RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 RRP1BQ14684 758 aaKnown RBP18.32■□□□□ 0.52
COL18A1-202ENST00000355480 DDR2Q16832 855 aa18.32■□□□□ 0.52
COL18A1-202ENST00000355480 PAGE2BQ5JRK9 111 aa18.32■□□□□ 0.52
COL18A1-202ENST00000355480 OTUD3Q5T2D3 398 aaPredicted RBP18.32■□□□□ 0.52
COL18A1-202ENST00000355480 ACSM2BQ68CK6 577 aa18.32■□□□□ 0.52
COL18A1-202ENST00000355480 IL27RAQ6UWB1 636 aa18.32■□□□□ 0.52
COL18A1-202ENST00000355480 RBM43Q6ZSC3 357 aaKnown RBP18.32■□□□□ 0.52
COL18A1-202ENST00000355480 DHFR2Q86XF0 187 aa18.32■□□□□ 0.52
COL18A1-202ENST00000355480 ASAH2Q9NR71 780 aa18.32■□□□□ 0.52
COL18A1-202ENST00000355480 BLOC1S4Q9NUP1 217 aa18.32■□□□□ 0.52
COL18A1-202ENST00000355480 HES2Q9Y543 173 aa18.32■□□□□ 0.52
COL18A1-202ENST00000355480 ANKDD1BA6NHY2 528 aa18.32■□□□□ 0.52
COL18A1-202ENST00000355480 NDUFS2O75306 463 aa18.32■□□□□ 0.52
COL18A1-202ENST00000355480 IL2P60568 153 aa18.32■□□□□ 0.52
COL18A1-202ENST00000355480 PARP6Q2NL67 630 aa18.32■□□□□ 0.52
COL18A1-202ENST00000355480 SCARA3Q6AZY7 606 aa18.32■□□□□ 0.52
COL18A1-202ENST00000355480 ZNF621Q6ZSS3 439 aa18.32■□□□□ 0.52
COL18A1-202ENST00000355480 DCLRE1BQ9H816 532 aa18.32■□□□□ 0.52
COL18A1-202ENST00000355480 ADAM30Q9UKF2 790 aa18.32■□□□□ 0.52
COL18A1-202ENST00000355480 A0A087X1B8 175 aa18.32■□□□□ 0.52
COL18A1-202ENST00000355480 MRASO14807 208 aa18.32■□□□□ 0.52
COL18A1-202ENST00000355480 IRF6O14896 467 aa18.32■□□□□ 0.52
COL18A1-202ENST00000355480 HDCP19113 662 aa18.32■□□□□ 0.52
COL18A1-202ENST00000355480 GSSP48637 474 aa18.32■□□□□ 0.52
COL18A1-202ENST00000355480 DPYSL3Q14195 570 aa18.32■□□□□ 0.52
COL18A1-202ENST00000355480 FAM163AQ96GL9 167 aaPredicted RBP18.32■□□□□ 0.52
COL18A1-202ENST00000355480 DUSP9Q99956 384 aaKnown RBP18.32■□□□□ 0.52
COL18A1-202ENST00000355480 ZFYVE1Q9HBF4 777 aa18.32■□□□□ 0.52
COL18A1-202ENST00000355480 H3BN98 237 aa18.31■□□□□ 0.52
COL18A1-202ENST00000355480 FKBP6O75344 327 aa18.31■□□□□ 0.52
COL18A1-202ENST00000355480 CORO7P57737 925 aa18.31■□□□□ 0.52
COL18A1-202ENST00000355480 SNRPD1P62314 119 aaKnown RBP18.31■□□□□ 0.52
COL18A1-202ENST00000355480 HDDC2Q7Z4H3 204 aa18.31■□□□□ 0.52
COL18A1-202ENST00000355480 DDHD1Q8NEL9 900 aa18.31■□□□□ 0.52
COL18A1-202ENST00000355480 ADI1Q9BV57 179 aa18.31■□□□□ 0.52
COL18A1-202ENST00000355480 C10orf88Q9H8K7 445 aa18.31■□□□□ 0.52
COL18A1-202ENST00000355480 ARHGAP28Q9P2N2 729 aa18.31■□□□□ 0.52
COL18A1-202ENST00000355480 TRUB2O95900 331 aaKnown RBP18.31■□□□□ 0.52
COL18A1-202ENST00000355480 CATP04040 527 aaKnown RBP18.31■□□□□ 0.52
COL18A1-202ENST00000355480 NPR3P17342 541 aa18.31■□□□□ 0.52
COL18A1-202ENST00000355480 FAAP100Q0VG06 881 aa18.31■□□□□ 0.52
COL18A1-202ENST00000355480 TOMM20Q15388 145 aa18.31■□□□□ 0.52
COL18A1-202ENST00000355480 C15orf59Q2T9L4 293 aaPredicted RBP18.31■□□□□ 0.52
COL18A1-202ENST00000355480 KIAA1324Q6UXG2 1013 aaKnown RBP18.31■□□□□ 0.52
COL18A1-202ENST00000355480 C16orf62Q7Z3J2 963 aa18.31■□□□□ 0.52
COL18A1-202ENST00000355480 COLGALT2Q8IYK4 626 aa18.31■□□□□ 0.52
COL18A1-202ENST00000355480 TMEM79Q9BSE2 394 aa18.31■□□□□ 0.52
COL18A1-202ENST00000355480 UBOX5O94941 541 aa18.31■□□□□ 0.52
COL18A1-202ENST00000355480 PAICSP22234 425 aaKnown RBP18.31■□□□□ 0.52
COL18A1-202ENST00000355480 NUP62P37198 522 aaPredicted RBP18.31■□□□□ 0.52
COL18A1-202ENST00000355480 DDR1Q08345 913 aa18.31■□□□□ 0.52
COL18A1-202ENST00000355480 ARMCX4Q5H9R4 360 aa18.31■□□□□ 0.52
COL18A1-202ENST00000355480 RXFP1Q9HBX9 757 aa18.31■□□□□ 0.52
COL18A1-202ENST00000355480 PEX1O43933 1283 aa18.31■□□□□ 0.52
COL18A1-202ENST00000355480 KDELR1P24390 212 aa18.31■□□□□ 0.52
COL18A1-202ENST00000355480 PSMB9P28065 219 aa18.31■□□□□ 0.52
COL18A1-202ENST00000355480 HNRNPH1P31943 449 aaKnown RBP18.31■□□□□ 0.52
COL18A1-202ENST00000355480 S100A3P33764 101 aa18.31■□□□□ 0.52
COL18A1-202ENST00000355480 MARSP56192 900 aaKnown RBP18.31■□□□□ 0.52
COL18A1-202ENST00000355480 NAB1Q13506 487 aa18.31■□□□□ 0.52
COL18A1-202ENST00000355480 NEK10Q6ZWH5 1172 aa18.31■□□□□ 0.52
COL18A1-202ENST00000355480 DET1Q7L5Y6 550 aa18.31■□□□□ 0.52
COL18A1-202ENST00000355480 BDH2Q9BUT1 245 aa18.31■□□□□ 0.52
COL18A1-202ENST00000355480 CD248Q9HCU0 757 aa18.31■□□□□ 0.52
COL18A1-202ENST00000355480 MRPS23Q9Y3D9 190 aaKnown RBP18.31■□□□□ 0.52
COL18A1-202ENST00000355480 MEI4A8MW99 385 aa18.31■□□□□ 0.52
COL18A1-202ENST00000355480 HOXB8P17481 243 aaPredicted RBP18.31■□□□□ 0.52
COL18A1-202ENST00000355480 AMD1P17707 334 aa18.31■□□□□ 0.52
COL18A1-202ENST00000355480 GLRA2P23416 452 aa18.31■□□□□ 0.52
COL18A1-202ENST00000355480 FLT3P36888 993 aa18.31■□□□□ 0.52
COL18A1-202ENST00000355480 SPIDRQ14159 915 aa18.31■□□□□ 0.52
COL18A1-202ENST00000355480 TCEA2Q15560 299 aa18.31■□□□□ 0.52
COL18A1-202ENST00000355480 DGKKQ5KSL6 1271 aa18.31■□□□□ 0.52
COL18A1-202ENST00000355480 ZNF655Q8N720 491 aaPredicted RBP18.31■□□□□ 0.52
COL18A1-202ENST00000355480 HELQQ8TDG4 1101 aa18.31■□□□□ 0.52
COL18A1-202ENST00000355480 SOHLH2Q9NX45 425 aa18.31■□□□□ 0.52
COL18A1-202ENST00000355480 FAM198AQ9UFP1 575 aa18.31■□□□□ 0.52
COL18A1-202ENST00000355480 H3BMM5 538 aa18.3■□□□□ 0.52
COL18A1-202ENST00000355480 CD86P42081 329 aa18.3■□□□□ 0.52
COL18A1-202ENST00000355480 TMED10P49755 219 aaKnown RBP18.3■□□□□ 0.52
COL18A1-202ENST00000355480 POM121L1PQ3SYA9 428 aa18.3■□□□□ 0.52
COL18A1-202ENST00000355480 TCHHL1Q5QJ38 904 aaPredicted RBP18.3■□□□□ 0.52
COL18A1-202ENST00000355480 NOL9Q5SY16 702 aaKnown RBP18.3■□□□□ 0.52
COL18A1-202ENST00000355480 IZUMO2Q6UXV1 221 aa18.3■□□□□ 0.52
COL18A1-202ENST00000355480 VSIG10LQ86VR7 867 aa18.3■□□□□ 0.52
COL18A1-202ENST00000355480 ELMO1Q92556 727 aa18.3■□□□□ 0.52
COL18A1-202ENST00000355480 GUCY1B2O75343 617 aa18.3■□□□□ 0.52
COL18A1-202ENST00000355480 ETS1P14921 441 aa18.3■□□□□ 0.52
COL18A1-202ENST00000355480 VAV1P15498 845 aa18.3■□□□□ 0.52
COL18A1-202ENST00000355480 JAK1P23458 1154 aa18.3■□□□□ 0.52
COL18A1-202ENST00000355480 NOMO2Q5JPE7 1267 aa18.3■□□□□ 0.52
COL18A1-202ENST00000355480 KCNK18Q7Z418 384 aa18.3■□□□□ 0.52
COL18A1-202ENST00000355480 STARD8Q92502 1023 aa18.3■□□□□ 0.52
COL18A1-202ENST00000355480 AGXT2Q9BYV1 514 aa18.3■□□□□ 0.52
COL18A1-202ENST00000355480 SEMA4BQ9NPR2 832 aaPredicted RBP18.3■□□□□ 0.52
COL18A1-202ENST00000355480 L1RE1Q9UN81 338 aa18.3■□□□□ 0.52
COL18A1-202ENST00000355480 PHGDHO43175 533 aaKnown RBP18.3■□□□□ 0.52
COL18A1-202ENST00000355480 COX7A2P14406 83 aa18.3■□□□□ 0.52
COL18A1-202ENST00000355480 DLG4P78352 724 aa18.3■□□□□ 0.52
COL18A1-202ENST00000355480 SP3Q02447 781 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms