RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 MIB1Q86YT6 1006 aa16.35■□□□□ 0.21
NPHP3-201ENST00000337331 BRSK2Q8IWQ3 736 aa16.35■□□□□ 0.21
NPHP3-201ENST00000337331 TRAPPC12Q8WVT3 735 aa16.35■□□□□ 0.21
NPHP3-201ENST00000337331 VPS45Q9NRW7 570 aa16.35■□□□□ 0.21
NPHP3-201ENST00000337331 SQORQ9Y6N5 450 aa16.35■□□□□ 0.21
NPHP3-201ENST00000337331 A0A1W2PPW3 197 aa16.34■□□□□ 0.21
NPHP3-201ENST00000337331 CYB561D2O14569 222 aa16.34■□□□□ 0.21
NPHP3-201ENST00000337331 SNPHO15079 494 aa16.34■□□□□ 0.21
NPHP3-201ENST00000337331 MT-CO1P00395 513 aa16.34■□□□□ 0.21
NPHP3-201ENST00000337331 NAT1P18440 290 aa16.34■□□□□ 0.21
NPHP3-201ENST00000337331 S100A5P33763 92 aa16.34■□□□□ 0.21
NPHP3-201ENST00000337331 ZNF829Q3KNS6 432 aaPredicted RBP16.34■□□□□ 0.21
NPHP3-201ENST00000337331 PRR23CQ6ZRP0 262 aa16.34■□□□□ 0.21
NPHP3-201ENST00000337331 NIPA1Q7RTP0 329 aa16.34■□□□□ 0.21
NPHP3-201ENST00000337331 TTC30AQ86WT1 665 aa16.34■□□□□ 0.21
NPHP3-201ENST00000337331 PSMA8Q8TAA3 256 aa16.34■□□□□ 0.21
NPHP3-201ENST00000337331 MKL1Q969V6 931 aa16.34■□□□□ 0.21
NPHP3-201ENST00000337331 RPRD1AQ96P16 312 aaPredicted RBP16.34■□□□□ 0.21
NPHP3-201ENST00000337331 TXLNGYQ9BZA5 131 aa16.34■□□□□ 0.21
NPHP3-201ENST00000337331 TCF7L2Q9NQB0 619 aa16.34■□□□□ 0.21
NPHP3-201ENST00000337331 SPEF1Q9Y4P9 236 aa16.34■□□□□ 0.21
NPHP3-201ENST00000337331 BAIAP3O94812 1187 aa16.34■□□□□ 0.21
NPHP3-201ENST00000337331 HSPA1AP0DMV8 641 aaKnown RBP16.34■□□□□ 0.21
NPHP3-201ENST00000337331 HSPA1BP0DMV9 641 aaKnown RBP16.34■□□□□ 0.21
NPHP3-201ENST00000337331 INSRRP14616 1297 aa16.34■□□□□ 0.21
NPHP3-201ENST00000337331 PLIN5Q00G26 463 aa16.34■□□□□ 0.21
NPHP3-201ENST00000337331 ATP13A4Q4VNC1 1196 aa16.34■□□□□ 0.21
NPHP3-201ENST00000337331 PCDH20Q8N6Y1 951 aaKnown RBP16.34■□□□□ 0.21
NPHP3-201ENST00000337331 POC5Q8NA72 575 aa16.34■□□□□ 0.21
NPHP3-201ENST00000337331 OSBPL11Q9BXB4 747 aa16.34■□□□□ 0.21
NPHP3-201ENST00000337331 KCNK1O00180 336 aa16.34■□□□□ 0.21
NPHP3-201ENST00000337331 CCRL2O00421 344 aa16.34■□□□□ 0.21
NPHP3-201ENST00000337331 GSSP48637 474 aa16.34■□□□□ 0.21
NPHP3-201ENST00000337331 CDK9P50750 372 aaKnown RBP16.34■□□□□ 0.21
NPHP3-201ENST00000337331 LY6KQ17RY6 165 aa16.34■□□□□ 0.21
NPHP3-201ENST00000337331 C10orf120Q5SQS8 335 aa16.34■□□□□ 0.21
NPHP3-201ENST00000337331 ZPBP2Q6X784 338 aa16.34■□□□□ 0.21
NPHP3-201ENST00000337331 DCP1BQ8IZD4 617 aaKnown RBP16.34■□□□□ 0.21
NPHP3-201ENST00000337331 BPIFB6Q8NFQ5 453 aa16.34■□□□□ 0.21
NPHP3-201ENST00000337331 PRICKLE1Q96MT3 831 aaPredicted RBP16.34■□□□□ 0.21
NPHP3-201ENST00000337331 GPRC5DQ9NZD1 345 aa16.34■□□□□ 0.21
NPHP3-201ENST00000337331 SORCS3Q9UPU3 1222 aa16.34■□□□□ 0.21
NPHP3-201ENST00000337331 TBKBP1A7MCY6 615 aa16.33■□□□□ 0.21
NPHP3-201ENST00000337331 H6PDO95479 791 aa16.33■□□□□ 0.21
NPHP3-201ENST00000337331 SLC26A2P50443 739 aa16.33■□□□□ 0.21
NPHP3-201ENST00000337331 POU5F1Q01860 360 aaKnown RBP16.33■□□□□ 0.21
NPHP3-201ENST00000337331 AKT1S1Q96B36 256 aa16.33■□□□□ 0.21
NPHP3-201ENST00000337331 SH3KBP1Q96B97 665 aa16.33■□□□□ 0.21
NPHP3-201ENST00000337331 PARK7Q99497 189 aaKnown RBP16.33■□□□□ 0.21
NPHP3-201ENST00000337331 MUC3BQ9H195 1237 aa16.33■□□□□ 0.21
NPHP3-201ENST00000337331 ZNF395Q9H8N7 513 aaPredicted RBP16.33■□□□□ 0.21
NPHP3-201ENST00000337331 H3BRB1 525 aa16.33■□□□□ 0.2
NPHP3-201ENST00000337331 FKBP9O95302 570 aa16.33■□□□□ 0.2
NPHP3-201ENST00000337331 ADRB2P07550 413 aa16.33■□□□□ 0.2
NPHP3-201ENST00000337331 ZNF23P17027 643 aa16.33■□□□□ 0.2
NPHP3-201ENST00000337331 GLRA2P23416 452 aa16.33■□□□□ 0.2
NPHP3-201ENST00000337331 AKT1P31749 480 aa16.33■□□□□ 0.2
NPHP3-201ENST00000337331 GEMP55040 296 aa16.33■□□□□ 0.2
NPHP3-201ENST00000337331 COPZ1P61923 177 aa16.33■□□□□ 0.2
NPHP3-201ENST00000337331 CNTN2Q02246 1040 aa16.33■□□□□ 0.2
NPHP3-201ENST00000337331 N4BP2L1Q5TBK1 243 aaPredicted RBP16.33■□□□□ 0.2
NPHP3-201ENST00000337331 SCARA3Q6AZY7 606 aa16.33■□□□□ 0.2
NPHP3-201ENST00000337331 FKBP9P1Q75LS8 142 aa16.33■□□□□ 0.2
NPHP3-201ENST00000337331 BNIPLQ7Z465 357 aa16.33■□□□□ 0.2
NPHP3-201ENST00000337331 SCUBE3Q8IX30 993 aa16.33■□□□□ 0.2
NPHP3-201ENST00000337331 EBF4Q9BQW3 602 aa16.33■□□□□ 0.2
NPHP3-201ENST00000337331 WDR18Q9BV38 432 aa16.33■□□□□ 0.2
NPHP3-201ENST00000337331 TUT1Q9H6E5 874 aaKnown RBP16.33■□□□□ 0.2
NPHP3-201ENST00000337331 FAM198AQ9UFP1 575 aa16.33■□□□□ 0.2
NPHP3-201ENST00000337331 GOLGA4Q13439 2230 aaKnown RBP16.33■□□□□ 0.2
NPHP3-201ENST00000337331 TGDSO95455 350 aa16.33■□□□□ 0.2
NPHP3-201ENST00000337331 CHRNB2P17787 502 aa16.33■□□□□ 0.2
NPHP3-201ENST00000337331 CNTFP26441 200 aa16.33■□□□□ 0.2
NPHP3-201ENST00000337331 RGS4P49798 205 aa16.33■□□□□ 0.2
NPHP3-201ENST00000337331 ECM1Q16610 540 aa16.33■□□□□ 0.2
NPHP3-201ENST00000337331 CTC1Q2NKJ3 1217 aa16.33■□□□□ 0.2
NPHP3-201ENST00000337331 AASDHQ4L235 1098 aaPredicted RBP16.33■□□□□ 0.2
NPHP3-201ENST00000337331 ZRANB3Q5FWF4 1079 aa16.33■□□□□ 0.2
NPHP3-201ENST00000337331 OTUD3Q5T2D3 398 aaPredicted RBP16.33■□□□□ 0.2
NPHP3-201ENST00000337331 ZNF555Q8NEP9 628 aa16.33■□□□□ 0.2
NPHP3-201ENST00000337331 OR9Q1Q8NGQ5 310 aa16.33■□□□□ 0.2
NPHP3-201ENST00000337331 C12orf43Q96C57 262 aaKnown RBP16.33■□□□□ 0.2
NPHP3-201ENST00000337331 OSMRQ99650 979 aa16.33■□□□□ 0.2
NPHP3-201ENST00000337331 GPR63Q9BZJ6 419 aa16.33■□□□□ 0.2
NPHP3-201ENST00000337331 REXO4Q9GZR2 422 aaKnown RBP16.33■□□□□ 0.2
NPHP3-201ENST00000337331 PRKAG2Q9UGJ0 569 aa16.33■□□□□ 0.2
NPHP3-201ENST00000337331 AAR2Q9Y312 384 aaKnown RBP16.33■□□□□ 0.2
NPHP3-201ENST00000337331 FARP1Q9Y4F1 1045 aaPredicted RBP16.33■□□□□ 0.2
NPHP3-201ENST00000337331 PDZK1P1A8MUH7 402 aa16.33■□□□□ 0.2
NPHP3-201ENST00000337331 WNT10BO00744 389 aa16.33■□□□□ 0.2
NPHP3-201ENST00000337331 HOXA10P31260 410 aaPredicted RBP16.33■□□□□ 0.2
NPHP3-201ENST00000337331 FBXO47Q5MNV8 452 aa16.33■□□□□ 0.2
NPHP3-201ENST00000337331 ZNF410Q86VK4 478 aa16.33■□□□□ 0.2
NPHP3-201ENST00000337331 ADGRF2Q8IZF7 708 aa16.33■□□□□ 0.2
NPHP3-201ENST00000337331 TTC30BQ8N4P2 665 aa16.33■□□□□ 0.2
NPHP3-201ENST00000337331 SHC3Q92529 594 aa16.33■□□□□ 0.2
NPHP3-201ENST00000337331 CEP295NLQ96MC4 621 aa16.33■□□□□ 0.2
NPHP3-201ENST00000337331 SLITRK1Q96PX8 696 aa16.33■□□□□ 0.2
NPHP3-201ENST00000337331 APOL5Q9BWW9 433 aa16.33■□□□□ 0.2
NPHP3-201ENST00000337331 UNKQ9C0B0 810 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms