RNA–Protein interactions for RNA: ENST00000325823.11

PDXDC1-201, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5 BASIC

Gene PDXDC1, Length 1,113 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-201ENST00000325823 ATCAYQ86WG3 371 aa7.65□□□□□ -1.18
PDXDC1-201ENST00000325823 ECHDC2Q86YB7 292 aa7.65□□□□□ -1.18
PDXDC1-201ENST00000325823 SPATA2LQ8IUW3 424 aaPredicted RBP7.65□□□□□ -1.18
PDXDC1-201ENST00000325823 LRRC49Q8IUZ0 686 aa7.65□□□□□ -1.18
PDXDC1-201ENST00000325823 SUGP1Q8IWZ8 645 aaKnown RBP7.65□□□□□ -1.18
PDXDC1-201ENST00000325823 ETFBKMTQ8IXQ9 262 aa7.65□□□□□ -1.18
PDXDC1-201ENST00000325823 DCP1BQ8IZD4 617 aaKnown RBP7.65□□□□□ -1.18
PDXDC1-201ENST00000325823 ZNF567Q8N184 647 aa7.65□□□□□ -1.18
PDXDC1-201ENST00000325823 ARHGAP18Q8N392 663 aa7.65□□□□□ -1.18
PDXDC1-201ENST00000325823 C3orf58Q8NDZ4 430 aa7.65□□□□□ -1.18
PDXDC1-201ENST00000325823 ZMIZ2Q8NF64 920 aa7.65□□□□□ -1.18
PDXDC1-201ENST00000325823 DEPDC1BQ8WUY9 529 aa7.65□□□□□ -1.18
PDXDC1-201ENST00000325823 NDRG1Q92597 394 aaKnown RBP7.65□□□□□ -1.18
PDXDC1-201ENST00000325823 ATP2A3Q93084 1043 aa7.65□□□□□ -1.18
PDXDC1-201ENST00000325823 HDAC11Q96DB2 347 aa7.65□□□□□ -1.18
PDXDC1-201ENST00000325823 LRRC37BQ96QE4 947 aa7.65□□□□□ -1.18
PDXDC1-201ENST00000325823 HAPLN3Q96S86 360 aa7.65□□□□□ -1.18
PDXDC1-201ENST00000325823 LGMNQ99538 433 aa7.65□□□□□ -1.18
PDXDC1-201ENST00000325823 FTHL17Q9BXU8 183 aa7.65□□□□□ -1.18
PDXDC1-201ENST00000325823 TRIM55Q9BYV6 548 aa7.65□□□□□ -1.18
PDXDC1-201ENST00000325823 LRRC40Q9H9A6 602 aa7.65□□□□□ -1.18
PDXDC1-201ENST00000325823 SAR1AQ9NR31 198 aa7.65□□□□□ -1.18
PDXDC1-201ENST00000325823 RGS18Q9NS28 235 aa7.65□□□□□ -1.18
PDXDC1-201ENST00000325823 KLC4Q9NSK0 619 aa7.65□□□□□ -1.18
PDXDC1-201ENST00000325823 DONSONQ9NYP3 566 aa7.65□□□□□ -1.18
PDXDC1-201ENST00000325823 BFARQ9NZS9 450 aa7.65□□□□□ -1.18
PDXDC1-201ENST00000325823 COX16Q9P0S2 106 aa7.65□□□□□ -1.18
PDXDC1-201ENST00000325823 FNIP2Q9P278 1114 aa7.65□□□□□ -1.18
PDXDC1-201ENST00000325823 KLHL8Q9P2G9 620 aaPredicted RBP7.65□□□□□ -1.18
PDXDC1-201ENST00000325823 GABRQQ9UN88 632 aa7.65□□□□□ -1.18
PDXDC1-201ENST00000325823 ZNF232Q9UNY5 417 aa7.65□□□□□ -1.18
PDXDC1-201ENST00000325823 TMA7Q9Y2S6 64 aaKnown RBP7.65□□□□□ -1.18
PDXDC1-201ENST00000325823 TIMM13Q9Y5L4 95 aaPredicted RBP7.65□□□□□ -1.18
PDXDC1-201ENST00000325823 HRH3Q9Y5N1 445 aa7.65□□□□□ -1.18
PDXDC1-201ENST00000325823 CASP8AP2Q9UKL3 1982 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 TSC2P49815 1807 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 COL4A4P53420 1690 aaPredicted RBP7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 RNF223E7ERA6 249 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 I3L4J1 428 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 FGF10O15520 208 aaPredicted RBP7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 MGEA5O60502 916 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 AP2A1O95782 977 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 POMCP01189 267 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 IGLV3-25P01717 112 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 SRGAP2BP0DMP2 458 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 SLC2A3P11169 496 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 BDNFP23560 247 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 CCNCP24863 283 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 PTPN3P26045 913 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 HNRNPH1P31943 449 aaKnown RBP7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 HADHAP40939 763 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 ETV4P43268 484 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 PTPN5P54829 565 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 FAM189BP81408 668 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 NRG1Q02297 640 aaPredicted RBP7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 SP3Q02447 781 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 MGAT5Q09328 741 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 NOGQ13253 232 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 CLN3Q13286 438 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 MTA1Q13330 715 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 RIPK1Q13546 671 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 NFE2Q16621 373 aaPredicted RBP7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 INSCQ1MX18 579 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 GRTP1Q5TC63 336 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 BTBD8Q5XKL5 378 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 CASC4Q6P4E1 433 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 KYAT3Q6YP21 454 aaKnown RBP7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 SLC24A5Q71RS6 500 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 LINC00523Q86TU6 105 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 AGGF1Q8N302 714 aaeCLIP7.64□□□□□ -1.197e-7■□□□□ 9.1
PDXDC1-201ENST00000325823 RNF169Q8NCN4 708 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 MAGEC3Q8TD91 643 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 FUBP3Q96I24 572 aaKnown RBP eCLIP7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 SERAC1Q96JX3 654 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 GLT1D1Q96MS3 346 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 TSGA13Q96PP4 275 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 RAB3IPQ96QF0 476 aaPredicted RBP7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 SRPK1Q96SB4 655 aaKnown RBP7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 KCNK16Q96T55 309 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 PKMYT1Q99640 499 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 RTP3Q9BQQ7 232 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 TSSK1BQ9BXA7 367 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 MAGEB5Q9BZ81 275 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 TKTL2Q9H0I9 626 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 GBA3Q9H227 469 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 CATSPERBQ9H7T0 1116 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 ECT2Q9H8V3 914 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 ABCF3Q9NUQ8 709 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 ARHGEF38Q9NXL2 777 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 NSMCE4AQ9NXX6 385 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 SEPT10Q9P0V9 454 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 TXNDC16Q9P2K2 825 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 OR12D3Q9UGF7 316 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 DCDC2Q9UHG0 476 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 ADAM28Q9UKQ2 775 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 GRID1Q9ULK0 1009 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 ABT1Q9ULW3 272 aaKnown RBP7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 MTO1Q9Y2Z2 717 aaKnown RBP7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 PLLPQ9Y342 182 aa7.64□□□□□ -1.19
PDXDC1-201ENST00000325823 DOCK3Q8IZD9 2030 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms