RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 ILKAPQ9H0C8 392 aaPredicted RBP24.8■■□□□ 1.56
SOX1-201ENST00000330949 TPK1Q9H3S4 243 aa24.8■■□□□ 1.56
SOX1-201ENST00000330949 PCDHGC3Q9UN70 934 aa24.8■■□□□ 1.56
SOX1-201ENST00000330949 TESPA1A2RU30 521 aaPredicted RBP24.8■■□□□ 1.56
SOX1-201ENST00000330949 KRBA1A5PL33 1030 aa24.8■■□□□ 1.56
SOX1-201ENST00000330949 IQCA1LA6NCM1 817 aa24.8■■□□□ 1.56
SOX1-201ENST00000330949 C9IYK1 514 aa24.8■■□□□ 1.56
SOX1-201ENST00000330949 AKAP10O43572 662 aa24.8■■□□□ 1.56
SOX1-201ENST00000330949 ALDH1A2O94788 518 aa24.8■■□□□ 1.56
SOX1-201ENST00000330949 TRUB2O95900 331 aaKnown RBP24.8■■□□□ 1.56
SOX1-201ENST00000330949 RBL1P28749 1068 aa24.8■■□□□ 1.56
SOX1-201ENST00000330949 TYK2P29597 1187 aa24.8■■□□□ 1.56
SOX1-201ENST00000330949 LIG4P49917 911 aa24.8■■□□□ 1.56
SOX1-201ENST00000330949 SLC9A4Q6AI14 798 aa24.8■■□□□ 1.56
SOX1-201ENST00000330949 ZNF534Q76KX8 674 aa24.8■■□□□ 1.56
SOX1-201ENST00000330949 PGBD4Q96DM1 585 aa24.8■■□□□ 1.56
SOX1-201ENST00000330949 ZMAT2Q96NC0 199 aaKnown RBP24.8■■□□□ 1.56
SOX1-201ENST00000330949 KPNA7A9QM74 516 aa24.79■■□□□ 1.56
SOX1-201ENST00000330949 NEMP1O14524 444 aa24.79■■□□□ 1.56
SOX1-201ENST00000330949 HDAC3O15379 428 aa24.79■■□□□ 1.56
SOX1-201ENST00000330949 H2AFYO75367 372 aaKnown RBP24.79■■□□□ 1.56
SOX1-201ENST00000330949 YBX3P16989 372 aaKnown RBP eCLIP24.79■■□□□ 1.56
SOX1-201ENST00000330949 RPL10P27635 214 aaKnown RBP24.79■■□□□ 1.56
SOX1-201ENST00000330949 SLC7A1P30825 629 aa24.79■■□□□ 1.56
SOX1-201ENST00000330949 CDH6P55285 790 aa24.79■■□□□ 1.56
SOX1-201ENST00000330949 PSMC1P62191 440 aaKnown RBP24.79■■□□□ 1.56
SOX1-201ENST00000330949 GALNT2Q10471 571 aa24.79■■□□□ 1.56
SOX1-201ENST00000330949 FAM182AQ5T1J6 154 aa24.79■■□□□ 1.56
SOX1-201ENST00000330949 TMEM26Q6ZUK4 368 aa24.79■■□□□ 1.56
SOX1-201ENST00000330949 AGR3Q8TD06 166 aa24.79■■□□□ 1.56
SOX1-201ENST00000330949 TANKQ92844 425 aa24.79■■□□□ 1.56
SOX1-201ENST00000330949 GBA3Q9H227 469 aa24.79■■□□□ 1.56
SOX1-201ENST00000330949 RIC8BQ9NVN3 520 aa24.79■■□□□ 1.56
SOX1-201ENST00000330949 AMHP03971 560 aa24.79■■□□□ 1.56
SOX1-201ENST00000330949 MYF6P23409 242 aa24.79■■□□□ 1.56
SOX1-201ENST00000330949 ACOT2P49753 483 aa24.79■■□□□ 1.56
SOX1-201ENST00000330949 CD300CQ08708 224 aa24.79■■□□□ 1.56
SOX1-201ENST00000330949 NIPAL4Q0D2K0 466 aa24.79■■□□□ 1.56
SOX1-201ENST00000330949 NAB1Q13506 487 aa24.79■■□□□ 1.56
SOX1-201ENST00000330949 MTMR1Q13613 665 aa24.79■■□□□ 1.56
SOX1-201ENST00000330949 ANKRD36BP1Q96IX9 119 aa24.79■■□□□ 1.56
SOX1-201ENST00000330949 NOL11Q9H8H0 719 aaKnown RBP24.79■■□□□ 1.56
SOX1-201ENST00000330949 ZBTB26Q9HCK0 441 aa24.79■■□□□ 1.56
SOX1-201ENST00000330949 ZNF70Q9UC06 446 aaPredicted RBP24.79■■□□□ 1.56
SOX1-201ENST00000330949 CORINQ9Y5Q5 1042 aa24.79■■□□□ 1.56
SOX1-201ENST00000330949 TPSB2P20231 275 aa24.78■■□□□ 1.56
SOX1-201ENST00000330949 HK2P52789 917 aa24.78■■□□□ 1.56
SOX1-201ENST00000330949 PRKG1Q13976 671 aa24.78■■□□□ 1.56
SOX1-201ENST00000330949 TPSAB1Q15661 275 aa24.78■■□□□ 1.56
SOX1-201ENST00000330949 SEL1L3Q68CR1 1132 aa24.78■■□□□ 1.56
SOX1-201ENST00000330949 ACDQ96AP0 544 aa24.78■■□□□ 1.56
SOX1-201ENST00000330949 VPS33BQ9H267 617 aa24.78■■□□□ 1.56
SOX1-201ENST00000330949 ZNF385DQ9H6B1 395 aa24.78■■□□□ 1.56
SOX1-201ENST00000330949 ENDOD1O94919 500 aa24.78■■□□□ 1.56
SOX1-201ENST00000330949 ADORA2AP29274 412 aa24.78■■□□□ 1.56
SOX1-201ENST00000330949 NEK2P51955 445 aa24.78■■□□□ 1.56
SOX1-201ENST00000330949 MRPS9P82933 396 aaKnown RBP24.78■■□□□ 1.56
SOX1-201ENST00000330949 PTPN20Q4JDL3 420 aa24.78■■□□□ 1.56
SOX1-201ENST00000330949 PPM1JQ5JR12 505 aa24.78■■□□□ 1.56
SOX1-201ENST00000330949 STEAP4Q687X5 459 aa24.78■■□□□ 1.56
SOX1-201ENST00000330949 NIPA1Q7RTP0 329 aa24.78■■□□□ 1.56
SOX1-201ENST00000330949 EMC1Q8N766 993 aa24.78■■□□□ 1.56
SOX1-201ENST00000330949 PPWD1Q96BP3 646 aaKnown RBP24.78■■□□□ 1.56
SOX1-201ENST00000330949 DUS3LQ96G46 650 aaKnown RBP24.78■■□□□ 1.56
SOX1-201ENST00000330949 AGO4Q9HCK5 861 aaKnown RBP24.78■■□□□ 1.56
SOX1-201ENST00000330949 AGO2Q9UKV8 859 aaKnown RBP24.78■■□□□ 1.56
SOX1-201ENST00000330949 BCLAF3A2AJT9 711 aaKnown RBP24.77■■□□□ 1.56
SOX1-201ENST00000330949 PSMD8P48556 350 aa24.77■■□□□ 1.56
SOX1-201ENST00000330949 PCYT1AP49585 367 aa24.77■■□□□ 1.56
SOX1-201ENST00000330949 NME5P56597 212 aa24.77■■□□□ 1.56
SOX1-201ENST00000330949 NFATC3Q12968 1075 aa24.77■■□□□ 1.56
SOX1-201ENST00000330949 TMEM214Q6NUQ4 689 aaKnown RBP24.77■■□□□ 1.56
SOX1-201ENST00000330949 NAPRTQ6XQN6 538 aa24.77■■□□□ 1.56
SOX1-201ENST00000330949 PTAR1Q7Z6K3 402 aaPredicted RBP24.77■■□□□ 1.56
SOX1-201ENST00000330949 COLGALT2Q8IYK4 626 aa24.77■■□□□ 1.56
SOX1-201ENST00000330949 ANKFN1Q8N957 763 aa24.77■■□□□ 1.56
SOX1-201ENST00000330949 SLC4A11Q8NBS3 891 aa24.77■■□□□ 1.56
SOX1-201ENST00000330949 ATP6V0A1Q93050 837 aa24.77■■□□□ 1.56
SOX1-201ENST00000330949 TAAR1Q96RJ0 339 aa24.77■■□□□ 1.56
SOX1-201ENST00000330949 STAU2Q9NUL3 570 aaKnown RBP eCLIP24.77■■□□□ 1.56
SOX1-201ENST00000330949 PFDN6O15212 129 aa24.77■■□□□ 1.56
SOX1-201ENST00000330949 PAX3P23760 479 aa24.77■■□□□ 1.56
SOX1-201ENST00000330949 TRAF2Q12933 501 aa24.77■■□□□ 1.56
SOX1-201ENST00000330949 TKFCQ3LXA3 575 aa24.77■■□□□ 1.56
SOX1-201ENST00000330949 ZNF394Q53GI3 561 aa24.77■■□□□ 1.56
SOX1-201ENST00000330949 PACRGLQ8N7B6 248 aa24.77■■□□□ 1.56
SOX1-201ENST00000330949 PBXIP1Q96AQ6 731 aa24.77■■□□□ 1.56
SOX1-201ENST00000330949 POLR1BQ9H9Y6 1135 aa24.77■■□□□ 1.56
SOX1-201ENST00000330949 UTP6Q9NYH9 597 aaKnown RBP24.77■■□□□ 1.56
SOX1-201ENST00000330949 CCNA2P20248 432 aa24.76■■□□□ 1.55
SOX1-201ENST00000330949 MAP4P27816 1152 aaKnown RBP24.76■■□□□ 1.55
SOX1-201ENST00000330949 KPNA1P52294 538 aaPredicted RBP24.76■■□□□ 1.55
SOX1-201ENST00000330949 NDUFA5Q16718 116 aa24.76■■□□□ 1.55
SOX1-201ENST00000330949 CHSY3Q70JA7 882 aa24.76■■□□□ 1.55
SOX1-201ENST00000330949 MFSD2AQ8NA29 543 aa24.76■■□□□ 1.55
SOX1-201ENST00000330949 PDPRQ8NCN5 879 aa24.76■■□□□ 1.55
SOX1-201ENST00000330949 CNDP2Q96KP4 475 aaKnown RBP24.76■■□□□ 1.55
SOX1-201ENST00000330949 DHRS1Q96LJ7 313 aa24.76■■□□□ 1.55
SOX1-201ENST00000330949 TRIM13O60858 407 aa24.76■■□□□ 1.55
SOX1-201ENST00000330949 IREB2P48200 963 aaKnown RBP24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms