RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 ACVR1CQ8NER5 493 aa15.89■□□□□ 0.13
MBD1-205ENST00000353909 DBF4BQ8NFT6 615 aa15.89■□□□□ 0.13
MBD1-205ENST00000353909 ATP2A3Q93084 1043 aa15.89■□□□□ 0.13
MBD1-205ENST00000353909 TRIM55Q9BYV6 548 aa15.89■□□□□ 0.13
MBD1-205ENST00000353909 CRISPLD1Q9H336 500 aa15.89■□□□□ 0.13
MBD1-205ENST00000353909 GPBP1L1Q9HC44 474 aaPredicted RBP15.89■□□□□ 0.13
MBD1-205ENST00000353909 ARHGEF3Q9NR81 526 aa15.89■□□□□ 0.13
MBD1-205ENST00000353909 BFARQ9NZS9 450 aa15.89■□□□□ 0.13
MBD1-205ENST00000353909 MARCOQ9UEW3 520 aaPredicted RBP15.89■□□□□ 0.13
MBD1-205ENST00000353909 SLC27A5Q9Y2P5 690 aa15.89■□□□□ 0.13
MBD1-205ENST00000353909 NYNRINQ9P2P1 1898 aaKnown RBP15.89■□□□□ 0.13
MBD1-205ENST00000353909 MAFKO60675 156 aa15.88■□□□□ 0.13
MBD1-205ENST00000353909 ALDH3A1P30838 453 aa15.88■□□□□ 0.13
MBD1-205ENST00000353909 TUBP50607 506 aa15.88■□□□□ 0.13
MBD1-205ENST00000353909 TCTN1Q2MV58 587 aa15.88■□□□□ 0.13
MBD1-205ENST00000353909 HSF5Q4G112 596 aaPredicted RBP15.88■□□□□ 0.13
MBD1-205ENST00000353909 ANKRD20A4Q4UJ75 823 aa15.88■□□□□ 0.13
MBD1-205ENST00000353909 FAM171A1Q5VUB5 890 aa15.88■□□□□ 0.13
MBD1-205ENST00000353909 RSPO2Q6UXX9 243 aaPredicted RBP15.88■□□□□ 0.13
MBD1-205ENST00000353909 TIFABQ6ZNK6 161 aa15.88■□□□□ 0.13
MBD1-205ENST00000353909 KDELC2Q7Z4H8 507 aa15.88■□□□□ 0.13
MBD1-205ENST00000353909 NUDCD3Q8IVD9 361 aa15.88■□□□□ 0.13
MBD1-205ENST00000353909 E2F7Q96AV8 911 aa15.88■□□□□ 0.13
MBD1-205ENST00000353909 CREBZFQ9NS37 354 aa15.88■□□□□ 0.13
MBD1-205ENST00000353909 SIRPGQ9P1W8 387 aa15.88■□□□□ 0.13
MBD1-205ENST00000353909 HEY2Q9UBP5 337 aa15.88■□□□□ 0.13
MBD1-205ENST00000353909 TRHDEQ9UKU6 1024 aa15.88■□□□□ 0.13
MBD1-205ENST00000353909 MOXD2PA6NHM9 499 aa15.88■□□□□ 0.13
MBD1-205ENST00000353909 KITP10721 976 aa15.88■□□□□ 0.13
MBD1-205ENST00000353909 NMBRP28336 390 aa15.88■□□□□ 0.13
MBD1-205ENST00000353909 PDE1BQ01064 536 aa15.88■□□□□ 0.13
MBD1-205ENST00000353909 PIK3R6Q5UE93 754 aa15.88■□□□□ 0.13
MBD1-205ENST00000353909 CCNJLQ8IV13 435 aa15.88■□□□□ 0.13
MBD1-205ENST00000353909 UTP4Q969X6 686 aaKnown RBP15.88■□□□□ 0.13
MBD1-205ENST00000353909 HAPLN3Q96S86 360 aa15.88■□□□□ 0.13
MBD1-205ENST00000353909 NAT9Q9BTE0 207 aa15.88■□□□□ 0.13
MBD1-205ENST00000353909 TMEM120AQ9BXJ8 343 aa15.88■□□□□ 0.13
MBD1-205ENST00000353909 LRRC40Q9H9A6 602 aa15.88■□□□□ 0.13
MBD1-205ENST00000353909 CAB39LQ9H9S4 337 aa15.88■□□□□ 0.13
MBD1-205ENST00000353909 MKS1Q9NXB0 559 aa15.88■□□□□ 0.13
MBD1-205ENST00000353909 GMIPQ9P107 970 aa15.88■□□□□ 0.13
MBD1-205ENST00000353909 KCNU1A8MYU2 1149 aa15.87■□□□□ 0.13
MBD1-205ENST00000353909 DCTN3O75935 186 aa15.87■□□□□ 0.13
MBD1-205ENST00000353909 PRKCGP05129 697 aa15.87■□□□□ 0.13
MBD1-205ENST00000353909 SERPINB3P29508 390 aa15.87■□□□□ 0.13
MBD1-205ENST00000353909 PPP2R5DQ14738 602 aa15.87■□□□□ 0.13
MBD1-205ENST00000353909 DLG2Q15700 870 aa15.87■□□□□ 0.13
MBD1-205ENST00000353909 CTC1Q2NKJ3 1217 aa15.87■□□□□ 0.13
MBD1-205ENST00000353909 BRMS1LQ5PSV4 323 aa15.87■□□□□ 0.13
MBD1-205ENST00000353909 N4BP2L1Q5TBK1 243 aaPredicted RBP15.87■□□□□ 0.13
MBD1-205ENST00000353909 ATG14Q6ZNE5 492 aa15.87■□□□□ 0.13
MBD1-205ENST00000353909 BEND5Q7L4P6 421 aa15.87■□□□□ 0.13
MBD1-205ENST00000353909 TFAP2DQ7Z6R9 452 aa15.87■□□□□ 0.13
MBD1-205ENST00000353909 CLNKQ7Z7G1 428 aa15.87■□□□□ 0.13
MBD1-205ENST00000353909 TTC7BQ86TV6 843 aa15.87■□□□□ 0.13
MBD1-205ENST00000353909 TMEM173Q86WV6 379 aaPredicted RBP15.87■□□□□ 0.13
MBD1-205ENST00000353909 ATPAF2Q8N5M1 289 aa15.87■□□□□ 0.13
MBD1-205ENST00000353909 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.87■□□□□ 0.13
MBD1-205ENST00000353909 URGCPQ8TCY9 931 aa15.87■□□□□ 0.13
MBD1-205ENST00000353909 FAM193BQ96PV7 902 aaPredicted RBP15.87■□□□□ 0.13
MBD1-205ENST00000353909 BRD8Q9H0E9 1235 aa15.87■□□□□ 0.13
MBD1-205ENST00000353909 ATXN3LQ9H3M9 355 aa15.87■□□□□ 0.13
MBD1-205ENST00000353909 E9PAM4 449 aa15.87■□□□□ 0.13
MBD1-205ENST00000353909 MTSS1O43312 755 aa15.87■□□□□ 0.13
MBD1-205ENST00000353909 BPGMP07738 259 aa15.87■□□□□ 0.13
MBD1-205ENST00000353909 MYL2P10916 166 aa15.87■□□□□ 0.13
MBD1-205ENST00000353909 KCNA4P22459 653 aa15.87■□□□□ 0.13
MBD1-205ENST00000353909 RPL10AP62906 217 aaKnown RBP15.87■□□□□ 0.13
MBD1-205ENST00000353909 CTXN3Q4LDR2 81 aa15.87■□□□□ 0.13
MBD1-205ENST00000353909 SPANXN3Q5MJ09 141 aa15.87■□□□□ 0.13
MBD1-205ENST00000353909 LRRC8DQ7L1W4 858 aa15.87■□□□□ 0.13
MBD1-205ENST00000353909 NUP93Q8N1F7 819 aa15.87■□□□□ 0.13
MBD1-205ENST00000353909 SLC43A3Q8NBI5 491 aa15.87■□□□□ 0.13
MBD1-205ENST00000353909 BAIAP2L1Q9UHR4 511 aa15.87■□□□□ 0.13
MBD1-205ENST00000353909 CFAP73A6NFT4 308 aa15.86■□□□□ 0.13
MBD1-205ENST00000353909 ARFIP2P53365 341 aa15.86■□□□□ 0.13
MBD1-205ENST00000353909 ITPRIPL1Q6GPH6 555 aa15.86■□□□□ 0.13
MBD1-205ENST00000353909 STRA8Q7Z7C7 330 aa15.86■□□□□ 0.13
MBD1-205ENST00000353909 IPMKQ8NFU5 416 aa15.86■□□□□ 0.13
MBD1-205ENST00000353909 SLC7A6OSQ96CW6 309 aaPredicted RBP15.86■□□□□ 0.13
MBD1-205ENST00000353909 TMEM216Q9P0N5 145 aa15.86■□□□□ 0.13
MBD1-205ENST00000353909 ZFP69BQ9UJL9 534 aa15.86■□□□□ 0.13
MBD1-205ENST00000353909 KLF11O14901 512 aa15.86■□□□□ 0.13
MBD1-205ENST00000353909 HOXC13P31276 330 aa15.86■□□□□ 0.13
MBD1-205ENST00000353909 GP5P40197 560 aa15.86■□□□□ 0.13
MBD1-205ENST00000353909 OCRLQ01968 901 aa15.86■□□□□ 0.13
MBD1-205ENST00000353909 DEFB115Q30KQ5 88 aa15.86■□□□□ 0.13
MBD1-205ENST00000353909 TEDDM1Q5T9Z0 273 aa15.86■□□□□ 0.13
MBD1-205ENST00000353909 FSTL4Q6MZW2 842 aa15.86■□□□□ 0.13
MBD1-205ENST00000353909 MIB1Q86YT6 1006 aa15.86■□□□□ 0.13
MBD1-205ENST00000353909 ARID3BQ8IVW6 561 aaPredicted RBP15.86■□□□□ 0.13
MBD1-205ENST00000353909 PLD6Q8N2A8 252 aaKnown RBP15.86■□□□□ 0.13
MBD1-205ENST00000353909 DCLK2Q8N568 766 aa15.86■□□□□ 0.13
MBD1-205ENST00000353909 TBC1D31Q96DN5 1066 aa15.86■□□□□ 0.13
MBD1-205ENST00000353909 VAT1Q99536 393 aa15.86■□□□□ 0.13
MBD1-205ENST00000353909 NOL6Q9H6R4 1146 aaKnown RBP15.86■□□□□ 0.13
MBD1-205ENST00000353909 TXNDC16Q9P2K2 825 aa15.86■□□□□ 0.13
MBD1-205ENST00000353909 TMEM189-UBE2V1I3L0A0 370 aa15.86■□□□□ 0.13
MBD1-205ENST00000353909 ENPP3O14638 875 aa15.86■□□□□ 0.13
MBD1-205ENST00000353909 LYPLA1O75608 230 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms