RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 FUCA2Q9BTY2 467 aa17.2■□□□□ 0.34
PDLIM7-201ENST00000355572 BTBD1Q9H0C5 482 aa17.2■□□□□ 0.34
PDLIM7-201ENST00000355572 FBXL12Q9NXK8 326 aa17.2■□□□□ 0.34
PDLIM7-201ENST00000355572 STAP1Q9ULZ2 295 aa17.2■□□□□ 0.34
PDLIM7-201ENST00000355572 FNDC3AQ9Y2H6 1198 aaKnown RBP17.2■□□□□ 0.34
PDLIM7-201ENST00000355572 ACTL7AQ9Y615 435 aa17.2■□□□□ 0.34
PDLIM7-201ENST00000355572 IGLV3-10A0A075B6K4 115 aa17.19■□□□□ 0.34
PDLIM7-201ENST00000355572 TCRBV5S1A1TA0A578 114 aa17.19■□□□□ 0.34
PDLIM7-201ENST00000355572 TARSL2A2RTX5 802 aaKnown RBP17.19■□□□□ 0.34
PDLIM7-201ENST00000355572 E9PAM4 449 aa17.19■□□□□ 0.34
PDLIM7-201ENST00000355572 FAM72CH0Y354 149 aa17.19■□□□□ 0.34
PDLIM7-201ENST00000355572 KCNK3O14649 394 aa17.19■□□□□ 0.34
PDLIM7-201ENST00000355572 BCAT2O15382 392 aaPredicted RBP17.19■□□□□ 0.34
PDLIM7-201ENST00000355572 SMAD6O43541 496 aaKnown RBP17.19■□□□□ 0.34
PDLIM7-201ENST00000355572 ENDOD1O94919 500 aa17.19■□□□□ 0.34
PDLIM7-201ENST00000355572 FSBPO95073 299 aa17.19■□□□□ 0.34
PDLIM7-201ENST00000355572 MOCS3O95396 460 aa17.19■□□□□ 0.34
PDLIM7-201ENST00000355572 MBD3O95983 291 aa17.19■□□□□ 0.34
PDLIM7-201ENST00000355572 SRCP12931 536 aa17.19■□□□□ 0.34
PDLIM7-201ENST00000355572 SLC8A1P32418 973 aa17.19■□□□□ 0.34
PDLIM7-201ENST00000355572 STAT1P42224 750 aa17.19■□□□□ 0.34
PDLIM7-201ENST00000355572 CDH4P55283 916 aa17.19■□□□□ 0.34
PDLIM7-201ENST00000355572 ZBTB16Q05516 673 aa17.19■□□□□ 0.34
PDLIM7-201ENST00000355572 SLC12A1Q13621 1099 aa17.19■□□□□ 0.34
PDLIM7-201ENST00000355572 CDO1Q16878 200 aa17.19■□□□□ 0.34
PDLIM7-201ENST00000355572 POM121L1PQ3SYA9 428 aa17.19■□□□□ 0.34
PDLIM7-201ENST00000355572 FAM72AQ5TYM5 149 aa17.19■□□□□ 0.34
PDLIM7-201ENST00000355572 TTC39BQ5VTQ0 682 aaPredicted RBP17.19■□□□□ 0.34
PDLIM7-201ENST00000355572 FAM72DQ6L9T8 149 aa17.19■□□□□ 0.34
PDLIM7-201ENST00000355572 NCEH1Q6PIU2 408 aa17.19■□□□□ 0.34
PDLIM7-201ENST00000355572 Q6ZVU0 165 aa17.19■□□□□ 0.34
PDLIM7-201ENST00000355572 FAM72BQ86X60 149 aa17.19■□□□□ 0.34
PDLIM7-201ENST00000355572 ZNF677Q86XU0 584 aa17.19■□□□□ 0.34
PDLIM7-201ENST00000355572 OR7D4Q8NG98 312 aa17.19■□□□□ 0.34
PDLIM7-201ENST00000355572 RXFP2Q8WXD0 754 aa17.19■□□□□ 0.34
PDLIM7-201ENST00000355572 SPAG5Q96R06 1193 aa17.19■□□□□ 0.34
PDLIM7-201ENST00000355572 SYT11Q9BT88 431 aa17.19■□□□□ 0.34
PDLIM7-201ENST00000355572 FBRSQ9HAH7 460 aa17.19■□□□□ 0.34
PDLIM7-201ENST00000355572 TM9SF3Q9HD45 589 aa17.19■□□□□ 0.34
PDLIM7-201ENST00000355572 NDFIP2Q9NV92 336 aa17.19■□□□□ 0.34
PDLIM7-201ENST00000355572 RRN3Q9NYV6 651 aa17.19■□□□□ 0.34
PDLIM7-201ENST00000355572 MAP1BP46821 2468 aaKnown RBP17.19■□□□□ 0.34
PDLIM7-201ENST00000355572 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.18■□□□□ 0.34
PDLIM7-201ENST00000355572 FAM47DPA6NHR8 397 aa17.18■□□□□ 0.34
PDLIM7-201ENST00000355572 C2CD4BA6NLJ0 364 aa17.18■□□□□ 0.34
PDLIM7-201ENST00000355572 ATP9BO43861 1147 aa17.18■□□□□ 0.34
PDLIM7-201ENST00000355572 SH3BP5O60239 455 aa17.18■□□□□ 0.34
PDLIM7-201ENST00000355572 WNT1P04628 370 aa17.18■□□□□ 0.34
PDLIM7-201ENST00000355572 CTSLP07711 333 aa17.18■□□□□ 0.34
PDLIM7-201ENST00000355572 CEACAM1P13688 526 aa17.18■□□□□ 0.34
PDLIM7-201ENST00000355572 PPP2CBP62714 309 aa17.18■□□□□ 0.34
PDLIM7-201ENST00000355572 PPP2CAP67775 309 aa17.18■□□□□ 0.34
PDLIM7-201ENST00000355572 ZNF177Q13360 481 aaPredicted RBP17.18■□□□□ 0.34
PDLIM7-201ENST00000355572 CLEC16AQ2KHT3 1053 aa17.18■□□□□ 0.34
PDLIM7-201ENST00000355572 KIAA0895LQ68EN5 471 aa17.18■□□□□ 0.34
PDLIM7-201ENST00000355572 CAVIN1Q6NZI2 390 aaKnown RBP17.18■□□□□ 0.34
PDLIM7-201ENST00000355572 LINGO4Q6UY18 593 aa17.18■□□□□ 0.34
PDLIM7-201ENST00000355572 MON1BQ7L1V2 547 aa17.18■□□□□ 0.34
PDLIM7-201ENST00000355572 CCDC117Q8IWD4 279 aaPredicted RBP17.18■□□□□ 0.34
PDLIM7-201ENST00000355572 SH2D3CQ8N5H7 860 aa17.18■□□□□ 0.34
PDLIM7-201ENST00000355572 CCDC185Q8N715 623 aa17.18■□□□□ 0.34
PDLIM7-201ENST00000355572 NEK11Q8NG66 645 aa17.18■□□□□ 0.34
PDLIM7-201ENST00000355572 BAP1Q92560 729 aa17.18■□□□□ 0.34
PDLIM7-201ENST00000355572 PCMTD1Q96MG8 357 aaPredicted RBP17.18■□□□□ 0.34
PDLIM7-201ENST00000355572 TAS2R14Q9NYV8 317 aa17.18■□□□□ 0.34
PDLIM7-201ENST00000355572 SUSD2Q9UGT4 822 aa17.18■□□□□ 0.34
PDLIM7-201ENST00000355572 ADAMTS1Q9UHI8 967 aa17.18■□□□□ 0.34
PDLIM7-201ENST00000355572 VPS51Q9UID3 782 aa17.18■□□□□ 0.34
PDLIM7-201ENST00000355572 GOLGA6L22H0YM25 854 aa17.17■□□□□ 0.34
PDLIM7-201ENST00000355572 OPHN1O60890 802 aa17.17■□□□□ 0.34
PDLIM7-201ENST00000355572 SRGAP2O75044 1071 aa17.17■□□□□ 0.34
PDLIM7-201ENST00000355572 CLDN11O75508 207 aa17.17■□□□□ 0.34
PDLIM7-201ENST00000355572 RNASEH2AO75792 299 aaKnown RBP17.17■□□□□ 0.34
PDLIM7-201ENST00000355572 RHOCP08134 193 aa17.17■□□□□ 0.34
PDLIM7-201ENST00000355572 RRM1P23921 792 aa17.17■□□□□ 0.34
PDLIM7-201ENST00000355572 RDXP35241 583 aaKnown RBP17.17■□□□□ 0.34
PDLIM7-201ENST00000355572 RFC1P35251 1148 aaPredicted RBP17.17■□□□□ 0.34
PDLIM7-201ENST00000355572 ATXN3P54252 364 aaPredicted RBP17.17■□□□□ 0.34
PDLIM7-201ENST00000355572 HDAC4P56524 1084 aa17.17■□□□□ 0.34
PDLIM7-201ENST00000355572 SNX16P57768 344 aa17.17■□□□□ 0.34
PDLIM7-201ENST00000355572 FOXC1Q12948 553 aa17.17■□□□□ 0.34
PDLIM7-201ENST00000355572 DLG2Q15700 870 aa17.17■□□□□ 0.34
PDLIM7-201ENST00000355572 KIF19Q2TAC6 998 aa17.17■□□□□ 0.34
PDLIM7-201ENST00000355572 TTC31Q49AM3 519 aaPredicted RBP17.17■□□□□ 0.34
PDLIM7-201ENST00000355572 MANEALQ5VSG8 457 aa17.17■□□□□ 0.34
PDLIM7-201ENST00000355572 USP30Q70CQ3 517 aa17.17■□□□□ 0.34
PDLIM7-201ENST00000355572 HDDC3Q8N4P3 179 aa17.17■□□□□ 0.34
PDLIM7-201ENST00000355572 FAM131CQ96AQ9 280 aa17.17■□□□□ 0.34
PDLIM7-201ENST00000355572 SLC6A18Q96N87 628 aa17.17■□□□□ 0.34
PDLIM7-201ENST00000355572 NAP1L5Q96NT1 182 aaPredicted RBP17.17■□□□□ 0.34
PDLIM7-201ENST00000355572 CAAP1Q9H8G2 361 aa17.17■□□□□ 0.34
PDLIM7-201ENST00000355572 SGK2Q9HBY8 427 aa17.17■□□□□ 0.34
PDLIM7-201ENST00000355572 VPS28Q9UK41 221 aa17.17■□□□□ 0.34
PDLIM7-201ENST00000355572 SNX11Q9Y5W9 270 aa17.17■□□□□ 0.34
PDLIM7-201ENST00000355572 SPEGQ15772 3267 aa17.17■□□□□ 0.34
PDLIM7-201ENST00000355572 CABIN1Q9Y6J0 2220 aa17.17■□□□□ 0.34
PDLIM7-201ENST00000355572 TPRP12270 2363 aaKnown RBP17.16■□□□□ 0.34
PDLIM7-201ENST00000355572 UPK3BL1B0FP48 263 aa17.16■□□□□ 0.34
PDLIM7-201ENST00000355572 UPK3BL2E5RIL1 263 aa17.16■□□□□ 0.34
PDLIM7-201ENST00000355572 RTN2O75298 545 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms