RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 PPP2R3CQ969Q6 453 aa12.59□□□□□ -0.39
VPS33B-201ENST00000333371 TRIM4Q9C037 500 aa12.59□□□□□ -0.39
VPS33B-201ENST00000333371 PCDHGB4Q9UN71 923 aa12.59□□□□□ -0.39
VPS33B-201ENST00000333371 SORCS3Q9UPU3 1222 aa12.59□□□□□ -0.39
VPS33B-201ENST00000333371 PCDHGB5Q9Y5G0 923 aa12.59□□□□□ -0.39
VPS33B-201ENST00000333371 H3BNX3 289 aa12.58□□□□□ -0.39
VPS33B-201ENST00000333371 TK2O00142 265 aa12.58□□□□□ -0.39
VPS33B-201ENST00000333371 OPHN1O60890 802 aa12.58□□□□□ -0.39
VPS33B-201ENST00000333371 CELF2O95319 508 aaKnown RBP12.58□□□□□ -0.39
VPS33B-201ENST00000333371 GRK2P25098 689 aa12.58□□□□□ -0.39
VPS33B-201ENST00000333371 KLF10Q13118 480 aa12.58□□□□□ -0.39
VPS33B-201ENST00000333371 C11orf91Q3C1V1 193 aa12.58□□□□□ -0.39
VPS33B-201ENST00000333371 RASIP1Q5U651 963 aa12.58□□□□□ -0.39
VPS33B-201ENST00000333371 FAM219BQ5XKK7 198 aa12.58□□□□□ -0.39
VPS33B-201ENST00000333371 FBXL19Q6PCT2 694 aa12.58□□□□□ -0.39
VPS33B-201ENST00000333371 OSTM1Q86WC4 334 aa12.58□□□□□ -0.39
VPS33B-201ENST00000333371 TTC39CQ8N584 583 aa12.58□□□□□ -0.39
VPS33B-201ENST00000333371 RBBP8Q99708 897 aa12.58□□□□□ -0.39
VPS33B-201ENST00000333371 CHRAC1Q9NRG0 131 aa12.58□□□□□ -0.39
VPS33B-201ENST00000333371 PDP2Q9P2J9 529 aa12.58□□□□□ -0.39
VPS33B-201ENST00000333371 GTF2IRD1Q9UHL9 959 aa12.58□□□□□ -0.39
VPS33B-201ENST00000333371 CAPN8A6NHC0 703 aa12.58□□□□□ -0.4
VPS33B-201ENST00000333371 JUNP05412 331 aaKnown RBP12.58□□□□□ -0.4
VPS33B-201ENST00000333371 MX2P20592 715 aa12.58□□□□□ -0.4
VPS33B-201ENST00000333371 EPHA3P29320 983 aa12.58□□□□□ -0.4
VPS33B-201ENST00000333371 AVPR1AP37288 418 aa12.58□□□□□ -0.4
VPS33B-201ENST00000333371 ROR2Q01974 943 aaKnown RBP12.58□□□□□ -0.4
VPS33B-201ENST00000333371 FAM110CQ1W6H9 321 aa12.58□□□□□ -0.4
VPS33B-201ENST00000333371 CNPY1Q3B7I2 92 aa12.58□□□□□ -0.4
VPS33B-201ENST00000333371 GRAMD1BQ3KR37 738 aa12.58□□□□□ -0.4
VPS33B-201ENST00000333371 SLC25A52Q3SY17 297 aa12.58□□□□□ -0.4
VPS33B-201ENST00000333371 FBXO47Q5MNV8 452 aa12.58□□□□□ -0.4
VPS33B-201ENST00000333371 SPRYD7Q5W111 196 aa12.58□□□□□ -0.4
VPS33B-201ENST00000333371 TMEM198Q66K66 360 aa12.58□□□□□ -0.4
VPS33B-201ENST00000333371 STRADAQ7RTN6 431 aa12.58□□□□□ -0.4
VPS33B-201ENST00000333371 NPWQ8N729 165 aa12.58□□□□□ -0.4
VPS33B-201ENST00000333371 TRAPPC9Q96Q05 1148 aa12.58□□□□□ -0.4
VPS33B-201ENST00000333371 GCNAQ96QF7 691 aa12.58□□□□□ -0.4
VPS33B-201ENST00000333371 GATA5Q9BWX5 397 aaPredicted RBP12.58□□□□□ -0.4
VPS33B-201ENST00000333371 CDH19Q9H159 772 aa12.58□□□□□ -0.4
VPS33B-201ENST00000333371 DNAJB4Q9UDY4 337 aa12.58□□□□□ -0.4
VPS33B-201ENST00000333371 PCDHB12Q9Y5F1 795 aa12.58□□□□□ -0.4
VPS33B-201ENST00000333371 RALGAPA2Q2PPJ7 1873 aa12.58□□□□□ -0.4
VPS33B-201ENST00000333371 ZCWPW2A0A1B0GU75 182 aa12.58□□□□□ -0.4
VPS33B-201ENST00000333371 KPNA7A9QM74 516 aa12.58□□□□□ -0.4
VPS33B-201ENST00000333371 HACD1B0YJ81 288 aa12.58□□□□□ -0.4
VPS33B-201ENST00000333371 EEF2KO00418 725 aaKnown RBP12.58□□□□□ -0.4
VPS33B-201ENST00000333371 ZBTB24O43167 697 aaPredicted RBP12.58□□□□□ -0.4
VPS33B-201ENST00000333371 PHGDHO43175 533 aaKnown RBP12.58□□□□□ -0.4
VPS33B-201ENST00000333371 C2P06681 752 aa12.58□□□□□ -0.4
VPS33B-201ENST00000333371 ALOX15P16050 662 aaPredicted RBP12.58□□□□□ -0.4
VPS33B-201ENST00000333371 PTPN3P26045 913 aa12.58□□□□□ -0.4
VPS33B-201ENST00000333371 GSTT1P30711 240 aa12.58□□□□□ -0.4
VPS33B-201ENST00000333371 NUDT2P50583 147 aa12.58□□□□□ -0.4
VPS33B-201ENST00000333371 RAB27AP51159 221 aa12.58□□□□□ -0.4
VPS33B-201ENST00000333371 BTKQ06187 659 aa12.58□□□□□ -0.4
VPS33B-201ENST00000333371 IQSEC1Q6DN90 963 aa12.58□□□□□ -0.4
VPS33B-201ENST00000333371 AAGABQ6PD74 315 aa12.58□□□□□ -0.4
VPS33B-201ENST00000333371 EPGNQ6UW88 154 aa12.58□□□□□ -0.4
VPS33B-201ENST00000333371 FBXW8Q8N3Y1 598 aa12.58□□□□□ -0.4
VPS33B-201ENST00000333371 SPATA6LQ8N4H0 392 aa12.58□□□□□ -0.4
VPS33B-201ENST00000333371 TDRD5Q8NAT2 981 aaKnown RBP12.58□□□□□ -0.4
VPS33B-201ENST00000333371 BEST2Q8NFU1 509 aa12.58□□□□□ -0.4
VPS33B-201ENST00000333371 CMTM5Q96DZ9 223 aa12.58□□□□□ -0.4
VPS33B-201ENST00000333371 CPNE1Q99829 537 aa12.58□□□□□ -0.4
VPS33B-201ENST00000333371 KLHL4Q9C0H6 718 aa12.58□□□□□ -0.4
VPS33B-201ENST00000333371 SNX25Q9H3E2 840 aa12.58□□□□□ -0.4
VPS33B-201ENST00000333371 IARS2Q9NSE4 1012 aaKnown RBP12.58□□□□□ -0.4
VPS33B-201ENST00000333371 VANGL2Q9ULK5 521 aa12.58□□□□□ -0.4
VPS33B-201ENST00000333371 SSX2IPQ9Y2D8 614 aa12.58□□□□□ -0.4
VPS33B-201ENST00000333371 PDCD11Q14690 1871 aaKnown RBP12.57□□□□□ -0.4
VPS33B-201ENST00000333371 NRP1O14786 923 aa12.57□□□□□ -0.4
VPS33B-201ENST00000333371 OR6B1O95007 311 aa12.57□□□□□ -0.4
VPS33B-201ENST00000333371 ERCC2P18074 760 aa12.57□□□□□ -0.4
VPS33B-201ENST00000333371 GLUD2P49448 558 aa12.57□□□□□ -0.4
VPS33B-201ENST00000333371 DEUP1Q05D60 604 aa12.57□□□□□ -0.4
VPS33B-201ENST00000333371 ZNF460Q14592 562 aa12.57□□□□□ -0.4
VPS33B-201ENST00000333371 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.57□□□□□ -0.4
VPS33B-201ENST00000333371 NPLOC4Q8TAT6 608 aa12.57□□□□□ -0.4
VPS33B-201ENST00000333371 URGCPQ8TCY9 931 aa12.57□□□□□ -0.4
VPS33B-201ENST00000333371 SIKE1Q9BRV8 207 aa12.57□□□□□ -0.4
VPS33B-201ENST00000333371 DYNC1LI2O43237 492 aaPredicted RBP12.57□□□□□ -0.4
VPS33B-201ENST00000333371 SNUPNO95149 360 aaKnown RBP12.57□□□□□ -0.4
VPS33B-201ENST00000333371 ATP5BP06576 529 aaKnown RBP12.57□□□□□ -0.4
VPS33B-201ENST00000333371 ARSAP15289 507 aa12.57□□□□□ -0.4
VPS33B-201ENST00000333371 VCLP18206 1134 aa12.57□□□□□ -0.4
VPS33B-201ENST00000333371 CD68P34810 354 aaPredicted RBP12.57□□□□□ -0.4
VPS33B-201ENST00000333371 LIMK2P53671 638 aa12.57□□□□□ -0.4
VPS33B-201ENST00000333371 PKNOX1P55347 436 aa12.57□□□□□ -0.4
VPS33B-201ENST00000333371 ZBTB17Q13105 803 aa12.57□□□□□ -0.4
VPS33B-201ENST00000333371 MED21Q13503 144 aa12.57□□□□□ -0.4
VPS33B-201ENST00000333371 HNRNPDQ14103 355 aaKnown RBP12.57□□□□□ -0.4
VPS33B-201ENST00000333371 PDK1Q15118 436 aa12.57□□□□□ -0.4
VPS33B-201ENST00000333371 GRTP1Q5TC63 336 aa12.57□□□□□ -0.4
VPS33B-201ENST00000333371 ZNF410Q86VK4 478 aa12.57□□□□□ -0.4
VPS33B-201ENST00000333371 UNC93AQ86WB7 457 aa12.57□□□□□ -0.4
VPS33B-201ENST00000333371 SNX32Q86XE0 403 aa12.57□□□□□ -0.4
VPS33B-201ENST00000333371 NT5DC4Q86YG4 428 aa12.57□□□□□ -0.4
VPS33B-201ENST00000333371 SLC7A14Q8TBB6 771 aa12.57□□□□□ -0.4
VPS33B-201ENST00000333371 USP13Q92995 863 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms