RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 PCDH9Q9HC56 1237 aa14.89□□□□□ -0.03
NIPAL3-202ENST00000339255 C5orf42Q9H799 3197 aa14.88□□□□□ -0.03
NIPAL3-202ENST00000339255 GRXCR2A6NFK2 248 aa14.88□□□□□ -0.03
NIPAL3-202ENST00000339255 CTIFO43310 598 aaKnown RBP14.88□□□□□ -0.03
NIPAL3-202ENST00000339255 TUBBP07437 444 aa14.88□□□□□ -0.03
NIPAL3-202ENST00000339255 TERF1P54274 439 aa14.88□□□□□ -0.03
NIPAL3-202ENST00000339255 AP1B1Q10567 949 aa14.88□□□□□ -0.03
NIPAL3-202ENST00000339255 PTK6Q13882 451 aa14.88□□□□□ -0.03
NIPAL3-202ENST00000339255 ANO4Q32M45 955 aa14.88□□□□□ -0.03
NIPAL3-202ENST00000339255 CXorf57Q6NSI4 855 aaKnown RBP14.88□□□□□ -0.03
NIPAL3-202ENST00000339255 VITQ6UXI7 678 aa14.88□□□□□ -0.03
NIPAL3-202ENST00000339255 YAF2Q8IY57 180 aa14.88□□□□□ -0.03
NIPAL3-202ENST00000339255 CARNMT1Q8N4J0 409 aa14.88□□□□□ -0.03
NIPAL3-202ENST00000339255 GPR161Q8N6U8 529 aaKnown RBP14.88□□□□□ -0.03
NIPAL3-202ENST00000339255 FIBINQ8TAL6 211 aa14.88□□□□□ -0.03
NIPAL3-202ENST00000339255 USP29Q9HBJ7 922 aa14.88□□□□□ -0.03
NIPAL3-202ENST00000339255 HPCAL4Q9UM19 191 aa14.88□□□□□ -0.03
NIPAL3-202ENST00000339255 FAM50BQ9Y247 325 aa14.88□□□□□ -0.03
NIPAL3-202ENST00000339255 KIAA1549LQ6ZVL6 1849 aa14.88□□□□□ -0.03
NIPAL3-202ENST00000339255 KCNN4O15554 427 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 HOXC11O43248 304 aaPredicted RBP14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 MBTPS2O43462 519 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 HEXIM1O94992 359 aaKnown RBP14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 PAPOLAP51003 745 aaKnown RBP14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 SERINC3Q13530 473 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 SLC12A1Q13621 1099 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 PUS10Q3MIT2 529 aaKnown RBP14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 LY6G5CQ5SRR4 150 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 TMEM25Q86YD3 366 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 CCDC13Q8IYE1 715 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 FAM71DQ8N9W8 422 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 HMCESQ96FZ2 354 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 P2RY11Q96G91 374 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 FAM83CQ9BQN1 747 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 ERP44Q9BS26 406 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 MUC3BQ9H195 1237 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 LINC00597Q9H2U6 94 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 IPO11Q9UI26 975 aaKnown RBP14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 NEU2Q9Y3R4 380 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 CXorf51AA0A1B0GTR3 108 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 ZSCAN5CA6NGD5 496 aaPredicted RBP14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 ANHXE9PGG2 379 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 NEDD8-MDP1E9PL57 170 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 NDC80O14777 642 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 MAFKO60675 156 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 OPHN1O60890 802 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 IFNB1P01574 187 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 CYP17A1P05093 508 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 RHOXF2BP0C7M4 288 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 TYRP14679 529 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 MCM3P25205 808 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 RBL1P28749 1068 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 NR1H3Q13133 447 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 HTR4Q13639 388 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 DHCR24Q15392 516 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 ERCC6LQ2NKX8 1250 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 P3H1Q32P28 736 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 LEXMQ3ZCV2 418 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 RHBDF2Q6PJF5 856 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 TP53INP2Q8IXH6 220 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 PLCD3Q8N3E9 789 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 CPA6Q8N4T0 437 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 SEC14L1Q92503 715 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 BHMTQ93088 406 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 ZNF599Q96NL3 588 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 RHOXF2Q9BQY4 288 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 SP110Q9HB58 689 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 HAUS2Q9NVX0 235 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 KIAA1522Q9P206 1035 aaPredicted RBP14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 TRHDEQ9UKU6 1024 aa14.87□□□□□ -0.03
NIPAL3-202ENST00000339255 C5orf60A6NFR6 353 aa14.86□□□□□ -0.03
NIPAL3-202ENST00000339255 RNF103O00237 685 aa14.86□□□□□ -0.03
NIPAL3-202ENST00000339255 CHADO15335 359 aa14.86□□□□□ -0.03
NIPAL3-202ENST00000339255 CACNG3O60359 315 aa14.86□□□□□ -0.03
NIPAL3-202ENST00000339255 GCATO75600 419 aa14.86□□□□□ -0.03
NIPAL3-202ENST00000339255 KRT14P02533 472 aa14.86□□□□□ -0.03
NIPAL3-202ENST00000339255 ADH5P11766 374 aa14.86□□□□□ -0.03
NIPAL3-202ENST00000339255 CLCN6P51797 869 aa14.86□□□□□ -0.03
NIPAL3-202ENST00000339255 DRG2P55039 364 aaKnown RBP14.86□□□□□ -0.03
NIPAL3-202ENST00000339255 IFI35P80217 286 aaPredicted RBP14.86□□□□□ -0.03
NIPAL3-202ENST00000339255 GAD2Q05329 585 aa14.86□□□□□ -0.03
NIPAL3-202ENST00000339255 IL10RBQ08334 325 aa14.86□□□□□ -0.03
NIPAL3-202ENST00000339255 SMAD2Q15796 467 aaKnown RBP14.86□□□□□ -0.03
NIPAL3-202ENST00000339255 RNF219Q5W0B1 726 aaPredicted RBP14.86□□□□□ -0.03
NIPAL3-202ENST00000339255 IL31Q6EBC2 164 aa14.86□□□□□ -0.03
NIPAL3-202ENST00000339255 PARM1Q6UWI2 310 aa14.86□□□□□ -0.03
NIPAL3-202ENST00000339255 ZNF354CQ86Y25 554 aa14.86□□□□□ -0.03
NIPAL3-202ENST00000339255 IFT20Q8IY31 132 aa14.86□□□□□ -0.03
NIPAL3-202ENST00000339255 CCDC33Q8N5R6 958 aa14.86□□□□□ -0.03
NIPAL3-202ENST00000339255 NSMCE1Q8WV22 266 aa14.86□□□□□ -0.03
NIPAL3-202ENST00000339255 FGF14Q92915 247 aa14.86□□□□□ -0.03
NIPAL3-202ENST00000339255 ARHGEF2Q92974 986 aaKnown RBP14.86□□□□□ -0.03
NIPAL3-202ENST00000339255 NXPE3Q969Y0 559 aa14.86□□□□□ -0.03
NIPAL3-202ENST00000339255 KXD1Q9BQD3 176 aa14.86□□□□□ -0.03
NIPAL3-202ENST00000339255 FEM1AQ9BSK4 669 aa14.86□□□□□ -0.03
NIPAL3-202ENST00000339255 C2orf49Q9BVC5 232 aaPredicted RBP14.86□□□□□ -0.03
NIPAL3-202ENST00000339255 TRMT61BQ9BVS5 477 aaKnown RBP14.86□□□□□ -0.03
NIPAL3-202ENST00000339255 PHF7Q9BWX1 381 aaPredicted RBP14.86□□□□□ -0.03
NIPAL3-202ENST00000339255 FAM129AQ9BZQ8 928 aa14.86□□□□□ -0.03
NIPAL3-202ENST00000339255 ASIC3Q9UHC3 531 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms