RNA–Protein interactions for RNA: ENST00000341753.10

TRIM28-202, Transcript of tripartite motif containing 28, humanhuman

TSL 1 (best) BASIC

Gene TRIM28, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-202ENST00000341753 DMTF1Q9Y222 760 aa22.85■■□□□ 1.25
TRIM28-202ENST00000341753 EVPLQ92817 2033 aa22.85■■□□□ 1.25
TRIM28-202ENST00000341753 RNF103O00237 685 aa22.84■■□□□ 1.25
TRIM28-202ENST00000341753 PTPN1P18031 435 aaKnown RBP22.84■■□□□ 1.25
TRIM28-202ENST00000341753 LRRC8BQ6P9F7 803 aa22.84■■□□□ 1.25
TRIM28-202ENST00000341753 TMA16Q96EY4 203 aaKnown RBP22.84■■□□□ 1.25
TRIM28-202ENST00000341753 CERS2Q96G23 380 aa22.84■■□□□ 1.25
TRIM28-202ENST00000341753 CPB2Q96IY4 423 aa22.84■■□□□ 1.25
TRIM28-202ENST00000341753 ZFRQ96KR1 1074 aaKnown RBP22.84■■□□□ 1.25
TRIM28-202ENST00000341753 DNAH12Q6ZR08 3092 aa22.84■■□□□ 1.25
TRIM28-202ENST00000341753 A0A096LPK6 155 aa22.84■■□□□ 1.25
TRIM28-202ENST00000341753 A0A0G2JLL6 359 aaPredicted RBP22.84■■□□□ 1.25
TRIM28-202ENST00000341753 JUNP05412 331 aaKnown RBP22.84■■□□□ 1.25
TRIM28-202ENST00000341753 ITGA7Q13683 1181 aa22.84■■□□□ 1.25
TRIM28-202ENST00000341753 PIGGQ5H8A4 983 aa22.84■■□□□ 1.25
TRIM28-202ENST00000341753 FSTL4Q6MZW2 842 aa22.84■■□□□ 1.25
TRIM28-202ENST00000341753 C16orf89Q6UX73 402 aa22.84■■□□□ 1.25
TRIM28-202ENST00000341753 PRRT2Q7Z6L0 340 aaPredicted RBP22.84■■□□□ 1.25
TRIM28-202ENST00000341753 TRIM74Q86UV6 250 aa22.84■■□□□ 1.25
TRIM28-202ENST00000341753 TRIM73Q86UV7 250 aa22.84■■□□□ 1.25
TRIM28-202ENST00000341753 TP53INP2Q8IXH6 220 aa22.84■■□□□ 1.25
TRIM28-202ENST00000341753 AHI1Q8N157 1196 aa22.84■■□□□ 1.25
TRIM28-202ENST00000341753 CCNYQ8ND76 341 aa22.84■■□□□ 1.25
TRIM28-202ENST00000341753 GRIN3AQ8TCU5 1115 aa22.84■■□□□ 1.25
TRIM28-202ENST00000341753 TMIGD2Q96BF3 282 aa22.84■■□□□ 1.25
TRIM28-202ENST00000341753 ZNF512Q96ME7 567 aaPredicted RBP22.84■■□□□ 1.25
TRIM28-202ENST00000341753 TBCBQ99426 244 aa22.84■■□□□ 1.25
TRIM28-202ENST00000341753 MORF4L1Q9UBU8 362 aa22.84■■□□□ 1.25
TRIM28-202ENST00000341753 RGSL1A5PLK6 1076 aa22.83■■□□□ 1.25
TRIM28-202ENST00000341753 GOLGA8TH3BQL2 631 aa22.83■■□□□ 1.25
TRIM28-202ENST00000341753 STRNO43815 780 aa22.83■■□□□ 1.25
TRIM28-202ENST00000341753 MFSD11O43934 449 aa22.83■■□□□ 1.25
TRIM28-202ENST00000341753 TXNP10599 105 aaKnown RBP22.83■■□□□ 1.25
TRIM28-202ENST00000341753 FGFR3P22607 806 aa22.83■■□□□ 1.25
TRIM28-202ENST00000341753 COG7P83436 770 aa22.83■■□□□ 1.25
TRIM28-202ENST00000341753 CYLC2Q14093 348 aaPredicted RBP22.83■■□□□ 1.25
TRIM28-202ENST00000341753 MXD4Q14582 209 aaPredicted RBP22.83■■□□□ 1.25
TRIM28-202ENST00000341753 INSCQ1MX18 579 aa22.83■■□□□ 1.25
TRIM28-202ENST00000341753 C4orf22Q6V702 233 aa22.83■■□□□ 1.25
TRIM28-202ENST00000341753 CYS1Q717R9 158 aa22.83■■□□□ 1.25
TRIM28-202ENST00000341753 PPP1R13LQ8WUF5 828 aa22.83■■□□□ 1.25
TRIM28-202ENST00000341753 SNRNP27Q8WVK2 155 aaKnown RBP22.83■■□□□ 1.25
TRIM28-202ENST00000341753 ZNF669Q96BR6 464 aaPredicted RBP22.83■■□□□ 1.25
TRIM28-202ENST00000341753 SLC4A5Q9BY07 1137 aa22.83■■□□□ 1.25
TRIM28-202ENST00000341753 ZNF696Q9H7X3 374 aa22.83■■□□□ 1.25
TRIM28-202ENST00000341753 CCDC78A2IDD5 438 aa22.83■■□□□ 1.24
TRIM28-202ENST00000341753 DPYSL4O14531 572 aa22.83■■□□□ 1.24
TRIM28-202ENST00000341753 HCRTO43612 131 aa22.83■■□□□ 1.24
TRIM28-202ENST00000341753 TGFB3P10600 412 aa22.83■■□□□ 1.24
TRIM28-202ENST00000341753 TICAM1Q8IUC6 712 aa22.83■■□□□ 1.24
TRIM28-202ENST00000341753 OR52K1Q8NGK4 314 aa22.83■■□□□ 1.24
TRIM28-202ENST00000341753 FAM210AQ96ND0 272 aa22.83■■□□□ 1.24
TRIM28-202ENST00000341753 NPAS2Q99743 824 aa22.83■■□□□ 1.24
TRIM28-202ENST00000341753 SYNJ2BP-COX16A0A087WUM0 186 aa22.82■■□□□ 1.24
TRIM28-202ENST00000341753 GARSP41250 739 aaKnown RBP22.82■■□□□ 1.24
TRIM28-202ENST00000341753 CCDC153Q494R4 210 aa22.82■■□□□ 1.24
TRIM28-202ENST00000341753 SH2D4BQ5SQS7 431 aa22.82■■□□□ 1.24
TRIM28-202ENST00000341753 NT5C1AQ9BXI3 368 aa22.82■■□□□ 1.24
TRIM28-202ENST00000341753 WDR41Q9HAD4 459 aa22.82■■□□□ 1.24
TRIM28-202ENST00000341753 COX16Q9P0S2 106 aa22.82■■□□□ 1.24
TRIM28-202ENST00000341753 PRPF19Q9UMS4 504 aaKnown RBP22.82■■□□□ 1.24
TRIM28-202ENST00000341753 LOC285556D6RIA3 1793 aa22.82■■□□□ 1.24
TRIM28-202ENST00000341753 TK2O00142 265 aa22.82■■□□□ 1.24
TRIM28-202ENST00000341753 RNASEH2AO75792 299 aaKnown RBP22.82■■□□□ 1.24
TRIM28-202ENST00000341753 CSPG5O95196 566 aa22.82■■□□□ 1.24
TRIM28-202ENST00000341753 IL18RAPO95256 599 aa22.82■■□□□ 1.24
TRIM28-202ENST00000341753 GLRBP48167 497 aa22.82■■□□□ 1.24
TRIM28-202ENST00000341753 DPYSL2Q16555 572 aa22.82■■□□□ 1.24
TRIM28-202ENST00000341753 ZNF410Q86VK4 478 aa22.82■■□□□ 1.24
TRIM28-202ENST00000341753 GAB3Q8WWW8 586 aa22.82■■□□□ 1.24
TRIM28-202ENST00000341753 P2RY11Q96G91 374 aa22.82■■□□□ 1.24
TRIM28-202ENST00000341753 XPO1O14980 1071 aaKnown RBP22.81■■□□□ 1.24
TRIM28-202ENST00000341753 TRIM13O60858 407 aa22.81■■□□□ 1.24
TRIM28-202ENST00000341753 POLBP06746 335 aa22.81■■□□□ 1.24
TRIM28-202ENST00000341753 APOFQ13790 326 aa22.81■■□□□ 1.24
TRIM28-202ENST00000341753 KCTD2Q14681 263 aa22.81■■□□□ 1.24
TRIM28-202ENST00000341753 HSP90AA5PQ58FG0 334 aa22.81■■□□□ 1.24
TRIM28-202ENST00000341753 FAM131BQ86XD5 332 aa22.81■■□□□ 1.24
TRIM28-202ENST00000341753 FZD8Q9H461 694 aa22.81■■□□□ 1.24
TRIM28-202ENST00000341753 SNX9Q9Y5X1 595 aa22.81■■□□□ 1.24
TRIM28-202ENST00000341753 ANK1P16157 1881 aa22.81■■□□□ 1.24
TRIM28-202ENST00000341753 CYP2C8P10632 490 aa22.81■■□□□ 1.24
TRIM28-202ENST00000341753 ADARP55265 1226 aaKnown RBP22.81■■□□□ 1.24
TRIM28-202ENST00000341753 C7orf31Q8N865 590 aa22.81■■□□□ 1.24
TRIM28-202ENST00000341753 RBBP8Q99708 897 aa22.81■■□□□ 1.24
TRIM28-202ENST00000341753 UNKQ9C0B0 810 aaKnown RBP22.81■■□□□ 1.24
TRIM28-202ENST00000341753 ILKAPQ9H0C8 392 aaPredicted RBP22.81■■□□□ 1.24
TRIM28-202ENST00000341753 CYP3A43Q9HB55 503 aa22.81■■□□□ 1.24
TRIM28-202ENST00000341753 OTOFQ9HC10 1997 aa22.81■■□□□ 1.24
TRIM28-202ENST00000341753 IGKV6-21A0A0C4DH24 114 aa22.81■■□□□ 1.24
TRIM28-202ENST00000341753 TRMUO75648 421 aaKnown RBP22.81■■□□□ 1.24
TRIM28-202ENST00000341753 LCP1P13796 627 aa22.81■■□□□ 1.24
TRIM28-202ENST00000341753 SERPINB8P50452 374 aa22.81■■□□□ 1.24
TRIM28-202ENST00000341753 MBTD1Q05BQ5 628 aa22.81■■□□□ 1.24
TRIM28-202ENST00000341753 SOWAHAQ2M3V2 549 aa22.81■■□□□ 1.24
TRIM28-202ENST00000341753 KLC3Q6P597 504 aa22.81■■□□□ 1.24
TRIM28-202ENST00000341753 ADCY4Q8NFM4 1077 aa22.81■■□□□ 1.24
TRIM28-202ENST00000341753 ATP6V1E2Q96A05 226 aa22.81■■□□□ 1.24
TRIM28-202ENST00000341753 FAM167AQ96KS9 214 aa22.81■■□□□ 1.24
TRIM28-202ENST00000341753 MRPL45Q9BRJ2 306 aaKnown RBP22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms