RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 SEC14L1Q92503 715 aa10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 IRF7Q92985 503 aa10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 FATE1Q969F0 183 aa10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 EPC1Q9H2F5 836 aa10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 LINC00597Q9H2U6 94 aa10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 SPHK2Q9NRA0 654 aa10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 DUS2Q9NX74 493 aaKnown RBP10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 GRXCR2A6NFK2 248 aa10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 H0Y626 953 aa10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 MAFKO60675 156 aa10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 STK10O94804 968 aaKnown RBP10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 IFNB1P01574 187 aa10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 CCNCP24863 283 aa10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 ETFBP38117 255 aa10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 GUCY2DQ02846 1103 aa10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 SERINC3Q13530 473 aa10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 CDH18Q13634 790 aa10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 P3H1Q32P28 736 aa10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 EML3Q32P44 896 aa10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 DUPD1Q68J44 220 aa10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 TANGO2Q6ICL3 276 aa10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 TIGD7Q6NT04 549 aaPredicted RBP10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 VITQ6UXI7 678 aa10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 ARHGAP36Q6ZRI8 547 aa10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 OTOP3Q7RTS5 596 aa10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 TMEM25Q86YD3 366 aa10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 DEFB123Q8N688 67 aa10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 GLIS1Q8NBF1 620 aa10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 DEPDC1BQ8WUY9 529 aa10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 ARHGEF2Q92974 986 aaKnown RBP10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 ELSPBP1Q96BH3 223 aa10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 PNKPQ96T60 521 aa10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 GDF3Q9NR23 364 aa10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 THG1LQ9NWX6 298 aaKnown RBP10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 EPS15L1Q9UBC2 864 aa10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 ASIC3Q9UHC3 531 aa10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 IPO11Q9UI26 975 aaKnown RBP10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 C5orf60A6NFR6 353 aa10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 ZSCAN5CA6NGD5 496 aaPredicted RBP10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 GCATO75600 419 aa10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 CYP17A1P05093 508 aa10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 KCNA5P22460 613 aa10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 CLCN6P51797 869 aa10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 OXCT1P55809 520 aa10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 PDGFRLQ15198 375 aa10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 TRIP13Q15645 432 aaPredicted RBP10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 CCDC85BQ15834 202 aaPredicted RBP10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 LY6G5CQ5SRR4 150 aa10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 MFN1Q8IWA4 741 aa10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 CCDC117Q8IWD4 279 aaPredicted RBP10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 IFT20Q8IY31 132 aa10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 ZNF557Q8N988 423 aaPredicted RBP10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 OR52K2Q8NGK3 314 aa10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 ASIC4Q96FT7 647 aa10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 COL4A3Q01955 1670 aa10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 A0A0A0MRY4 1105 aa10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 RNF103O00237 685 aa10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 ECI2O75521 394 aa10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 NFATC1O95644 943 aa10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 TUBBP07437 444 aa10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 ETS1P14921 441 aa10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 TNFRSF8P28908 595 aa10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 ACVRL1P37023 503 aa10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 DRG2P55039 364 aaKnown RBP10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 IFI35P80217 286 aaPredicted RBP10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 FCHO2Q0JRZ9 810 aa10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 WASHC5Q12768 1159 aa10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 KCTD19Q17RG1 926 aaPredicted RBP10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 RNF219Q5W0B1 726 aaPredicted RBP10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 WDR93Q6P2C0 686 aa10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 C4orf22Q6V702 233 aa10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 MTSS1LQ765P7 747 aa10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 PRUNE1Q86TP1 453 aa10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 MFSD6LQ8IWD5 586 aa10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 ADGRG2Q8IZP9 1017 aa10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 OR7D4Q8NG98 312 aa10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 FIBINQ8TAL6 211 aa10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 WFDC5Q8TCV5 224 aa10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 BHMTQ93088 406 aa10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 SPATA13Q96N96 652 aa10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 BBS2Q9BXC9 721 aa10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 SP110Q9HB58 689 aa10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 EPB41L5Q9HCM4 733 aa10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 PAK5Q9P286 719 aa10.48□□□□□ -0.73
VIPAS39-201ENST00000327028 A0A0D9SEW6 157 aa10.47□□□□□ -0.73
VIPAS39-201ENST00000327028 NEDD8-MDP1E9PL57 170 aa10.47□□□□□ -0.73
VIPAS39-201ENST00000327028 MATN3O15232 486 aa10.47□□□□□ -0.73
VIPAS39-201ENST00000327028 HOXC11O43248 304 aaPredicted RBP10.47□□□□□ -0.73
VIPAS39-201ENST00000327028 MBTPS2O43462 519 aa10.47□□□□□ -0.73
VIPAS39-201ENST00000327028 PRAMEF11O60813 436 aa10.47□□□□□ -0.73
VIPAS39-201ENST00000327028 OPHN1O60890 802 aa10.47□□□□□ -0.73
VIPAS39-201ENST00000327028 ADH1CP00326 375 aa10.47□□□□□ -0.73
VIPAS39-201ENST00000327028 ZSCAN5DPP0CG00 497 aa10.47□□□□□ -0.73
VIPAS39-201ENST00000327028 MCM3P25205 808 aa10.47□□□□□ -0.73
VIPAS39-201ENST00000327028 PTPN3P26045 913 aa10.47□□□□□ -0.73
VIPAS39-201ENST00000327028 RPL22P35268 128 aaKnown RBP10.47□□□□□ -0.73
VIPAS39-201ENST00000327028 IL10RBQ08334 325 aa10.47□□□□□ -0.73
VIPAS39-201ENST00000327028 DHCR24Q15392 516 aa10.47□□□□□ -0.73
VIPAS39-201ENST00000327028 SKIV2LQ15477 1246 aaKnown RBP10.47□□□□□ -0.73
VIPAS39-201ENST00000327028 ANO4Q32M45 955 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms