RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 NR4A1P22736 598 aa14.34□□□□□ -0.11
SREBF1-202ENST00000355815 LBRQ14739 615 aaKnown RBP14.34□□□□□ -0.11
SREBF1-202ENST00000355815 RNASEH2BQ5TBB1 312 aaKnown RBP14.34□□□□□ -0.11
SREBF1-202ENST00000355815 MFSD5Q6N075 450 aa14.34□□□□□ -0.11
SREBF1-202ENST00000355815 TRMT10BQ6PF06 316 aaKnown RBP14.34□□□□□ -0.11
SREBF1-202ENST00000355815 B3GNT9Q6UX72 402 aa14.34□□□□□ -0.11
SREBF1-202ENST00000355815 TBCBQ99426 244 aa14.34□□□□□ -0.11
SREBF1-202ENST00000355815 PCYT2Q99447 389 aa14.34□□□□□ -0.11
SREBF1-202ENST00000355815 PRDM12Q9H4Q4 367 aa14.34□□□□□ -0.11
SREBF1-202ENST00000355815 ARMC7Q9H6L4 198 aa14.34□□□□□ -0.11
SREBF1-202ENST00000355815 TMPRSS4Q9NRS4 437 aa14.34□□□□□ -0.11
SREBF1-202ENST00000355815 AP4B1Q9Y6B7 739 aa14.34□□□□□ -0.11
SREBF1-202ENST00000355815 A0A1B0GUL6 1792 aa14.34□□□□□ -0.11
SREBF1-202ENST00000355815 EP400Q96L91 3159 aa14.33□□□□□ -0.11
SREBF1-202ENST00000355815 INPP4BO15327 924 aa14.33□□□□□ -0.11
SREBF1-202ENST00000355815 GRIN3BO60391 1043 aa14.33□□□□□ -0.11
SREBF1-202ENST00000355815 LMO2P25791 158 aa14.33□□□□□ -0.11
SREBF1-202ENST00000355815 PSMB9P28065 219 aa14.33□□□□□ -0.11
SREBF1-202ENST00000355815 MTTPP55157 894 aa14.33□□□□□ -0.11
SREBF1-202ENST00000355815 YWHAZP63104 245 aaKnown RBP14.33□□□□□ -0.11
SREBF1-202ENST00000355815 IMPG1Q17R60 797 aa14.33□□□□□ -0.11
SREBF1-202ENST00000355815 ZIK1Q3SY52 487 aaPredicted RBP14.33□□□□□ -0.11
SREBF1-202ENST00000355815 CTU1Q7Z7A3 348 aaKnown RBP14.33□□□□□ -0.11
SREBF1-202ENST00000355815 CCDC117Q8IWD4 279 aaPredicted RBP14.33□□□□□ -0.11
SREBF1-202ENST00000355815 TTC39CQ8N584 583 aa14.33□□□□□ -0.11
SREBF1-202ENST00000355815 MTMR14Q8NCE2 650 aa14.33□□□□□ -0.11
SREBF1-202ENST00000355815 OR52K1Q8NGK4 314 aa14.33□□□□□ -0.11
SREBF1-202ENST00000355815 NIFKQ9BYG3 293 aaKnown RBP14.33□□□□□ -0.11
SREBF1-202ENST00000355815 CAB39Q9Y376 341 aaPredicted RBP14.33□□□□□ -0.11
SREBF1-202ENST00000355815 WBP4O75554 376 aaKnown RBP14.33□□□□□ -0.12
SREBF1-202ENST00000355815 SPAG6O75602 509 aa14.33□□□□□ -0.12
SREBF1-202ENST00000355815 DDHD2O94830 711 aa14.33□□□□□ -0.12
SREBF1-202ENST00000355815 TOP3BO95985 862 aaKnown RBP14.33□□□□□ -0.12
SREBF1-202ENST00000355815 SLC26A2P50443 739 aa14.33□□□□□ -0.12
SREBF1-202ENST00000355815 PLK1P53350 603 aa14.33□□□□□ -0.12
SREBF1-202ENST00000355815 PWP1Q13610 501 aa14.33□□□□□ -0.12
SREBF1-202ENST00000355815 ACSBG2Q5FVE4 666 aa14.33□□□□□ -0.12
SREBF1-202ENST00000355815 SPDYCQ5MJ68 293 aa14.33□□□□□ -0.12
SREBF1-202ENST00000355815 CMC1Q7Z7K0 106 aa14.33□□□□□ -0.12
SREBF1-202ENST00000355815 ULK4Q96C45 1275 aa14.33□□□□□ -0.12
SREBF1-202ENST00000355815 STRA6Q9BX79 667 aa14.33□□□□□ -0.12
SREBF1-202ENST00000355815 ACSS3Q9H6R3 686 aa14.33□□□□□ -0.12
SREBF1-202ENST00000355815 TRNAU1APQ9NX07 287 aaKnown RBP14.33□□□□□ -0.12
SREBF1-202ENST00000355815 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.33□□□□□ -0.12
SREBF1-202ENST00000355815 TBX10O75333 385 aa14.33□□□□□ -0.12
SREBF1-202ENST00000355815 FKBP9O95302 570 aa14.33□□□□□ -0.12
SREBF1-202ENST00000355815 PSMA4P25789 261 aaKnown RBP14.33□□□□□ -0.12
SREBF1-202ENST00000355815 BST2Q10589 180 aaKnown RBP14.33□□□□□ -0.12
SREBF1-202ENST00000355815 PARP6Q2NL67 630 aa14.33□□□□□ -0.12
SREBF1-202ENST00000355815 SGO1Q5FBB7 561 aa14.33□□□□□ -0.12
SREBF1-202ENST00000355815 LRRC38Q5VT99 294 aa14.33□□□□□ -0.12
SREBF1-202ENST00000355815 SLC27A1Q6PCB7 646 aa14.33□□□□□ -0.12
SREBF1-202ENST00000355815 FKBP9P1Q75LS8 142 aa14.33□□□□□ -0.12
SREBF1-202ENST00000355815 DGCR14Q96DF8 476 aaKnown RBP14.33□□□□□ -0.12
SREBF1-202ENST00000355815 APOPT1Q96IL0 206 aa14.33□□□□□ -0.12
SREBF1-202ENST00000355815 ZFRQ96KR1 1074 aaKnown RBP14.33□□□□□ -0.12
SREBF1-202ENST00000355815 PGLYRP2Q96PD5 576 aa14.33□□□□□ -0.12
SREBF1-202ENST00000355815 MTG1Q9BT17 334 aaPredicted RBP14.33□□□□□ -0.12
SREBF1-202ENST00000355815 ULBP1Q9BZM6 244 aa14.33□□□□□ -0.12
SREBF1-202ENST00000355815 NRDE2Q9H7Z3 1164 aa14.33□□□□□ -0.12
SREBF1-202ENST00000355815 POLR1BQ9H9Y6 1135 aa14.33□□□□□ -0.12
SREBF1-202ENST00000355815 ZNF839A8K0R7 811 aa14.32□□□□□ -0.12
SREBF1-202ENST00000355815 CFAP99D6REC4 459 aa14.32□□□□□ -0.12
SREBF1-202ENST00000355815 PHGDHO43175 533 aaKnown RBP14.32□□□□□ -0.12
SREBF1-202ENST00000355815 GLRA3O75311 464 aa14.32□□□□□ -0.12
SREBF1-202ENST00000355815 ATP6V1B2P21281 511 aa14.32□□□□□ -0.12
SREBF1-202ENST00000355815 PAX3P23760 479 aa14.32□□□□□ -0.12
SREBF1-202ENST00000355815 ZNF157P51786 506 aaPredicted RBP14.32□□□□□ -0.12
SREBF1-202ENST00000355815 STX5Q13190 355 aa14.32□□□□□ -0.12
SREBF1-202ENST00000355815 NR1D2Q14995 579 aa14.32□□□□□ -0.12
SREBF1-202ENST00000355815 ADRM1Q16186 407 aa14.32□□□□□ -0.12
SREBF1-202ENST00000355815 CCDC80Q76M96 950 aa14.32□□□□□ -0.12
SREBF1-202ENST00000355815 TFAP2DQ7Z6R9 452 aa14.32□□□□□ -0.12
SREBF1-202ENST00000355815 PLD5Q8N7P1 536 aa14.32□□□□□ -0.12
SREBF1-202ENST00000355815 SDCBP2Q9H190 292 aa14.32□□□□□ -0.12
SREBF1-202ENST00000355815 PCDH18Q9HCL0 1135 aa14.32□□□□□ -0.12
SREBF1-202ENST00000355815 RBPJLQ9UBG7 517 aa14.32□□□□□ -0.12
SREBF1-202ENST00000355815 ITGA11Q9UKX5 1188 aa14.32□□□□□ -0.12
SREBF1-202ENST00000355815 CITO14578 2027 aa14.32□□□□□ -0.12
SREBF1-202ENST00000355815 NR5A2O00482 541 aa14.32□□□□□ -0.12
SREBF1-202ENST00000355815 SCAMP3O14828 347 aaKnown RBP14.32□□□□□ -0.12
SREBF1-202ENST00000355815 HSPA1AP0DMV8 641 aaKnown RBP14.32□□□□□ -0.12
SREBF1-202ENST00000355815 HSPA1BP0DMV9 641 aaKnown RBP14.32□□□□□ -0.12
SREBF1-202ENST00000355815 ME2P23368 584 aa14.32□□□□□ -0.12
SREBF1-202ENST00000355815 PTPN7P35236 360 aa14.32□□□□□ -0.12
SREBF1-202ENST00000355815 SPIDRQ14159 915 aa14.32□□□□□ -0.12
SREBF1-202ENST00000355815 MAB21L3Q8N8X9 362 aa14.32□□□□□ -0.12
SREBF1-202ENST00000355815 TDRD5Q8NAT2 981 aaKnown RBP14.32□□□□□ -0.12
SREBF1-202ENST00000355815 TUBGCP3Q96CW5 907 aa14.32□□□□□ -0.12
SREBF1-202ENST00000355815 SYT11Q9BT88 431 aa14.32□□□□□ -0.12
SREBF1-202ENST00000355815 COG4Q9H9E3 785 aa14.32□□□□□ -0.12
SREBF1-202ENST00000355815 AFF4Q9UHB7 1163 aaKnown RBP14.32□□□□□ -0.12
SREBF1-202ENST00000355815 ATXN2Q99700 1313 aaKnown RBP14.32□□□□□ -0.12
SREBF1-202ENST00000355815 CNTNAP2Q9UHC6 1331 aa14.32□□□□□ -0.12
SREBF1-202ENST00000355815 SMIM31A0A1B0GVY4 71 aa14.32□□□□□ -0.12
SREBF1-202ENST00000355815 CXCL11O14625 94 aa14.32□□□□□ -0.12
SREBF1-202ENST00000355815 PAPSS1O43252 624 aaPredicted RBP14.32□□□□□ -0.12
SREBF1-202ENST00000355815 CILPO75339 1184 aa14.32□□□□□ -0.12
SREBF1-202ENST00000355815 PAMP19021 973 aa14.32□□□□□ -0.12
SREBF1-202ENST00000355815 THPOP40225 353 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms