RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 ZWILCHQ9H900 591 aa14.21□□□□□ -0.13
TPM4-202ENST00000344824 PIGVQ9NUD9 493 aa14.21□□□□□ -0.13
TPM4-202ENST00000344824 ELOVL2Q9NXB9 296 aa14.21□□□□□ -0.13
TPM4-202ENST00000344824 EBF1Q9UH73 591 aa14.21□□□□□ -0.13
TPM4-202ENST00000344824 PCSK1NQ9UHG2 260 aa14.21□□□□□ -0.13
TPM4-202ENST00000344824 LCMT1Q9UIC8 334 aa14.21□□□□□ -0.13
TPM4-202ENST00000344824 JRKLQ9Y4A0 524 aa14.21□□□□□ -0.13
TPM4-202ENST00000344824 STON1Q9Y6Q2 735 aa14.21□□□□□ -0.13
TPM4-202ENST00000344824 GON4LQ3T8J9 2241 aa14.2□□□□□ -0.14
TPM4-202ENST00000344824 LRCH4O75427 683 aa14.2□□□□□ -0.14
TPM4-202ENST00000344824 LUC7L3O95232 432 aaKnown RBP14.2□□□□□ -0.14
TPM4-202ENST00000344824 EPHX1P07099 455 aa14.2□□□□□ -0.14
TPM4-202ENST00000344824 HLA-EP13747 358 aa14.2□□□□□ -0.14
TPM4-202ENST00000344824 POLR2EP19388 210 aaKnown RBP14.2□□□□□ -0.14
TPM4-202ENST00000344824 SLC1A1P43005 524 aa14.2□□□□□ -0.14
TPM4-202ENST00000344824 PTPN9P43378 593 aa14.2□□□□□ -0.14
TPM4-202ENST00000344824 MARCKSL1P49006 195 aa14.2□□□□□ -0.14
TPM4-202ENST00000344824 SPEM2Q0P670 501 aa14.2□□□□□ -0.14
TPM4-202ENST00000344824 RPS6KA1Q15418 735 aa14.2□□□□□ -0.14
TPM4-202ENST00000344824 ELF2Q15723 593 aa14.2□□□□□ -0.14
TPM4-202ENST00000344824 SLC25A52Q3SY17 297 aa14.2□□□□□ -0.14
TPM4-202ENST00000344824 RABGAP1LQ5R372 815 aa14.2□□□□□ -0.14
TPM4-202ENST00000344824 ZFYVE27Q5T4F4 411 aa14.2□□□□□ -0.14
TPM4-202ENST00000344824 OTUD1Q5VV17 481 aaPredicted RBP14.2□□□□□ -0.14
TPM4-202ENST00000344824 MBLAC2Q68D91 279 aa14.2□□□□□ -0.14
TPM4-202ENST00000344824 ARCQ7LC44 396 aa14.2□□□□□ -0.14
TPM4-202ENST00000344824 ZNF366Q8N895 744 aa14.2□□□□□ -0.14
TPM4-202ENST00000344824 NIPA2Q8N8Q9 360 aa14.2□□□□□ -0.14
TPM4-202ENST00000344824 KIF18AQ8NI77 898 aa14.2□□□□□ -0.14
TPM4-202ENST00000344824 KRT35Q92764 455 aa14.2□□□□□ -0.14
TPM4-202ENST00000344824 NPY6RQ99463 290 aa14.2□□□□□ -0.14
TPM4-202ENST00000344824 SLC6A17Q9H1V8 727 aa14.2□□□□□ -0.14
TPM4-202ENST00000344824 KLHL11Q9NVR0 708 aa14.2□□□□□ -0.14
TPM4-202ENST00000344824 RRN3Q9NYV6 651 aa14.2□□□□□ -0.14
TPM4-202ENST00000344824 CALCOCO1Q9P1Z2 691 aa14.2□□□□□ -0.14
TPM4-202ENST00000344824 THAP10Q9P2Z0 257 aaPredicted RBP14.2□□□□□ -0.14
TPM4-202ENST00000344824 VANGL2Q9ULK5 521 aa14.2□□□□□ -0.14
TPM4-202ENST00000344824 TNRC6BQ9UPQ9 1833 aaKnown RBP14.2□□□□□ -0.14
TPM4-202ENST00000344824 GFRA2O00451 464 aa14.19□□□□□ -0.14
TPM4-202ENST00000344824 SYNCRIPO60506 623 aaKnown RBP14.19□□□□□ -0.14
TPM4-202ENST00000344824 TUBB4AP04350 444 aa14.19□□□□□ -0.14
TPM4-202ENST00000344824 GABRG2P18507 467 aa14.19□□□□□ -0.14
TPM4-202ENST00000344824 NDUFV2P19404 249 aa14.19□□□□□ -0.14
TPM4-202ENST00000344824 MIPP30301 263 aa14.19□□□□□ -0.14
TPM4-202ENST00000344824 CXCR5P32302 372 aa14.19□□□□□ -0.14
TPM4-202ENST00000344824 LMAN2Q12907 356 aa14.19□□□□□ -0.14
TPM4-202ENST00000344824 CCDC6Q16204 474 aa14.19□□□□□ -0.14
TPM4-202ENST00000344824 SMTNL2Q2TAL5 461 aa14.19□□□□□ -0.14
TPM4-202ENST00000344824 FUT11Q495W5 492 aa14.19□□□□□ -0.14
TPM4-202ENST00000344824 TMEM215Q68D42 235 aa14.19□□□□□ -0.14
TPM4-202ENST00000344824 ARFGAP1Q8N6T3 406 aa14.19□□□□□ -0.14
TPM4-202ENST00000344824 ZNF557Q8N988 423 aaPredicted RBP14.19□□□□□ -0.14
TPM4-202ENST00000344824 GABRG3Q99928 467 aa14.19□□□□□ -0.14
TPM4-202ENST00000344824 TLR10Q9BXR5 811 aa14.19□□□□□ -0.14
TPM4-202ENST00000344824 TKTL2Q9H0I9 626 aa14.19□□□□□ -0.14
TPM4-202ENST00000344824 WDCPQ9H6R7 721 aa14.19□□□□□ -0.14
TPM4-202ENST00000344824 HS3ST4Q9Y661 456 aa14.19□□□□□ -0.14
TPM4-202ENST00000344824 CEP250Q9BV73 2442 aa14.19□□□□□ -0.14
TPM4-202ENST00000344824 PI4KAP42356 2102 aa14.18□□□□□ -0.14
TPM4-202ENST00000344824 A0A1W2PQF6 199 aa14.18□□□□□ -0.14
TPM4-202ENST00000344824 DDX3YO15523 660 aaKnown RBP14.18□□□□□ -0.14
TPM4-202ENST00000344824 MAP3K13O43283 966 aa14.18□□□□□ -0.14
TPM4-202ENST00000344824 SRGAP2O75044 1071 aa14.18□□□□□ -0.14
TPM4-202ENST00000344824 PAGE1O75459 146 aa14.18□□□□□ -0.14
TPM4-202ENST00000344824 URI1O94763 535 aaPredicted RBP14.18□□□□□ -0.14
TPM4-202ENST00000344824 RETP07949 1114 aa14.18□□□□□ -0.14
TPM4-202ENST00000344824 BCKDHBP21953 392 aa14.18□□□□□ -0.14
TPM4-202ENST00000344824 PRKCHP24723 683 aa14.18□□□□□ -0.14
TPM4-202ENST00000344824 RDXP35241 583 aaKnown RBP14.18□□□□□ -0.14
TPM4-202ENST00000344824 HDAC4P56524 1084 aa14.18□□□□□ -0.14
TPM4-202ENST00000344824 ACAP1Q15027 740 aa14.18□□□□□ -0.14
TPM4-202ENST00000344824 HADHQ16836 314 aaKnown RBP14.18□□□□□ -0.14
TPM4-202ENST00000344824 PLK5Q496M5 336 aa14.18□□□□□ -0.14
TPM4-202ENST00000344824 MPP7Q5T2T1 576 aa14.18□□□□□ -0.14
TPM4-202ENST00000344824 TXNRD3NBQ6F5E7 133 aa14.18□□□□□ -0.14
TPM4-202ENST00000344824 ARMCX6Q7L4S7 300 aa14.18□□□□□ -0.14
TPM4-202ENST00000344824 FAM131BQ86XD5 332 aa14.18□□□□□ -0.14
TPM4-202ENST00000344824 RHOT1Q8IXI2 618 aa14.18□□□□□ -0.14
TPM4-202ENST00000344824 UBL4BQ8N7F7 174 aa14.18□□□□□ -0.14
TPM4-202ENST00000344824 HES6Q96HZ4 224 aa14.18□□□□□ -0.14
TPM4-202ENST00000344824 PEBP4Q96S96 227 aa14.18□□□□□ -0.14
TPM4-202ENST00000344824 TMPRSS4Q9NRS4 437 aa14.18□□□□□ -0.14
TPM4-202ENST00000344824 CYP8B1Q9UNU6 501 aa14.18□□□□□ -0.14
TPM4-202ENST00000344824 PLA2G4CQ9UP65 541 aa14.18□□□□□ -0.14
TPM4-202ENST00000344824 SNX10Q9Y5X0 201 aa14.18□□□□□ -0.14
TPM4-202ENST00000344824 MIF4GDA9UHW6 222 aaKnown RBP14.17□□□□□ -0.14
TPM4-202ENST00000344824 KCNK3O14649 394 aa14.17□□□□□ -0.14
TPM4-202ENST00000344824 NPC1O15118 1278 aa14.17□□□□□ -0.14
TPM4-202ENST00000344824 PRPSAP2O60256 369 aa14.17□□□□□ -0.14
TPM4-202ENST00000344824 F9P00740 461 aa14.17□□□□□ -0.14
TPM4-202ENST00000344824 ATP5BP06576 529 aaKnown RBP14.17□□□□□ -0.14
TPM4-202ENST00000344824 CTNNA2P26232 953 aa14.17□□□□□ -0.14
TPM4-202ENST00000344824 IL1R2P27930 398 aa14.17□□□□□ -0.14
TPM4-202ENST00000344824 CTNNA1P35221 906 aaKnown RBP14.17□□□□□ -0.14
TPM4-202ENST00000344824 CSKP41240 450 aa14.17□□□□□ -0.14
TPM4-202ENST00000344824 DHPSP49366 369 aaPredicted RBP14.17□□□□□ -0.14
TPM4-202ENST00000344824 ST8SIA6P61647 398 aa14.17□□□□□ -0.14
TPM4-202ENST00000344824 SLC25A11Q02978 314 aaKnown RBP14.17□□□□□ -0.14
TPM4-202ENST00000344824 ZNF211Q13398 564 aaPredicted RBP14.17□□□□□ -0.14
TPM4-202ENST00000344824 E2F5Q15329 346 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms