RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 ITGAVP06756 1048 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 MYZAPP0CAP1 466 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 ATF2P15336 505 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 TCF4P15884 667 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 DESP17661 470 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 ITPKAP23677 461 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 PAX3P23760 479 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 SSR1P43307 286 aaKnown RBP8.5□□□□□ -1.05
CD44-205ENST00000352818 ACADSBP45954 432 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 KCNJ1P48048 391 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 DGKEP52429 567 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 PMS2P54278 862 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 PLTPP55058 493 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 RIPPLY3P57055 190 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 ZNF844Q08AG5 666 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 BST2Q10589 180 aaKnown RBP8.5□□□□□ -1.05
CD44-205ENST00000352818 ORC1Q13415 861 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 OASLQ15646 514 aaKnown RBP8.5□□□□□ -1.05
CD44-205ENST00000352818 PPP1R26Q5T8A7 1209 aaPredicted RBP8.5□□□□□ -1.05
CD44-205ENST00000352818 FAM102AQ5T9C2 384 aaPredicted RBP8.5□□□□□ -1.05
CD44-205ENST00000352818 FAM171A1Q5VUB5 890 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 BBS12Q6ZW61 710 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 TRMT10CQ7L0Y3 403 aaKnown RBP8.5□□□□□ -1.05
CD44-205ENST00000352818 SYT13Q7L8C5 426 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 ANKS1BQ7Z6G8 1248 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 HOOK3Q86VS8 718 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 TTC30AQ86WT1 665 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 RELL1Q8IUW5 271 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 NAXDQ8IW45 347 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 ARFGAP1Q8N6T3 406 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 HASPINQ8TF76 798 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 SLC35F5Q8WV83 523 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 UBLCP1Q8WVY7 318 aaPredicted RBP8.5□□□□□ -1.05
CD44-205ENST00000352818 KBTBD7Q8WVZ9 684 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 TEKT4Q8WW24 435 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 ATG4AQ8WYN0 398 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 WBP1Q96G27 269 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 TNIP3Q96KP6 325 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 HSFY1Q96LI6 401 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 PHACTR1Q9C0D0 580 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 CXCL16Q9H2A7 254 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 EPB41L4BQ9H329 900 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 GIT1Q9Y2X7 761 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 HES2Q9Y543 173 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 NME7Q9Y5B8 376 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 A8MXQ7 604 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 E5RJQ4 531 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 PTGESO14684 152 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 TERTO14746 1132 aaKnown RBP8.49□□□□□ -1.05
CD44-205ENST00000352818 TP73O15350 636 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 TRUB2O95900 331 aaKnown RBP8.49□□□□□ -1.05
CD44-205ENST00000352818 ATXN1LP0C7T5 689 aaKnown RBP8.49□□□□□ -1.05
CD44-205ENST00000352818 KDELR1P24390 212 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 AKAP5P24588 427 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 IL1R2P27930 398 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 MIPP30301 263 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 GJC1P36383 396 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 PI4KAP42356 2102 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 PTPN9P43378 593 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 LMAN1P49257 510 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 EPHA5P54756 1037 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 GYS2P54840 703 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 SLC6A3Q01959 620 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 TLE3Q04726 772 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 SOX4Q06945 474 aaPredicted RBP8.49□□□□□ -1.05
CD44-205ENST00000352818 DMC1Q14565 340 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 TEAD2Q15562 447 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 TAF1BQ53T94 588 aaPredicted RBP8.49□□□□□ -1.05
CD44-205ENST00000352818 ODF2Q5BJF6 829 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 GLRA4Q5JXX5 417 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 CEP85LQ5SZL2 805 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 STXBP5Q5T5C0 1151 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 DENND2CQ68D51 928 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 TXNRD3NBQ6F5E7 133 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 OR6B2Q6IFH4 312 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 FAM183BPQ6ZVS7 135 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 ZNF771Q7L3S4 317 aaPredicted RBP8.49□□□□□ -1.05
CD44-205ENST00000352818 RTL10Q7L3V2 364 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 SLC26A9Q7LBE3 791 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 ACOT1Q86TX2 421 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 RASSF3Q86WH2 238 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 ARFGAP2Q8N6H7 521 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 ALLCQ8N6M5 410 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 PDCD7Q8N8D1 485 aaKnown RBP8.49□□□□□ -1.05
CD44-205ENST00000352818 ANKRD52Q8NB46 1076 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 APPL2Q8NEU8 664 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 OR6B3Q8NGW1 331 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 SLC35B2Q8TB61 432 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 SHKBP1Q8TBC3 707 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 RAPGEF5Q92565 580 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 RNF25Q96BH1 459 aaPredicted RBP8.49□□□□□ -1.05
CD44-205ENST00000352818 ARL8AQ96BM9 186 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 TBCBQ99426 244 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 HEMGNQ9BXL5 484 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 SNX25Q9H3E2 840 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 PCDH9Q9HC56 1237 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 MTRRQ9UBK8 725 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 ASIC3Q9UHC3 531 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 PCOLCE2Q9UKZ9 415 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms