RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 CHD5Q8TDI0 1954 aa9.75□□□□□ -0.85
C11orf54-201ENST00000331239 A0A1B0GVM2 712 aa9.75□□□□□ -0.85
C11orf54-201ENST00000331239 TCAF2A6NFQ2 919 aa9.75□□□□□ -0.85
C11orf54-201ENST00000331239 ANHXE9PGG2 379 aa9.75□□□□□ -0.85
C11orf54-201ENST00000331239 LRIG2O94898 1065 aa9.75□□□□□ -0.85
C11orf54-201ENST00000331239 KLKB1P03952 638 aa9.75□□□□□ -0.85
C11orf54-201ENST00000331239 RPL21P46778 160 aaKnown RBP9.75□□□□□ -0.85
C11orf54-201ENST00000331239 ATXN1P54253 815 aaKnown RBP9.75□□□□□ -0.85
C11orf54-201ENST00000331239 DMC1Q14565 340 aa9.75□□□□□ -0.85
C11orf54-201ENST00000331239 FAM133BQ5BKY9 247 aaKnown RBP9.75□□□□□ -0.85
C11orf54-201ENST00000331239 KCNT1Q5JUK3 1230 aa9.75□□□□□ -0.85
C11orf54-201ENST00000331239 BPIFB1Q8TDL5 484 aa9.75□□□□□ -0.85
C11orf54-201ENST00000331239 GRK7Q8WTQ7 553 aa9.75□□□□□ -0.85
C11orf54-201ENST00000331239 OSCP1Q8WVF1 389 aa9.75□□□□□ -0.85
C11orf54-201ENST00000331239 GUCD1Q96NT3 240 aa9.75□□□□□ -0.85
C11orf54-201ENST00000331239 TSGA13Q96PP4 275 aa9.75□□□□□ -0.85
C11orf54-201ENST00000331239 CYP2S1Q96SQ9 504 aa9.75□□□□□ -0.85
C11orf54-201ENST00000331239 CALN1Q9BXU9 219 aa9.75□□□□□ -0.85
C11orf54-201ENST00000331239 ARHGEF4Q9NR80 690 aa9.75□□□□□ -0.85
C11orf54-201ENST00000331239 GGA2Q9UJY4 613 aa9.75□□□□□ -0.85
C11orf54-201ENST00000331239 TBC1D30Q9Y2I9 924 aa9.75□□□□□ -0.85
C11orf54-201ENST00000331239 SYNJ2BP-COX16A0A087WUM0 186 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 GMNCA6NCL1 334 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 STIP1P31948 543 aaKnown RBP9.74□□□□□ -0.85
C11orf54-201ENST00000331239 KCNQ1P51787 676 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 NR1H3Q13133 447 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 PDK1Q15118 436 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 AAK1Q2M2I8 961 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 SMTNL2Q2TAL5 461 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 PARP15Q460N3 678 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 ATP13A4Q4VNC1 1196 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 FAM78AQ5JUQ0 283 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 ARTNQ5T4W7 220 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 C6orf118Q5T5N4 469 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 FBXL22Q6P050 247 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 YTHDF3Q7Z739 585 aaKnown RBP9.74□□□□□ -0.85
C11orf54-201ENST00000331239 METTL3Q86U44 580 aaKnown RBP9.74□□□□□ -0.85
C11orf54-201ENST00000331239 CHSY1Q86X52 802 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 RFX6Q8HWS3 928 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 DENND1CQ8IV53 801 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 CCDC117Q8IWD4 279 aaPredicted RBP9.74□□□□□ -0.85
C11orf54-201ENST00000331239 OTUD6BQ8N6M0 293 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 PQLC3Q8N755 202 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 PLD5Q8N7P1 536 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 PCDH19Q8TAB3 1148 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 CCHCR1Q8TD31 782 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 RNF25Q96BH1 459 aaPredicted RBP9.74□□□□□ -0.85
C11orf54-201ENST00000331239 MSANTD3Q96H12 275 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 SLC22A12Q96S37 553 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 MAGEH1Q9H213 219 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 HAUS2Q9NVX0 235 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 COX16Q9P0S2 106 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 IGSF9Q9P2J2 1179 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 PRKAG3Q9UGI9 489 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 NUDT5Q9UKK9 219 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 NEU3Q9UQ49 428 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 DOCK8Q8NF50 2099 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 ILVBLA1L0T0 632 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 I6L893 689 aaPredicted RBP9.74□□□□□ -0.85
C11orf54-201ENST00000331239 CHADO15335 359 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 MBTPS2O43462 519 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 NFATC1O95644 943 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 PENKP01210 267 aaPredicted RBP9.74□□□□□ -0.85
C11orf54-201ENST00000331239 SHBGP04278 402 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 COILP38432 576 aaPredicted RBP9.74□□□□□ -0.85
C11orf54-201ENST00000331239 PLK1P53350 603 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 NTHL1P78549 312 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 SMAD2Q15796 467 aaKnown RBP9.74□□□□□ -0.85
C11orf54-201ENST00000331239 CA9Q16790 459 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 RAB6CQ53S08 254 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 PPP6R3Q5H9R7 873 aaPredicted RBP9.74□□□□□ -0.85
C11orf54-201ENST00000331239 NADSYN1Q6IA69 706 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 C1orf228Q6PIY5 440 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 CPNE8Q86YQ8 564 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 SUGP1Q8IWZ8 645 aaKnown RBP9.74□□□□□ -0.85
C11orf54-201ENST00000331239 CCDC105Q8IYK2 499 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 P3H4Q92791 437 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 ATP2A3Q93084 1043 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 TMA16Q96EY4 203 aaKnown RBP9.74□□□□□ -0.85
C11orf54-201ENST00000331239 PGM2Q96G03 612 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 PPP1R2P1Q96PQ5 205 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 PHF7Q9BWX1 381 aaPredicted RBP9.74□□□□□ -0.85
C11orf54-201ENST00000331239 FAM129AQ9BZQ8 928 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 RAB6CQ9H0N0 254 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 LRRC4CQ9HCJ2 640 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 ANLNQ9NQW6 1124 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 GKN1Q9NS71 199 aa9.74□□□□□ -0.85
C11orf54-201ENST00000331239 USP15Q9Y4E8 981 aaPredicted RBP9.74□□□□□ -0.85
C11orf54-201ENST00000331239 DOCK6Q96HP0 2047 aa9.73□□□□□ -0.85
C11orf54-201ENST00000331239 TCRBV7S2A1N4TA0A589 114 aa9.73□□□□□ -0.85
C11orf54-201ENST00000331239 PPP1R12AO14974 1030 aaPredicted RBP9.73□□□□□ -0.85
C11orf54-201ENST00000331239 HOXC11O43248 304 aaPredicted RBP9.73□□□□□ -0.85
C11orf54-201ENST00000331239 CST8O60676 142 aa9.73□□□□□ -0.85
C11orf54-201ENST00000331239 CSPG5O95196 566 aa9.73□□□□□ -0.85
C11orf54-201ENST00000331239 ADH1CP00326 375 aa9.73□□□□□ -0.85
C11orf54-201ENST00000331239 ITGAVP06756 1048 aa9.73□□□□□ -0.85
C11orf54-201ENST00000331239 GOT1P17174 413 aa9.73□□□□□ -0.85
C11orf54-201ENST00000331239 ERCC2P18074 760 aa9.73□□□□□ -0.85
C11orf54-201ENST00000331239 EPHB2P29323 1055 aa9.73□□□□□ -0.85
C11orf54-201ENST00000331239 TNK2Q07912 1038 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms