RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 ARHGAP42A6NI28 874 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 TRDMT1O14717 391 aaKnown RBP9.84□□□□□ -0.83
NPHP1-202ENST00000355301 MAP2K7O14733 419 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 MATN3O15232 486 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 CHADO15335 359 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 PPFIA2O75334 1257 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 METTL18O95568 372 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 TCF3P15923 654 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 CEBPBP17676 345 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 CHKAP35790 457 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 HSPA9P38646 679 aaKnown RBP9.84□□□□□ -0.83
NPHP1-202ENST00000355301 TNNT3P45378 269 aaPredicted RBP9.84□□□□□ -0.83
NPHP1-202ENST00000355301 SGSHP51688 502 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 IFI35P80217 286 aaPredicted RBP9.84□□□□□ -0.83
NPHP1-202ENST00000355301 BASP1P80723 227 aaKnown RBP9.84□□□□□ -0.83
NPHP1-202ENST00000355301 KCNJ11Q14654 390 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 CASP8Q14790 479 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 POLD3Q15054 466 aaPredicted RBP9.84□□□□□ -0.83
NPHP1-202ENST00000355301 TEX44Q53QW1 395 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 TCEAL5Q5H9L2 206 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 C6orf118Q5T5N4 469 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 TIGD7Q6NT04 549 aaPredicted RBP9.84□□□□□ -0.83
NPHP1-202ENST00000355301 POTEHQ6S545 545 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 ARHGEF18Q6ZSZ5 1173 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 SETD3Q86TU7 594 aaPredicted RBP9.84□□□□□ -0.83
NPHP1-202ENST00000355301 BBS7Q8IWZ6 715 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 ZCCHC9Q8N567 271 aaKnown RBP9.84□□□□□ -0.83
NPHP1-202ENST00000355301 HJURPQ8NCD3 748 aaPredicted RBP9.84□□□□□ -0.83
NPHP1-202ENST00000355301 DEPDC1BQ8WUY9 529 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 PRCCQ92733 491 aaPredicted RBP9.84□□□□□ -0.83
NPHP1-202ENST00000355301 HMCESQ96FZ2 354 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 ZSWIM3Q96MP5 696 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 SEPT10Q9P0V9 454 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 IPO11Q9UI26 975 aaKnown RBP9.84□□□□□ -0.83
NPHP1-202ENST00000355301 TRHDEQ9UKU6 1024 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 TBC1D30Q9Y2I9 924 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 SHROOM3Q8TF72 1996 aa9.83□□□□□ -0.84
NPHP1-202ENST00000355301 ILVBLA1L0T0 632 aa9.83□□□□□ -0.84
NPHP1-202ENST00000355301 TYW5A2RUC4 315 aaKnown RBP9.83□□□□□ -0.84
NPHP1-202ENST00000355301 SCAMP3O14828 347 aaKnown RBP9.83□□□□□ -0.84
NPHP1-202ENST00000355301 TSPAN3O60637 253 aa9.83□□□□□ -0.84
NPHP1-202ENST00000355301 SASH3O75995 380 aa9.83□□□□□ -0.84
NPHP1-202ENST00000355301 PRAMEF12O95522 483 aa9.83□□□□□ -0.84
NPHP1-202ENST00000355301 CCNB1P14635 433 aa9.83□□□□□ -0.84
NPHP1-202ENST00000355301 WEE1P30291 646 aa9.83□□□□□ -0.84
NPHP1-202ENST00000355301 DHX9Q08211 1270 aaKnown RBP9.83□□□□□ -0.84
NPHP1-202ENST00000355301 ZBTB17Q13105 803 aa9.83□□□□□ -0.84
NPHP1-202ENST00000355301 SERINC3Q13530 473 aa9.83□□□□□ -0.84
NPHP1-202ENST00000355301 SEMA5AQ13591 1074 aa9.83□□□□□ -0.84
NPHP1-202ENST00000355301 SLMAPQ14BN4 828 aa9.83□□□□□ -0.84
NPHP1-202ENST00000355301 FAM182AQ5T1J6 154 aa9.83□□□□□ -0.84
NPHP1-202ENST00000355301 MPP7Q5T2T1 576 aa9.83□□□□□ -0.84
NPHP1-202ENST00000355301 ANKRD22Q5VYY1 191 aa9.83□□□□□ -0.84
NPHP1-202ENST00000355301 GPR149Q86SP6 731 aa9.83□□□□□ -0.84
NPHP1-202ENST00000355301 RIN3Q8TB24 985 aa9.83□□□□□ -0.84
NPHP1-202ENST00000355301 ITFG1Q8TB96 612 aa9.83□□□□□ -0.84
NPHP1-202ENST00000355301 TMA16Q96EY4 203 aaKnown RBP9.83□□□□□ -0.84
NPHP1-202ENST00000355301 TEKT5Q96M29 485 aa9.83□□□□□ -0.84
NPHP1-202ENST00000355301 IL12RB2Q99665 862 aa9.83□□□□□ -0.84
NPHP1-202ENST00000355301 CEP41Q9BYV8 373 aa9.83□□□□□ -0.84
NPHP1-202ENST00000355301 PHACTR1Q9C0D0 580 aa9.83□□□□□ -0.84
NPHP1-202ENST00000355301 MAGEH1Q9H213 219 aa9.83□□□□□ -0.84
NPHP1-202ENST00000355301 VIPAS39Q9H9C1 493 aa9.83□□□□□ -0.84
NPHP1-202ENST00000355301 ETNK1Q9HBU6 452 aa9.83□□□□□ -0.84
NPHP1-202ENST00000355301 IGSF9Q9P2J2 1179 aa9.83□□□□□ -0.84
NPHP1-202ENST00000355301 NUP210Q8TEM1 1887 aaPredicted RBP9.83□□□□□ -0.84
NPHP1-202ENST00000355301 MYO9BQ13459 2157 aa9.82□□□□□ -0.84
NPHP1-202ENST00000355301 TMEM265A0A087WTH1 108 aa9.82□□□□□ -0.84
NPHP1-202ENST00000355301 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.82□□□□□ -0.84
NPHP1-202ENST00000355301 TCRBV7S3A2A0A539 114 aa9.82□□□□□ -0.84
NPHP1-202ENST00000355301 LINC01565O15544 149 aa9.82□□□□□ -0.84
NPHP1-202ENST00000355301 TMEM63AO94886 807 aa9.82□□□□□ -0.84
NPHP1-202ENST00000355301 PEX11BO96011 259 aa9.82□□□□□ -0.84
NPHP1-202ENST00000355301 HOXB8P17481 243 aaPredicted RBP9.82□□□□□ -0.84
NPHP1-202ENST00000355301 FDFT1P37268 417 aa9.82□□□□□ -0.84
NPHP1-202ENST00000355301 GNA12Q03113 381 aa9.82□□□□□ -0.84
NPHP1-202ENST00000355301 USP4Q13107 963 aa9.82□□□□□ -0.84
NPHP1-202ENST00000355301 ZNF177Q13360 481 aaPredicted RBP9.82□□□□□ -0.84
NPHP1-202ENST00000355301 HNRNPDQ14103 355 aaKnown RBP9.82□□□□□ -0.84
NPHP1-202ENST00000355301 CBX2Q14781 532 aaPredicted RBP9.82□□□□□ -0.84
NPHP1-202ENST00000355301 ZNF77Q15935 545 aa9.82□□□□□ -0.84
NPHP1-202ENST00000355301 PARP6Q2NL67 630 aa9.82□□□□□ -0.84
NPHP1-202ENST00000355301 ANO4Q32M45 955 aa9.82□□□□□ -0.84
NPHP1-202ENST00000355301 SPDYCQ5MJ68 293 aa9.82□□□□□ -0.84
NPHP1-202ENST00000355301 RARS2Q5T160 578 aaKnown RBP9.82□□□□□ -0.84
NPHP1-202ENST00000355301 RNF43Q68DV7 783 aa9.82□□□□□ -0.84
NPHP1-202ENST00000355301 ANKRD54Q6NXT1 300 aa9.82□□□□□ -0.84
NPHP1-202ENST00000355301 SYCE2Q6PIF2 218 aa9.82□□□□□ -0.84
NPHP1-202ENST00000355301 ZNF783Q6ZMS7 281 aa9.82□□□□□ -0.84
NPHP1-202ENST00000355301 CEP128Q6ZU80 1094 aa9.82□□□□□ -0.84
NPHP1-202ENST00000355301 PID1Q7Z2X4 250 aa9.82□□□□□ -0.84
NPHP1-202ENST00000355301 RELL1Q8IUW5 271 aa9.82□□□□□ -0.84
NPHP1-202ENST00000355301 ARID3BQ8IVW6 561 aaPredicted RBP9.82□□□□□ -0.84
NPHP1-202ENST00000355301 TAB3Q8N5C8 712 aaPredicted RBP9.82□□□□□ -0.84
NPHP1-202ENST00000355301 TDRD5Q8NAT2 981 aaKnown RBP9.82□□□□□ -0.84
NPHP1-202ENST00000355301 TTC16Q8NEE8 873 aa9.82□□□□□ -0.84
NPHP1-202ENST00000355301 ING5Q8WYH8 240 aa9.82□□□□□ -0.84
NPHP1-202ENST00000355301 MAML1Q92585 1016 aa9.82□□□□□ -0.84
NPHP1-202ENST00000355301 ARHGEF2Q92974 986 aaKnown RBP9.82□□□□□ -0.84
NPHP1-202ENST00000355301 EXOC4Q96A65 974 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms