RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 ERP27Q96DN0 273 aa13.37□□□□□ -0.27
COL18A1-201ENST00000342220 FERMT1Q9BQL6 677 aa13.37□□□□□ -0.27
COL18A1-201ENST00000342220 A0A0C4DFX4 3053 aa13.37□□□□□ -0.27
COL18A1-201ENST00000342220 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.37□□□□□ -0.27
COL18A1-201ENST00000342220 MTMR11A4FU01 709 aa13.37□□□□□ -0.27
COL18A1-201ENST00000342220 RNF103O00237 685 aa13.37□□□□□ -0.27
COL18A1-201ENST00000342220 PITPNM1O00562 1244 aa13.37□□□□□ -0.27
COL18A1-201ENST00000342220 PMPCBO75439 489 aa13.37□□□□□ -0.27
COL18A1-201ENST00000342220 UNC5CO95185 931 aa13.37□□□□□ -0.27
COL18A1-201ENST00000342220 CCNB1P14635 433 aa13.37□□□□□ -0.27
COL18A1-201ENST00000342220 CA4P22748 312 aa13.37□□□□□ -0.27
COL18A1-201ENST00000342220 ALDH1A3P47895 512 aa13.37□□□□□ -0.27
COL18A1-201ENST00000342220 DSC1Q08554 894 aa13.37□□□□□ -0.27
COL18A1-201ENST00000342220 SEPT7Q16181 437 aaKnown RBP13.37□□□□□ -0.27
COL18A1-201ENST00000342220 USP41Q3LFD5 358 aa13.37□□□□□ -0.27
COL18A1-201ENST00000342220 MSS51Q4VC12 460 aa13.37□□□□□ -0.27
COL18A1-201ENST00000342220 FBXO46Q6PJ61 603 aaPredicted RBP13.37□□□□□ -0.27
COL18A1-201ENST00000342220 ARHGAP36Q6ZRI8 547 aa13.37□□□□□ -0.27
COL18A1-201ENST00000342220 CYP4V2Q6ZWL3 525 aaPredicted RBP13.37□□□□□ -0.27
COL18A1-201ENST00000342220 ZNF558Q96NG5 402 aa13.37□□□□□ -0.27
COL18A1-201ENST00000342220 TMEM237Q96Q45 408 aa13.37□□□□□ -0.27
COL18A1-201ENST00000342220 NPY6RQ99463 290 aa13.37□□□□□ -0.27
COL18A1-201ENST00000342220 FOXP3Q9BZS1 431 aa13.37□□□□□ -0.27
COL18A1-201ENST00000342220 GALNT8Q9NY28 637 aa13.37□□□□□ -0.27
COL18A1-201ENST00000342220 DLGAP2Q9P1A6 1054 aa13.37□□□□□ -0.27
COL18A1-201ENST00000342220 WDR27A2RRH5 827 aa13.36□□□□□ -0.27
COL18A1-201ENST00000342220 ZNF189O75820 626 aaPredicted RBP13.36□□□□□ -0.27
COL18A1-201ENST00000342220 METTL18O95568 372 aa13.36□□□□□ -0.27
COL18A1-201ENST00000342220 VSIG1Q86XK7 387 aa13.36□□□□□ -0.27
COL18A1-201ENST00000342220 TEX9Q8N6V9 391 aa13.36□□□□□ -0.27
COL18A1-201ENST00000342220 FBF1Q8TES7 1133 aa13.36□□□□□ -0.27
COL18A1-201ENST00000342220 UTP4Q969X6 686 aaKnown RBP13.36□□□□□ -0.27
COL18A1-201ENST00000342220 KLHL5Q96PQ7 755 aa13.36□□□□□ -0.27
COL18A1-201ENST00000342220 SMC6Q96SB8 1091 aa13.36□□□□□ -0.27
COL18A1-201ENST00000342220 KLC2Q9H0B6 622 aa13.36□□□□□ -0.27
COL18A1-201ENST00000342220 PREBQ9HCU5 417 aa13.36□□□□□ -0.27
COL18A1-201ENST00000342220 RHBDL2Q9NX52 303 aa13.36□□□□□ -0.27
COL18A1-201ENST00000342220 FZD10Q9ULW2 581 aa13.36□□□□□ -0.27
COL18A1-201ENST00000342220 CHKBQ9Y259 395 aa13.36□□□□□ -0.27
COL18A1-201ENST00000342220 GRXCR1A8MXD5 290 aa13.36□□□□□ -0.27
COL18A1-201ENST00000342220 M0QZQ0 153 aa13.36□□□□□ -0.27
COL18A1-201ENST00000342220 STK10O94804 968 aaKnown RBP13.36□□□□□ -0.27
COL18A1-201ENST00000342220 TARSP26639 723 aaKnown RBP13.36□□□□□ -0.27
COL18A1-201ENST00000342220 PSMB4P28070 264 aa13.36□□□□□ -0.27
COL18A1-201ENST00000342220 CCR1P32246 355 aa13.36□□□□□ -0.27
COL18A1-201ENST00000342220 ELK3P41970 407 aa13.36□□□□□ -0.27
COL18A1-201ENST00000342220 PTPN9P43378 593 aa13.36□□□□□ -0.27
COL18A1-201ENST00000342220 ARL4CP56559 192 aa13.36□□□□□ -0.27
COL18A1-201ENST00000342220 TBX4P57082 545 aa13.36□□□□□ -0.27
COL18A1-201ENST00000342220 OASLQ15646 514 aaKnown RBP13.36□□□□□ -0.27
COL18A1-201ENST00000342220 RNASEH2BQ5TBB1 312 aaKnown RBP13.36□□□□□ -0.27
COL18A1-201ENST00000342220 PLPP4Q5VZY2 271 aa13.36□□□□□ -0.27
COL18A1-201ENST00000342220 C14orf80Q86SX3 495 aa13.36□□□□□ -0.27
COL18A1-201ENST00000342220 COLGALT1Q8NBJ5 622 aa13.36□□□□□ -0.27
COL18A1-201ENST00000342220 SLC35B2Q8TB61 432 aa13.36□□□□□ -0.27
COL18A1-201ENST00000342220 CPT1BQ92523 772 aa13.36□□□□□ -0.27
COL18A1-201ENST00000342220 TTC25Q96NG3 672 aa13.36□□□□□ -0.27
COL18A1-201ENST00000342220 MRPL9Q9BYD2 267 aaKnown RBP13.36□□□□□ -0.27
COL18A1-201ENST00000342220 NDFIP2Q9NV92 336 aa13.36□□□□□ -0.27
COL18A1-201ENST00000342220 SAGE1Q9NXZ1 904 aa13.36□□□□□ -0.27
COL18A1-201ENST00000342220 hCG_2014768A0A024R1R8 64 aa13.35□□□□□ -0.27
COL18A1-201ENST00000342220 PRPF4O43172 522 aaKnown RBP eCLIP13.35□□□□□ -0.271e-7■■■□□ 19.2
COL18A1-201ENST00000342220 APOEP02649 317 aa13.35□□□□□ -0.27
COL18A1-201ENST00000342220 NOMO1Q15155 1222 aa13.35□□□□□ -0.27
COL18A1-201ENST00000342220 MIPOL1Q8TD10 442 aa13.35□□□□□ -0.27
COL18A1-201ENST00000342220 PDCD6IPQ8WUM4 868 aaKnown RBP13.35□□□□□ -0.27
COL18A1-201ENST00000342220 P2RY11Q96G91 374 aa13.35□□□□□ -0.27
COL18A1-201ENST00000342220 ZNF333Q96JL9 665 aa13.35□□□□□ -0.27
COL18A1-201ENST00000342220 ENTPD7Q9NQZ7 604 aa13.35□□□□□ -0.27
COL18A1-201ENST00000342220 MTMR10Q9NXD2 777 aa13.35□□□□□ -0.27
COL18A1-201ENST00000342220 HAO1Q9UJM8 370 aa13.35□□□□□ -0.27
COL18A1-201ENST00000342220 STARD13Q9Y3M8 1113 aa13.35□□□□□ -0.27
COL18A1-201ENST00000342220 TRIOBPQ9H2D6 2365 aa13.35□□□□□ -0.27
COL18A1-201ENST00000342220 PER2O15055 1255 aa13.35□□□□□ -0.27
COL18A1-201ENST00000342220 HOXA2O43364 376 aa13.35□□□□□ -0.27
COL18A1-201ENST00000342220 NR1H3Q13133 447 aa13.35□□□□□ -0.27
COL18A1-201ENST00000342220 MORF4L2Q15014 288 aa13.35□□□□□ -0.27
COL18A1-201ENST00000342220 ACAP1Q15027 740 aa13.35□□□□□ -0.27
COL18A1-201ENST00000342220 RASIP1Q5U651 963 aa13.35□□□□□ -0.27
COL18A1-201ENST00000342220 NCBP2-AS2Q69YL0 99 aa13.35□□□□□ -0.27
COL18A1-201ENST00000342220 DRICH1Q6PGQ1 229 aaPredicted RBP13.35□□□□□ -0.27
COL18A1-201ENST00000342220 CEP128Q6ZU80 1094 aa13.35□□□□□ -0.27
COL18A1-201ENST00000342220 STRADAQ7RTN6 431 aa13.35□□□□□ -0.27
COL18A1-201ENST00000342220 SCD5Q86SK9 330 aa13.35□□□□□ -0.27
COL18A1-201ENST00000342220 TDRPQ86YL5 185 aa13.35□□□□□ -0.27
COL18A1-201ENST00000342220 DENND1CQ8IV53 801 aa13.35□□□□□ -0.27
COL18A1-201ENST00000342220 LRRC8CQ8TDW0 803 aa13.35□□□□□ -0.27
COL18A1-201ENST00000342220 HTR3CQ8WXA8 447 aa13.35□□□□□ -0.27
COL18A1-201ENST00000342220 EXOC2Q96KP1 924 aa13.35□□□□□ -0.27
COL18A1-201ENST00000342220 C12orf65Q9H3J6 166 aaKnown RBP13.35□□□□□ -0.27
COL18A1-201ENST00000342220 PCDH9Q9HC56 1237 aa13.35□□□□□ -0.27
COL18A1-201ENST00000342220 ANK1P16157 1881 aa13.35□□□□□ -0.27
COL18A1-201ENST00000342220 ALOX15BO15296 676 aa13.35□□□□□ -0.27
COL18A1-201ENST00000342220 MYOGP15173 224 aa13.35□□□□□ -0.27
COL18A1-201ENST00000342220 CCDC15Q0P6D6 951 aa13.35□□□□□ -0.27
COL18A1-201ENST00000342220 MPP3Q13368 585 aa13.35□□□□□ -0.27
COL18A1-201ENST00000342220 DYNC1I2Q13409 638 aaKnown RBP13.35□□□□□ -0.27
COL18A1-201ENST00000342220 SEPT6Q14141 434 aa13.35□□□□□ -0.27
COL18A1-201ENST00000342220 SETDB1Q15047 1291 aa13.35□□□□□ -0.27
COL18A1-201ENST00000342220 FAM171BQ6P995 826 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms