RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 LSP1P33241 339 aa13.88□□□□□ -0.19
CDC42-202ENST00000344548 IHHQ14623 411 aa13.88□□□□□ -0.19
CDC42-202ENST00000344548 FOXR1Q6PIV2 292 aa13.88□□□□□ -0.19
CDC42-202ENST00000344548 CHSY1Q86X52 802 aa13.88□□□□□ -0.19
CDC42-202ENST00000344548 UMODL1-AS1Q8N2C9 162 aa13.88□□□□□ -0.19
CDC42-202ENST00000344548 DCAKDQ8WVC6 231 aa13.88□□□□□ -0.19
CDC42-202ENST00000344548 RPRD1AQ96P16 312 aaPredicted RBP13.88□□□□□ -0.19
CDC42-202ENST00000344548 KLHL5Q96PQ7 755 aa13.88□□□□□ -0.19
CDC42-202ENST00000344548 EBNA1BP2Q99848 306 aaKnown RBP13.88□□□□□ -0.19
CDC42-202ENST00000344548 CCDC77Q9BR77 488 aa13.88□□□□□ -0.19
CDC42-202ENST00000344548 GBA3Q9H227 469 aa13.88□□□□□ -0.19
CDC42-202ENST00000344548 RXFP1Q9HBX9 757 aa13.88□□□□□ -0.19
CDC42-202ENST00000344548 TMEM248Q9NWD8 314 aa13.88□□□□□ -0.19
CDC42-202ENST00000344548 SLC17A6Q9P2U8 582 aa13.88□□□□□ -0.19
CDC42-202ENST00000344548 HSFX1Q9UBD0 423 aa13.88□□□□□ -0.19
CDC42-202ENST00000344548 IPO11Q9UI26 975 aaKnown RBP13.88□□□□□ -0.19
CDC42-202ENST00000344548 ACTL7AQ9Y615 435 aa13.88□□□□□ -0.19
CDC42-202ENST00000344548 BPTFQ12830 3046 aa13.88□□□□□ -0.19
CDC42-202ENST00000344548 TTC24A2A3L6 582 aaPredicted RBP13.88□□□□□ -0.19
CDC42-202ENST00000344548 STC2O76061 302 aa13.88□□□□□ -0.19
CDC42-202ENST00000344548 OAS1P00973 400 aaKnown RBP13.88□□□□□ -0.19
CDC42-202ENST00000344548 IRF1P10914 325 aa13.88□□□□□ -0.19
CDC42-202ENST00000344548 TACR2P21452 398 aa13.88□□□□□ -0.19
CDC42-202ENST00000344548 ACVRL1P37023 503 aa13.88□□□□□ -0.19
CDC42-202ENST00000344548 RPS24P62847 133 aaKnown RBP13.88□□□□□ -0.19
CDC42-202ENST00000344548 PPIGQ13427 754 aaKnown RBP eCLIP13.88□□□□□ -0.19
CDC42-202ENST00000344548 LRRC8BQ6P9F7 803 aa13.88□□□□□ -0.19
CDC42-202ENST00000344548 HERC6Q8IVU3 1022 aa13.88□□□□□ -0.19
CDC42-202ENST00000344548 HS6ST3Q8IZP7 471 aa13.88□□□□□ -0.19
CDC42-202ENST00000344548 PSMG2Q969U7 264 aa13.88□□□□□ -0.19
CDC42-202ENST00000344548 IL12RB2Q99665 862 aa13.88□□□□□ -0.19
CDC42-202ENST00000344548 NACA2Q9H009 215 aa13.88□□□□□ -0.19
CDC42-202ENST00000344548 BRD8Q9H0E9 1235 aa13.88□□□□□ -0.19
CDC42-202ENST00000344548 SYBUQ9NX95 663 aa13.88□□□□□ -0.19
CDC42-202ENST00000344548 TRPM5Q9NZQ8 1165 aa13.88□□□□□ -0.19
CDC42-202ENST00000344548 PPARGC1AQ9UBK2 798 aaKnown RBP13.88□□□□□ -0.19
CDC42-202ENST00000344548 INSL6Q9Y581 213 aa13.88□□□□□ -0.19
CDC42-202ENST00000344548 MATN3O15232 486 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 GJB3O75712 270 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 CXCL14O95715 111 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 F11P03951 625 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 HLA-DQB2P05538 268 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 GJA1P17302 382 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 ELF1P32519 619 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 HTR7P34969 479 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 PPM1AP35813 382 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 GEMIN4P57678 1058 aaKnown RBP13.87□□□□□ -0.19
CDC42-202ENST00000344548 LRRC14Q15048 493 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 TXNDC8Q6A555 127 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 LILRA6Q6PI73 481 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 TMC7Q7Z402 723 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 TADA2BQ86TJ2 420 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 TRABD2AQ86V40 505 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 TDRPQ86YL5 185 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 LGI2Q8N0V4 545 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 LZTR1Q8N653 840 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 ADAMTS19Q8TE59 1207 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 MZB1Q8WU39 189 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 TRMT2BQ96GJ1 504 aaKnown RBP13.87□□□□□ -0.19
CDC42-202ENST00000344548 ZFRQ96KR1 1074 aaKnown RBP13.87□□□□□ -0.19
CDC42-202ENST00000344548 PRICKLE1Q96MT3 831 aaPredicted RBP13.87□□□□□ -0.19
CDC42-202ENST00000344548 EIF2B3Q9NR50 452 aaKnown RBP13.87□□□□□ -0.19
CDC42-202ENST00000344548 FNIP2Q9P278 1114 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 PRKAG2Q9UGJ0 569 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 A0A0D9SEW6 157 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.87□□□□□ -0.19
CDC42-202ENST00000344548 TMEM120BA0PK00 339 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 RASA4BC9J798 803 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 RASA4O43374 803 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 ACSL4O60488 711 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 AP2A1O95782 977 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 CPP00450 1065 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 IVLP07476 585 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 TPH1P17752 444 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 SLC10A7Q0GE19 358 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 TAF12Q16514 161 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 CERCAMQ5T4B2 595 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 FAM109BQ6ICB4 259 aaPredicted RBP13.87□□□□□ -0.19
CDC42-202ENST00000344548 MICALCLQ6ZW33 695 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 GAREM2Q75VX8 874 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 ZNF771Q7L3S4 317 aaPredicted RBP13.87□□□□□ -0.19
CDC42-202ENST00000344548 CROCCP2Q86T23 111 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 ZNF276Q8N554 614 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 PDZD8Q8NEN9 1154 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 ATXN2LQ8WWM7 1075 aaKnown RBP13.87□□□□□ -0.19
CDC42-202ENST00000344548 OVCA2Q8WZ82 227 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 CEP295NLQ96MC4 621 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 C17orf80Q9BSJ5 609 aa13.87□□□□□ -0.19
CDC42-202ENST00000344548 KLF16Q9BXK1 252 aaPredicted RBP13.87□□□□□ -0.19
CDC42-202ENST00000344548 FRMD8Q9BZ67 464 aaPredicted RBP13.87□□□□□ -0.19
CDC42-202ENST00000344548 XAB2Q9HCS7 855 aaKnown RBP13.87□□□□□ -0.19
CDC42-202ENST00000344548 PPANQ9NQ55 473 aaKnown RBP13.87□□□□□ -0.19
CDC42-202ENST00000344548 HBS1LQ9Y450 684 aaKnown RBP13.87□□□□□ -0.19
CDC42-202ENST00000344548 C5orf42Q9H799 3197 aa13.86□□□□□ -0.19
CDC42-202ENST00000344548 GRXCR1A8MXD5 290 aa13.86□□□□□ -0.19
CDC42-202ENST00000344548 CACNG3O60359 315 aa13.86□□□□□ -0.19
CDC42-202ENST00000344548 SPAG7O75391 227 aa13.86□□□□□ -0.19
CDC42-202ENST00000344548 F7P08709 466 aaPredicted RBP13.86□□□□□ -0.19
CDC42-202ENST00000344548 BRAFP15056 766 aa13.86□□□□□ -0.19
CDC42-202ENST00000344548 CORO1AP31146 461 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms