RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 NDUFAF1Q9Y375 327 aa5.12□□□□□ -1.59
SKP1-202ENST00000353411 PCDHB2Q9Y5E7 798 aa5.12□□□□□ -1.59
SKP1-202ENST00000353411 KIF1AQ12756 1690 aa5.12□□□□□ -1.59
SKP1-202ENST00000353411 USP32Q8NFA0 1604 aa5.12□□□□□ -1.59
SKP1-202ENST00000353411 HS6ST1O60243 411 aa5.12□□□□□ -1.59
SKP1-202ENST00000353411 RNASEH1O60930 286 aaKnown RBP5.12□□□□□ -1.59
SKP1-202ENST00000353411 ATG7O95352 703 aa5.12□□□□□ -1.59
SKP1-202ENST00000353411 NFYCQ13952 458 aa5.12□□□□□ -1.59
SKP1-202ENST00000353411 ZNF267Q14586 743 aaPredicted RBP5.12□□□□□ -1.59
SKP1-202ENST00000353411 USP10Q14694 798 aaKnown RBP5.12□□□□□ -1.59
SKP1-202ENST00000353411 PLCL1Q15111 1095 aa5.12□□□□□ -1.59
SKP1-202ENST00000353411 PLEKHG6Q3KR16 790 aa5.12□□□□□ -1.59
SKP1-202ENST00000353411 PYDC2Q56P42 97 aa5.12□□□□□ -1.59
SKP1-202ENST00000353411 N4BP2L1Q5TBK1 243 aaPredicted RBP5.12□□□□□ -1.59
SKP1-202ENST00000353411 C11orf88Q6PI97 169 aa5.12□□□□□ -1.59
SKP1-202ENST00000353411 PLEKHG7Q6ZR37 379 aa5.12□□□□□ -1.59
SKP1-202ENST00000353411 KIFC1Q9BW19 673 aa5.12□□□□□ -1.59
SKP1-202ENST00000353411 MED28Q9H204 178 aa5.12□□□□□ -1.59
SKP1-202ENST00000353411 TTYH1Q9H313 450 aaPredicted RBP5.12□□□□□ -1.59
SKP1-202ENST00000353411 ACSS3Q9H6R3 686 aa5.12□□□□□ -1.59
SKP1-202ENST00000353411 WDR6Q9NNW5 1121 aaKnown RBP5.12□□□□□ -1.59
SKP1-202ENST00000353411 EDARQ9UNE0 448 aa5.12□□□□□ -1.59
SKP1-202ENST00000353411 ANKRD6Q9Y2G4 727 aa5.12□□□□□ -1.59
SKP1-202ENST00000353411 C12orf71A8MTZ7 269 aa5.12□□□□□ -1.59
SKP1-202ENST00000353411 SSX5O60225 188 aa5.12□□□□□ -1.59
SKP1-202ENST00000353411 VPS4BO75351 444 aa5.12□□□□□ -1.59
SKP1-202ENST00000353411 NOL4O94818 638 aa5.12□□□□□ -1.59
SKP1-202ENST00000353411 FKBP9O95302 570 aa5.12□□□□□ -1.59
SKP1-202ENST00000353411 SERPINA1P01009 418 aa5.12□□□□□ -1.59
SKP1-202ENST00000353411 MUTP22033 750 aa5.12□□□□□ -1.59
SKP1-202ENST00000353411 FXR2P51116 673 aaKnown RBP eCLIP5.12□□□□□ -1.59
SKP1-202ENST00000353411 CDH6P55285 790 aa5.12□□□□□ -1.59
SKP1-202ENST00000353411 GTF2IP78347 998 aa5.12□□□□□ -1.59
SKP1-202ENST00000353411 ZNF45Q02386 682 aa5.12□□□□□ -1.59
SKP1-202ENST00000353411 AP3B2Q13367 1082 aa5.12□□□□□ -1.59
SKP1-202ENST00000353411 LRRC24Q50LG9 513 aa5.12□□□□□ -1.59
SKP1-202ENST00000353411 LDLRAP1Q5SW96 308 aa5.12□□□□□ -1.59
SKP1-202ENST00000353411 SLFN12LQ6IEE8 588 aa5.12□□□□□ -1.59
SKP1-202ENST00000353411 TMEM270Q6UE05 265 aa5.12□□□□□ -1.59
SKP1-202ENST00000353411 USP43Q70EL4 1123 aa5.12□□□□□ -1.59
SKP1-202ENST00000353411 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.12□□□□□ -1.59
SKP1-202ENST00000353411 IP6K1Q92551 441 aa5.12□□□□□ -1.59
SKP1-202ENST00000353411 FIG4Q92562 907 aa5.12□□□□□ -1.59
SKP1-202ENST00000353411 FAM89AQ96GI7 184 aa5.12□□□□□ -1.59
SKP1-202ENST00000353411 VCPIP1Q96JH7 1222 aa5.12□□□□□ -1.59
SKP1-202ENST00000353411 CLPTM1LQ96KA5 538 aa5.12□□□□□ -1.59
SKP1-202ENST00000353411 PPM1HQ9ULR3 514 aa5.12□□□□□ -1.59
SKP1-202ENST00000353411 GRIP1Q9Y3R0 1128 aa5.12□□□□□ -1.59
SKP1-202ENST00000353411 V9GYQ6 96 aa5.12□□□□□ -1.59
SKP1-202ENST00000353411 FAM240BA0A1B0GVZ2 78 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 AURKAO14965 403 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 SYNCRIPO60506 623 aaKnown RBP5.11□□□□□ -1.59
SKP1-202ENST00000353411 VAPBO95292 243 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 ITGB3P05106 788 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 TSPAN19P0C672 248 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 RBP3P10745 1247 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 FGFR2P21802 821 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 GLDCP23378 1020 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 RPL14P50914 215 aaKnown RBP5.11□□□□□ -1.59
SKP1-202ENST00000353411 NIPAL4Q0D2K0 466 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 C2CD6Q53TS8 623 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 ARSHQ5FYA8 562 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 GLRA4Q5JXX5 417 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 SLC27A3Q5K4L6 730 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 POTEGQ6S5H5 508 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 RYBPQ8N488 228 aaPredicted RBP5.11□□□□□ -1.59
SKP1-202ENST00000353411 LSM14AQ8ND56 463 aaKnown RBP5.11□□□□□ -1.59
SKP1-202ENST00000353411 FCGR1BQ92637 280 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 TOP1MTQ969P6 601 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 FAM20AQ96MK3 541 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 HERC2P3Q9BVR0 1158 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 PIGUQ9H490 435 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 XKR8Q9H6D3 395 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 CUEDC1Q9NWM3 386 aaPredicted RBP5.11□□□□□ -1.59
SKP1-202ENST00000353411 GPN3Q9UHW5 284 aaPredicted RBP5.11□□□□□ -1.59
SKP1-202ENST00000353411 SLC13A4Q9UKG4 626 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 MAP2P11137 1827 aaKnown RBP5.11□□□□□ -1.59
SKP1-202ENST00000353411 TBX1O43435 398 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 PDK1Q15118 436 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 CARTPTQ16568 116 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 C16orf46Q6P387 395 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 COLGALT2Q8IYK4 626 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 ZNF540Q8NDQ6 660 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 TADA1Q96BN2 335 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 ARL5BQ96KC2 179 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 DMRTB1Q96MA1 342 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 NEUROG2Q9H2A3 272 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 QTRT2Q9H974 415 aaKnown RBP5.11□□□□□ -1.59
SKP1-202ENST00000353411 H0YGN5 161 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 IL7P13232 177 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 ADORA1P30542 326 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 IL18R1Q13478 541 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 OGFOD2Q6N063 350 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 SLC22A9Q8IVM8 553 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 RNF148Q8N7C7 305 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 SEMA6BQ9H3T3 888 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 FAM105AQ9NUU6 356 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 NFS1Q9Y697 457 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 J3QRK9 145 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 EIF3FO00303 357 aaPredicted RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms