RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 LRG1P02750 347 aa11.21□□□□□ -0.62
GTF3C1-201ENST00000356183 TCF4P15884 667 aa11.21□□□□□ -0.62
GTF3C1-201ENST00000356183 MYL9P24844 172 aa11.21□□□□□ -0.62
GTF3C1-201ENST00000356183 NT5DC1Q5TFE4 455 aa11.21□□□□□ -0.62
GTF3C1-201ENST00000356183 ATG9AQ7Z3C6 839 aa11.21□□□□□ -0.62
GTF3C1-201ENST00000356183 MIB1Q86YT6 1006 aa11.21□□□□□ -0.62
GTF3C1-201ENST00000356183 KBTBD7Q8WVZ9 684 aa11.21□□□□□ -0.62
GTF3C1-201ENST00000356183 MTMR8Q96EF0 704 aa11.21□□□□□ -0.62
GTF3C1-201ENST00000356183 VPS35Q96QK1 796 aa11.21□□□□□ -0.62
GTF3C1-201ENST00000356183 CCDC28BQ9BUN5 200 aa11.21□□□□□ -0.62
GTF3C1-201ENST00000356183 TNKS2Q9H2K2 1166 aa11.21□□□□□ -0.62
GTF3C1-201ENST00000356183 DGKBQ9Y6T7 804 aa11.21□□□□□ -0.62
GTF3C1-201ENST00000356183 A0A0A6YYK5 440 aaPredicted RBP11.21□□□□□ -0.62
GTF3C1-201ENST00000356183 LOC110117498-PIK3R3F6TDL0 507 aa11.21□□□□□ -0.62
GTF3C1-201ENST00000356183 HAT1O14929 419 aa11.21□□□□□ -0.62
GTF3C1-201ENST00000356183 MBL2P11226 248 aaPredicted RBP11.21□□□□□ -0.62
GTF3C1-201ENST00000356183 COX7A2P14406 83 aa11.21□□□□□ -0.62
GTF3C1-201ENST00000356183 ITGALP20701 1170 aa11.21□□□□□ -0.62
GTF3C1-201ENST00000356183 FMO4P31512 558 aa11.21□□□□□ -0.62
GTF3C1-201ENST00000356183 CD151P48509 253 aa11.21□□□□□ -0.62
GTF3C1-201ENST00000356183 TRMT11Q7Z4G4 463 aaKnown RBP11.21□□□□□ -0.62
GTF3C1-201ENST00000356183 TTLL6Q8N841 843 aa11.21□□□□□ -0.62
GTF3C1-201ENST00000356183 C18orf25Q96B23 403 aaPredicted RBP11.21□□□□□ -0.62
GTF3C1-201ENST00000356183 ADGRE3Q9BY15 652 aa11.21□□□□□ -0.62
GTF3C1-201ENST00000356183 CRB1P82279 1406 aa11.21□□□□□ -0.62
GTF3C1-201ENST00000356183 PGAM1P18669 254 aa11.21□□□□□ -0.62
GTF3C1-201ENST00000356183 ARHGDIBP52566 201 aa11.21□□□□□ -0.62
GTF3C1-201ENST00000356183 TGM3Q08188 693 aa11.21□□□□□ -0.62
GTF3C1-201ENST00000356183 IER5Q5VY09 327 aa11.21□□□□□ -0.62
GTF3C1-201ENST00000356183 ZNF571Q7Z3V5 609 aaPredicted RBP11.21□□□□□ -0.62
GTF3C1-201ENST00000356183 LPCAT1Q8NF37 534 aa11.21□□□□□ -0.62
GTF3C1-201ENST00000356183 TARS2Q9BW92 718 aaKnown RBP11.21□□□□□ -0.62
GTF3C1-201ENST00000356183 STOML2Q9UJZ1 356 aa11.21□□□□□ -0.62
GTF3C1-201ENST00000356183 PRR12Q9ULL5 1215 aa11.21□□□□□ -0.62
GTF3C1-201ENST00000356183 CDC42BPBQ9Y5S2 1711 aa11.21□□□□□ -0.62
GTF3C1-201ENST00000356183 DYNC1LI2O43237 492 aaPredicted RBP11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 SNX3O60493 162 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 NCK1P16333 377 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 TAF6P49848 677 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 CDC42P60953 191 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 RFX4Q33E94 735 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 ZFP69Q49AA0 526 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 ARHGAP15Q53QZ3 475 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 SYT12Q8IV01 421 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 CLYBLQ8N0X4 340 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 TRPV3Q8NET8 790 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 OR56A4Q8NGH8 313 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 CELF1Q92879 486 aaKnown RBP11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 GMCL1Q96IK5 515 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 COX4I2Q96KJ9 171 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 GANQ9H2C0 597 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 STN1Q9H668 368 aaKnown RBP11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 ELP3Q9H9T3 547 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 TBC1D13Q9NVG8 400 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 TBC1D24Q9ULP9 559 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 FAM237BA0A1B0GVD1 139 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 A8MX80 341 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 ZNF24P17028 368 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 YY1P25490 414 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 GPR15P49685 360 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 AP1S2P56377 157 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 SNRPFP62306 86 aaKnown RBP11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 KCNJ2P63252 427 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 MYBPC1Q00872 1141 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 CYP24A1Q07973 514 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 CCNG2Q16589 344 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 C3orf67Q6ZVT6 689 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 SLITRK1Q96PX8 696 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 ZNF221Q9UK13 617 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 EME2A4GXA9 379 aaPredicted RBP11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 FAM86B1E9PN63 330 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 SLC26A4O43511 780 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 CRABP2P29373 138 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 ZNF543Q08ER8 600 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 ST3GAL1Q11201 340 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 SLC5A9Q2M3M2 681 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 NRKQ7Z2Y5 1582 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 OFCC1Q8IZS5 231 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 ZNF655Q8N720 491 aaPredicted RBP11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 SLC12A4Q9UP95 1085 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 A0A087X1B8 175 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 TSPAN3O60637 253 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 VPS4BO75351 444 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 CLUP10909 449 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 PTGS2P35354 604 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 IL2P60568 153 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 RAB2AP61019 212 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 FOXO4P98177 505 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 TNK2Q07912 1038 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 SMCO1Q147U7 214 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 THOC7Q6I9Y2 204 aaKnown RBP11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 SLCO6A1Q86UG4 719 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 ARMC8Q8IUR7 673 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 APOBEC3FQ8IUX4 373 aaKnown RBP11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 HASPINQ8TF76 798 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 MXRA8Q9BRK3 442 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 SEMA4BQ9NPR2 832 aaPredicted RBP11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 ATXN10Q9UBB4 475 aa11.2□□□□□ -0.62
GTF3C1-201ENST00000356183 MAPRE3Q9UPY8 281 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms