RNA–Protein interactions for RNA: ENST00000336128.11

ZNF548-201, Transcript of zinc finger protein 548, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZNF548, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-201ENST00000336128 LRRC6Q86X45 466 aa12.72□□□□□ -0.37
ZNF548-201ENST00000336128 CHSY1Q86X52 802 aa12.72□□□□□ -0.37
ZNF548-201ENST00000336128 CCNJLQ8IV13 435 aa12.72□□□□□ -0.37
ZNF548-201ENST00000336128 LRRC34Q8IZ02 419 aa12.72□□□□□ -0.37
ZNF548-201ENST00000336128 UMODL1-AS1Q8N2C9 162 aa12.72□□□□□ -0.37
ZNF548-201ENST00000336128 TMEM199Q8N511 208 aa12.72□□□□□ -0.37
ZNF548-201ENST00000336128 ZNF461Q8TAF7 563 aa12.72□□□□□ -0.37
ZNF548-201ENST00000336128 IGSF8Q969P0 613 aa12.72□□□□□ -0.37
ZNF548-201ENST00000336128 ZNF512Q96ME7 567 aaPredicted RBP12.72□□□□□ -0.37
ZNF548-201ENST00000336128 CYP4F11Q9HBI6 524 aa12.72□□□□□ -0.37
ZNF548-201ENST00000336128 MOCS1Q9NZB8 636 aa12.72□□□□□ -0.37
ZNF548-201ENST00000336128 HSFX1Q9UBD0 423 aa12.72□□□□□ -0.37
ZNF548-201ENST00000336128 ZNF180Q9UJW8 692 aa12.72□□□□□ -0.37
ZNF548-201ENST00000336128 HBS1LQ9Y450 684 aaKnown RBP12.72□□□□□ -0.37
ZNF548-201ENST00000336128 EBAG9O00559 213 aa12.71□□□□□ -0.37
ZNF548-201ENST00000336128 PSMD3O43242 534 aa12.71□□□□□ -0.37
ZNF548-201ENST00000336128 TYROBPO43914 113 aa12.71□□□□□ -0.37
ZNF548-201ENST00000336128 CACNG3O60359 315 aa12.71□□□□□ -0.37
ZNF548-201ENST00000336128 UGT1A9O60656 530 aa12.71□□□□□ -0.37
ZNF548-201ENST00000336128 URODP06132 367 aa12.71□□□□□ -0.37
ZNF548-201ENST00000336128 HMGA1P17096 107 aaKnown RBP12.71□□□□□ -0.37
ZNF548-201ENST00000336128 KRT4P19013 534 aa12.71□□□□□ -0.37
ZNF548-201ENST00000336128 GBP2P32456 591 aaPredicted RBP12.71□□□□□ -0.37
ZNF548-201ENST00000336128 NDST2P52849 883 aa12.71□□□□□ -0.37
ZNF548-201ENST00000336128 WDR4P57081 412 aaKnown RBP12.71□□□□□ -0.37
ZNF548-201ENST00000336128 TTC39BQ5VTQ0 682 aaPredicted RBP12.71□□□□□ -0.37
ZNF548-201ENST00000336128 NADSYN1Q6IA69 706 aa12.71□□□□□ -0.37
ZNF548-201ENST00000336128 FBXL22Q6P050 247 aa12.71□□□□□ -0.37
ZNF548-201ENST00000336128 NECAB2Q7Z6G3 386 aa12.71□□□□□ -0.37
ZNF548-201ENST00000336128 CPLX4Q7Z7G2 160 aa12.71□□□□□ -0.37
ZNF548-201ENST00000336128 DDX53Q86TM3 631 aaKnown RBP12.71□□□□□ -0.37
ZNF548-201ENST00000336128 LRRC49Q8IUZ0 686 aa12.71□□□□□ -0.37
ZNF548-201ENST00000336128 KLHDC8BQ8IXV7 354 aa12.71□□□□□ -0.37
ZNF548-201ENST00000336128 ZNF276Q8N554 614 aa12.71□□□□□ -0.37
ZNF548-201ENST00000336128 DENND1AQ8TEH3 1009 aa12.71□□□□□ -0.37
ZNF548-201ENST00000336128 OXNAD1Q96HP4 312 aaPredicted RBP12.71□□□□□ -0.37
ZNF548-201ENST00000336128 NAT9Q9BTE0 207 aa12.71□□□□□ -0.37
ZNF548-201ENST00000336128 LRRC40Q9H9A6 602 aa12.71□□□□□ -0.37
ZNF548-201ENST00000336128 UGT1A7Q9HAW7 530 aa12.71□□□□□ -0.37
ZNF548-201ENST00000336128 UGT1A10Q9HAW8 530 aa12.71□□□□□ -0.37
ZNF548-201ENST00000336128 UGT1A8Q9HAW9 530 aa12.71□□□□□ -0.37
ZNF548-201ENST00000336128 GLOD4Q9HC38 313 aa12.71□□□□□ -0.37
ZNF548-201ENST00000336128 DNMT3LQ9UJW3 386 aa12.71□□□□□ -0.37
ZNF548-201ENST00000336128 NUP205Q92621 2012 aa12.71□□□□□ -0.37
ZNF548-201ENST00000336128 CEP350Q5VT06 3117 aa12.71□□□□□ -0.37
ZNF548-201ENST00000336128 MYO18AQ92614 2054 aaKnown RBP12.71□□□□□ -0.38
ZNF548-201ENST00000336128 GOLGA6L7A0A1B0GV03 622 aa12.71□□□□□ -0.38
ZNF548-201ENST00000336128 ZNF840PA6NDX5 716 aa12.71□□□□□ -0.38
ZNF548-201ENST00000336128 DRGXA6NNA5 263 aa12.71□□□□□ -0.38
ZNF548-201ENST00000336128 ALDH1A2O94788 518 aa12.71□□□□□ -0.38
ZNF548-201ENST00000336128 VIMP08670 466 aaKnown RBP12.71□□□□□ -0.38
ZNF548-201ENST00000336128 TACR2P21452 398 aa12.71□□□□□ -0.38
ZNF548-201ENST00000336128 CA4P22748 312 aa12.71□□□□□ -0.38
ZNF548-201ENST00000336128 RPA3P35244 121 aaPredicted RBP12.71□□□□□ -0.38
ZNF548-201ENST00000336128 ATP5C1P36542 298 aaKnown RBP12.71□□□□□ -0.38
ZNF548-201ENST00000336128 KCNQ1P51787 676 aa12.71□□□□□ -0.38
ZNF548-201ENST00000336128 RAB33AQ14088 237 aa12.71□□□□□ -0.38
ZNF548-201ENST00000336128 CRYMQ14894 314 aa12.71□□□□□ -0.38
ZNF548-201ENST00000336128 ACBD5Q5T8D3 534 aaPredicted RBP12.71□□□□□ -0.38
ZNF548-201ENST00000336128 SNX30Q5VWJ9 437 aa12.71□□□□□ -0.38
ZNF548-201ENST00000336128 CYS1Q717R9 158 aa12.71□□□□□ -0.38
ZNF548-201ENST00000336128 AUTS2Q8WXX7 1259 aa12.71□□□□□ -0.38
ZNF548-201ENST00000336128 HMCESQ96FZ2 354 aa12.71□□□□□ -0.38
ZNF548-201ENST00000336128 ZNF419Q96HQ0 510 aaPredicted RBP12.71□□□□□ -0.38
ZNF548-201ENST00000336128 SERAC1Q96JX3 654 aa12.71□□□□□ -0.38
ZNF548-201ENST00000336128 RPRD1AQ96P16 312 aaPredicted RBP12.71□□□□□ -0.38
ZNF548-201ENST00000336128 FCRL5Q96RD9 977 aa12.71□□□□□ -0.38
ZNF548-201ENST00000336128 KLF6Q99612 283 aaPredicted RBP12.71□□□□□ -0.38
ZNF548-201ENST00000336128 UBP1Q9NZI7 540 aa12.71□□□□□ -0.38
ZNF548-201ENST00000336128 IPO11Q9UI26 975 aaKnown RBP12.71□□□□□ -0.38
ZNF548-201ENST00000336128 KIAA1671Q9BY89 1806 aa12.71□□□□□ -0.38
ZNF548-201ENST00000336128 TRIM49D1C9J1S8 452 aa12.7□□□□□ -0.38
ZNF548-201ENST00000336128 GOLGA8RI6L899 631 aa12.7□□□□□ -0.38
ZNF548-201ENST00000336128 BAIAP3O94812 1187 aa12.7□□□□□ -0.38
ZNF548-201ENST00000336128 GJB5O95377 273 aa12.7□□□□□ -0.38
ZNF548-201ENST00000336128 HLA-DQB2P05538 268 aa12.7□□□□□ -0.38
ZNF548-201ENST00000336128 ALDH1A3P47895 512 aa12.7□□□□□ -0.38
ZNF548-201ENST00000336128 MTA1Q13330 715 aa12.7□□□□□ -0.38
ZNF548-201ENST00000336128 PLD1Q13393 1074 aa12.7□□□□□ -0.38
ZNF548-201ENST00000336128 HECTD3Q5T447 861 aa12.7□□□□□ -0.38
ZNF548-201ENST00000336128 MARK2Q7KZI7 788 aaKnown RBP12.7□□□□□ -0.38
ZNF548-201ENST00000336128 CIR1Q86X95 450 aaPredicted RBP12.7□□□□□ -0.38
ZNF548-201ENST00000336128 UNC5BQ8IZJ1 945 aa12.7□□□□□ -0.38
ZNF548-201ENST00000336128 DNAAF3Q8N9W5 541 aa12.7□□□□□ -0.38
ZNF548-201ENST00000336128 MAGEB18Q96M61 343 aa12.7□□□□□ -0.38
ZNF548-201ENST00000336128 YME1L1Q96TA2 773 aa12.7□□□□□ -0.38
ZNF548-201ENST00000336128 PAIP2Q9BPZ3 127 aaKnown RBP12.7□□□□□ -0.38
ZNF548-201ENST00000336128 APOL2Q9BQE5 337 aa12.7□□□□□ -0.38
ZNF548-201ENST00000336128 NACA2Q9H009 215 aa12.7□□□□□ -0.38
ZNF548-201ENST00000336128 RBM22Q9NW64 420 aaKnown RBP eCLIP12.7□□□□□ -0.38
ZNF548-201ENST00000336128 DONSONQ9NYP3 566 aa12.7□□□□□ -0.38
ZNF548-201ENST00000336128 BFARQ9NZS9 450 aa12.7□□□□□ -0.38
ZNF548-201ENST00000336128 SAMD15Q9P1V8 674 aa12.7□□□□□ -0.38
ZNF548-201ENST00000336128 PTPRSQ13332 1948 aa12.7□□□□□ -0.38
ZNF548-201ENST00000336128 CARNS1A5YM72 827 aa12.7□□□□□ -0.38
ZNF548-201ENST00000336128 TCP11X1B4DZS4 312 aa12.7□□□□□ -0.38
ZNF548-201ENST00000336128 KRT37O76014 449 aa12.7□□□□□ -0.38
ZNF548-201ENST00000336128 ZWINTO95229 277 aa12.7□□□□□ -0.38
ZNF548-201ENST00000336128 ASMTLO95671 621 aa12.7□□□□□ -0.38
ZNF548-201ENST00000336128 SNRPAP09012 282 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms