.08■□□□□ 0.01
CHD4-201ENST00000357008 DDTLA6NHG4 134 aaPredicted RBP15.08■□□□□ 0.01
CHD4-201ENST00000357008 PGM3O95394 542 aa15.08■□□□□ 0.01
CHD4-201ENST00000357008 LTFP02788 710 aa15.08■□□□□ 0.01
CHD4-201ENST00000357008 SNRPB2P08579 225 aaKnown RBP15.08■□□□□ 0.01
CHD4-201ENST00000357008 SAMD7Q7Z3H4 446 aa15.08■□□□□ 0.01
CHD4-201ENST00000357008 FBXO16Q8IX29 292 aaPredicted RBP15.08■□□□□ 0.01
CHD4-201ENST00000357008 MTIF3Q9H2K0 278 aaKnown RBP15.08■□□□□ 0.01
CHD4-201ENST00000357008 EPB41L4BQ9H329 900 aa15.08■□□□□ 0.01
CHD4-201ENST00000357008 ARMC7Q9H6L4 198 aa15.08■□□□□ 0.01
CHD4-201ENST00000357008 SNTG2Q9NY99 539 aa15.08■□□□□ 0.01
CHD4-201ENST00000357008 CLIC5Q9NZA1 410 aa15.08■□□□□ 0.01
CHD4-201ENST00000357008 A0A0A0MRY4 1105 aa15.08■□□□□ 0
CHD4-201ENST00000357008 ACKR2O00590 384 aa15.08■□□□□ 0
CHD4-201ENST00000357008 TRIM38O00635 465 aa15.08■□□□□ 0
CHD4-201ENST00000357008 CSDE1O75534 798 aaKnown RBP15.08■□□□□ 0
CHD4-201ENST00000357008 WFS1O76024 890 aa15.08■□□□□ 0
CHD4-201ENST00000357008 IL6P05231 212 aa15.08■□□□□ 0
CHD4-201ENST00000357008 TSPAN19P0C672 248 aa15.08■□□□□ 0
CHD4-201ENST00000357008 BMP6P22004 513 aa15.08■□□□□ 0
CHD4-201ENST00000357008 GRIA3P42263 894 aa15.08■□□□□ 0
CHD4-201ENST00000357008 TNK2Q07912 1038 aa15.08■□□□□ 0
CHD4-201ENST00000357008 CDC73Q6P1J9 531 aa15.08■□□□□ 0
CHD4-201ENST00000357008 ISLR2Q6UXK2 745 aa15.08■□□□□ 0
CHD4-201ENST00000357008 PSTKQ8IV42 348 aaKnown RBP15.08■□□□□ 0
CHD4-201ENST00000357008 SPATA13Q96N96 652 aa15.08■□□□□ 0
CHD4-201ENST00000357008 TLR8Q9NR97 1041 aaKnown RBP15.08■□□□□ 0
CHD4-201ENST00000357008 VAV3Q9UKW4 847 aa15.08■□□□□ 0
CHD4-201ENST00000357008 ATXN2Q99700 1313 aaKnown RBP15.08■□□□□ 0
CHD4-201ENST00000357008 CNTNAP2Q9UHC6 1331 aa15.08■□□□□ 0
CHD4-201ENST00000357008 CKMP06732 381 aa15.08■□□□□ 0
CHD4-201ENST00000357008 SERPINA6P08185 405 aa15.08■□□□□ 0
CHD4-201ENST00000357008 ADSSP30520 456 aa15.08■□□□□ 0
CHD4-201ENST00000357008 HNRNPH3P31942 346 aaKnown RBP15.08■□□□□ 0
CHD4-201ENST00000357008 TBX4P57082 545 aa15.08■□□□□ 0
CHD4-201ENST00000357008 PSME3P61289 254 aa15.08■□□□□ 0
CHD4-201ENST00000357008 PHKG1Q16816 387 aa15.08■□□□□ 0
CHD4-201ENST00000357008 FAM187BQ17R55 369 aa15.08■□□□□ 0
CHD4-201ENST00000357008 NEPROQ6NW34 567 aa15.08■□□□□ 0
CHD4-201ENST00000357008 FAM117BQ6P1L5 589 aa15.08■□□□□ 0
CHD4-201ENST00000357008 RP9Q8TA86 221 aaKnown RBP15.08■□□□□ 0
CHD4-201ENST00000357008 LNX1Q8TBB1 728 aaPredicted RBP15.08■□□□□ 0
CHD4-201ENST00000357008 BAP1Q92560 729 aa15.08■□□□□ 0
CHD4-201ENST00000357008 MBOAT7Q96N66 472 aa15.08■□□□□ 0
CHD4-201ENST00000357008 FBXO44Q9H4M3 255 aa15.08■□□□□ 0
CHD4-201ENST00000357008 ITGAVP06756 1048 aa15.08■□□□□ 0
CHD4-201ENST00000357008 CDH8P55286 799 aa15.08■□□□□ 0
CHD4-201ENST00000357008 PPP3CAQ08209 521 aa15.08■□□□□ 0
CHD4-201ENST00000357008 DDR1Q08345 913 aa15.08■□□□□ 0
CHD4-201ENST00000357008 DGCR6Q14129 220 aa15.08■□□□□ 0
CHD4-201ENST00000357008 RETSATQ6NUM9 610 aa15.08■□□□□ 0
CHD4-201ENST00000357008 WDR48Q8TAF3 677 aa15.08■□□□□ 0
CHD4-201ENST00000357008 MCRS1Q96EZ8 462 aa15.08■□□□□ 0
CHD4-201ENST00000357008 MTF2Q9Y483 593 aaPredicted RBP15.08■□□□□ 0
CHD4-201ENST00000357008 SF3B1O75533 1304 aaKnown RBP eCLIP15.08■□□□□ 04e-6■■■■■ 83.2
CHD4-201ENST00000357008 E5RJQ4 531 aa15.08■□□□□ 0
CHD4-201ENST00000357008 SHMT1P34896 483 aa15.08■□□□□ 0
CHD4-201ENST00000357008 AMPD2Q01433 879 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms