RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 MID1IP1Q9NPA3 183 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 TUBGCP4Q9UGJ1 667 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 ANKRD6Q9Y2G4 727 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 FARP1Q9Y4F1 1045 aaPredicted RBP7.32□□□□□ -1.24
VCAN-202ENST00000342785 KANSL1LA0AUZ9 987 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 H0Y626 953 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 PSMD12O00232 456 aaPredicted RBP7.32□□□□□ -1.24
VCAN-202ENST00000342785 EGFRP00533 1210 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 PIGRP01833 764 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 FAM58BPP0C7Q3 252 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 SMIM10L2AP0DMW4 78 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 SMIM10L2BP0DMW5 78 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 OR1E1P30953 314 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 CTBP1Q13363 440 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 MSLNQ13421 630 aaPredicted RBP7.32□□□□□ -1.24
VCAN-202ENST00000342785 CDH18Q13634 790 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 ADRM1Q16186 407 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 SLC25A52Q3SY17 297 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 CXCL17Q6UXB2 119 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 C12orf42Q96LP6 360 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 SSU72Q9NP77 194 aaKnown RBP7.32□□□□□ -1.24
VCAN-202ENST00000342785 XPR1Q9UBH6 696 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 MORF4L1Q9UBU8 362 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 BCLAF3A2AJT9 711 aaKnown RBP7.31□□□□□ -1.24
VCAN-202ENST00000342785 HOXC6P09630 235 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 MLNP12872 115 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 AKR1A1P14550 325 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 CDH2P19022 906 aaPredicted RBP7.31□□□□□ -1.24
VCAN-202ENST00000342785 ATP5F1P24539 256 aaPredicted RBP7.31□□□□□ -1.24
VCAN-202ENST00000342785 RAB27AP51159 221 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 FSCN1Q16658 493 aaKnown RBP7.31□□□□□ -1.24
VCAN-202ENST00000342785 TTLL9Q3SXZ7 439 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 ATP6AP1LQ52LC2 224 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 TBCELQ5QJ74 424 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 NET1Q7Z628 596 aaPredicted RBP7.31□□□□□ -1.24
VCAN-202ENST00000342785 C10orf107Q8IVU9 208 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.31□□□□□ -1.24
VCAN-202ENST00000342785 ELMOD1Q8N336 334 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 GSTCDQ8NEC7 633 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 FIZ1Q96SL8 496 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 DUSP16Q9BY84 665 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 FBXO44Q9H4M3 255 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 PDZD7Q9H5P4 517 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 PTPRHQ9HD43 1115 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 PCDHB5Q9Y5E4 795 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 EVPLLA8MZ36 301 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 MYO1GB0I1T2 1018 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 CABYRO75952 493 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 RHOCP08134 193 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 CCNB1P14635 433 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 DDX39BQ13838 428 aaKnown RBP7.31□□□□□ -1.24
VCAN-202ENST00000342785 ZFP1Q6P2D0 407 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 DHFR2Q86XF0 187 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 FBXO39Q8N4B4 442 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 RIN3Q8TB24 985 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 C7orf26Q96N11 449 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 PRPF18Q99633 342 aaKnown RBP7.31□□□□□ -1.24
VCAN-202ENST00000342785 C17orf80Q9BSJ5 609 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 GPBP1L1Q9HC44 474 aaPredicted RBP7.31□□□□□ -1.24
VCAN-202ENST00000342785 CNGB3Q9NQW8 809 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 TAS2R1Q9NYW7 299 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 TRPM5Q9NZQ8 1165 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 CRYL1Q9Y2S2 319 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 CLUHO75153 1309 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 MDM4O15151 490 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 GRIN3BO60391 1043 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 RPLP2P05387 115 aaKnown RBP7.31□□□□□ -1.24
VCAN-202ENST00000342785 DARSP14868 501 aaKnown RBP7.31□□□□□ -1.24
VCAN-202ENST00000342785 TPSB2P20231 275 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 IL1R2P27930 398 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 GRIA4P48058 902 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 TPSAB1Q15661 275 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 DUSP28Q4G0W2 176 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 BANPQ8N9N5 519 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 RNF217Q8TC41 542 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 DIS3LQ8TF46 1054 aaKnown RBP7.31□□□□□ -1.24
VCAN-202ENST00000342785 FAM162AQ96A26 154 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 ADAM2Q99965 735 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 CLPBQ9H078 707 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 TAS2R13Q9NYV9 303 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 RAP2CQ9Y3L5 183 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 TOPAZ1Q8N9V7 1692 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 SPDYE5A6NIY4 337 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 SPTLC1O15269 473 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 TGDSO95455 350 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 CCDC166P0CW27 439 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 ANPEPP15144 967 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 HOXB8P17481 243 aaPredicted RBP7.31□□□□□ -1.24
VCAN-202ENST00000342785 PTPN9P43378 593 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 ALDH1A3P47895 512 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 ALDH7A1P49419 539 aaKnown RBP7.31□□□□□ -1.24
VCAN-202ENST00000342785 SERPINH1P50454 418 aaKnown RBP7.31□□□□□ -1.24
VCAN-202ENST00000342785 SAMD4BQ5PRF9 694 aaKnown RBP7.31□□□□□ -1.24
VCAN-202ENST00000342785 CERCAMQ5T4B2 595 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 TRMT10BQ6PF06 316 aaKnown RBP7.31□□□□□ -1.24
VCAN-202ENST00000342785 C6orf89Q6UWU4 347 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 DHDDSQ86SQ9 333 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 FAM35AQ86V20 835 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 LPCAT1Q8NF37 534 aa7.31□□□□□ -1.24
VCAN-202ENST00000342785 CMASQ8NFW8 434 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms