RNA–Protein interactions for RNA: ENST00000325617.9

CLGN-201, Transcript of calmegin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLGN, Length 3,043 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-201ENST00000325617 USP17L7P0C7H9 530 aa13.39□□□□□ -0.27
CLGN-201ENST00000325617 CD68P34810 354 aaPredicted RBP13.39□□□□□ -0.27
CLGN-201ENST00000325617 SOX11P35716 441 aa13.39□□□□□ -0.27
CLGN-201ENST00000325617 THOP1P52888 689 aa13.39□□□□□ -0.27
CLGN-201ENST00000325617 MS4A2Q01362 244 aa13.39□□□□□ -0.27
CLGN-201ENST00000325617 DEUP1Q05D60 604 aa13.39□□□□□ -0.27
CLGN-201ENST00000325617 C11orf91Q3C1V1 193 aa13.39□□□□□ -0.27
CLGN-201ENST00000325617 FBXO47Q5MNV8 452 aa13.39□□□□□ -0.27
CLGN-201ENST00000325617 ARCQ7LC44 396 aa13.39□□□□□ -0.27
CLGN-201ENST00000325617 PDSS2Q86YH6 399 aa13.39□□□□□ -0.27
CLGN-201ENST00000325617 RCN3Q96D15 328 aa13.39□□□□□ -0.27
CLGN-201ENST00000325617 COPS7BQ9H9Q2 264 aaPredicted RBP13.39□□□□□ -0.27
CLGN-201ENST00000325617 ZDHHC2Q9UIJ5 367 aa13.39□□□□□ -0.27
CLGN-201ENST00000325617 VANGL2Q9ULK5 521 aa13.39□□□□□ -0.27
CLGN-201ENST00000325617 SMIM28A0A1B0GU29 152 aa13.39□□□□□ -0.27
CLGN-201ENST00000325617 AHCYL1O43865 530 aa13.39□□□□□ -0.27
CLGN-201ENST00000325617 ALDH1A2O94788 518 aa13.39□□□□□ -0.27
CLGN-201ENST00000325617 PIGNO95427 931 aa13.39□□□□□ -0.27
CLGN-201ENST00000325617 VCLP18206 1134 aa13.39□□□□□ -0.27
CLGN-201ENST00000325617 PTPN3P26045 913 aa13.39□□□□□ -0.27
CLGN-201ENST00000325617 CRABP2P29373 138 aa13.39□□□□□ -0.27
CLGN-201ENST00000325617 GP5P40197 560 aa13.39□□□□□ -0.27
CLGN-201ENST00000325617 DPP6P42658 865 aa13.39□□□□□ -0.27
CLGN-201ENST00000325617 CXCR3P49682 368 aa13.39□□□□□ -0.27
CLGN-201ENST00000325617 RAB27AP51159 221 aa13.39□□□□□ -0.27
CLGN-201ENST00000325617 PLK1P53350 603 aa13.39□□□□□ -0.27
CLGN-201ENST00000325617 POU6F1Q14863 301 aa13.39□□□□□ -0.27
CLGN-201ENST00000325617 SLC41A1Q8IVJ1 513 aa13.39□□□□□ -0.27
CLGN-201ENST00000325617 URGCPQ8TCY9 931 aa13.39□□□□□ -0.27
CLGN-201ENST00000325617 DNAJB3Q8WWF6 145 aa13.39□□□□□ -0.27
CLGN-201ENST00000325617 CENPIQ92674 756 aaPredicted RBP13.39□□□□□ -0.27
CLGN-201ENST00000325617 OPTNQ96CV9 577 aa13.39□□□□□ -0.27
CLGN-201ENST00000325617 TMA16Q96EY4 203 aaKnown RBP13.39□□□□□ -0.27
CLGN-201ENST00000325617 SLC45A3Q96JT2 553 aa13.39□□□□□ -0.27
CLGN-201ENST00000325617 PHF12Q96QT6 1004 aa13.39□□□□□ -0.27
CLGN-201ENST00000325617 NPAS2Q99743 824 aa13.39□□□□□ -0.27
CLGN-201ENST00000325617 MLPHQ9BV36 600 aaPredicted RBP13.39□□□□□ -0.27
CLGN-201ENST00000325617 CYP4F12Q9HCS2 524 aa13.39□□□□□ -0.27
CLGN-201ENST00000325617 DCDC2Q9UHG0 476 aa13.39□□□□□ -0.27
CLGN-201ENST00000325617 H3BNX3 289 aa13.38□□□□□ -0.27
CLGN-201ENST00000325617 CCL22O00626 93 aa13.38□□□□□ -0.27
CLGN-201ENST00000325617 KIF3CO14782 793 aa13.38□□□□□ -0.27
CLGN-201ENST00000325617 AURKAO14965 403 aa13.38□□□□□ -0.27
CLGN-201ENST00000325617 MATKP42679 507 aa13.38□□□□□ -0.27
CLGN-201ENST00000325617 PTPN9P43378 593 aa13.38□□□□□ -0.27
CLGN-201ENST00000325617 MPP1Q00013 466 aa13.38□□□□□ -0.27
CLGN-201ENST00000325617 LSM12Q3MHD2 195 aaKnown RBP13.38□□□□□ -0.27
CLGN-201ENST00000325617 TMCO4Q5TGY1 634 aa13.38□□□□□ -0.27
CLGN-201ENST00000325617 FAM91A1Q658Y4 838 aa13.38□□□□□ -0.27
CLGN-201ENST00000325617 STEAP4Q687X5 459 aa13.38□□□□□ -0.27
CLGN-201ENST00000325617 LAYNQ6UX15 382 aa13.38□□□□□ -0.27
CLGN-201ENST00000325617 ITFG2Q969R8 447 aa13.38□□□□□ -0.27
CLGN-201ENST00000325617 ULBP1Q9BZM6 244 aa13.38□□□□□ -0.27
CLGN-201ENST00000325617 PDE4DIPQ5VU43 2346 aa13.38□□□□□ -0.27
CLGN-201ENST00000325617 CROCCQ5TZA2 2017 aa13.38□□□□□ -0.27
CLGN-201ENST00000325617 CCDC160A6NGH7 325 aa13.38□□□□□ -0.27
CLGN-201ENST00000325617 KLHL2O95198 593 aa13.38□□□□□ -0.27
CLGN-201ENST00000325617 HNRNPLP14866 589 aaKnown RBP eCLIP13.38□□□□□ -0.27
CLGN-201ENST00000325617 FGFR3P22607 806 aa13.38□□□□□ -0.27
CLGN-201ENST00000325617 TKTL1P51854 596 aa13.38□□□□□ -0.27
CLGN-201ENST00000325617 BCAT1P54687 386 aa13.38□□□□□ -0.27
CLGN-201ENST00000325617 MED21Q13503 144 aa13.38□□□□□ -0.27
CLGN-201ENST00000325617 ANKRD20A4Q4UJ75 823 aa13.38□□□□□ -0.27
CLGN-201ENST00000325617 CMPK2Q5EBM0 449 aa13.38□□□□□ -0.27
CLGN-201ENST00000325617 ARL13AQ5H913 290 aaPredicted RBP13.38□□□□□ -0.27
CLGN-201ENST00000325617 ZNF484Q5JVG2 852 aa13.38□□□□□ -0.27
CLGN-201ENST00000325617 NOL9Q5SY16 702 aaKnown RBP13.38□□□□□ -0.27
CLGN-201ENST00000325617 AP1ARQ63HQ0 302 aa13.38□□□□□ -0.27
CLGN-201ENST00000325617 TIFABQ6ZNK6 161 aa13.38□□□□□ -0.27
CLGN-201ENST00000325617 PAQR9Q6ZVX9 377 aa13.38□□□□□ -0.27
CLGN-201ENST00000325617 SDCCAG8Q86SQ7 713 aaPredicted RBP13.38□□□□□ -0.27
CLGN-201ENST00000325617 PCDH20Q8N6Y1 951 aaKnown RBP13.38□□□□□ -0.27
CLGN-201ENST00000325617 PIP4K2CQ8TBX8 421 aa13.38□□□□□ -0.27
CLGN-201ENST00000325617 SNX27Q96L92 541 aa13.38□□□□□ -0.27
CLGN-201ENST00000325617 CNBD2Q96M20 576 aa13.38□□□□□ -0.27
CLGN-201ENST00000325617 SH3GL3Q99963 347 aa13.38□□□□□ -0.27
CLGN-201ENST00000325617 SEMA6AQ9H2E6 1030 aa13.38□□□□□ -0.27
CLGN-201ENST00000325617 LRRC4Q9HBW1 653 aa13.38□□□□□ -0.27
CLGN-201ENST00000325617 SLC2A6Q9UGQ3 507 aa13.38□□□□□ -0.27
CLGN-201ENST00000325617 WDR90Q96KV7 1748 aa13.38□□□□□ -0.27
CLGN-201ENST00000325617 A0A0G2JLL6 359 aaPredicted RBP13.37□□□□□ -0.27
CLGN-201ENST00000325617 ZCWPW2A0A1B0GU75 182 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 TTC24A2A3L6 582 aaPredicted RBP13.37□□□□□ -0.27
CLGN-201ENST00000325617 C9IYK1 514 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 SNUPNO95149 360 aaKnown RBP13.37□□□□□ -0.27
CLGN-201ENST00000325617 FYNP06241 537 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 GRM5P41594 1212 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 GJA9P57773 515 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 FOLH1Q04609 750 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 TLR1Q15399 786 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 PGM2L1Q6PCE3 622 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 PRRT2Q7Z6L0 340 aaPredicted RBP13.37□□□□□ -0.27
CLGN-201ENST00000325617 GALNT15Q8N3T1 639 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 LINC01465Q8N7H1 131 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 BEST2Q8NFU1 509 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 FRMD8Q9BZ67 464 aaPredicted RBP13.37□□□□□ -0.27
CLGN-201ENST00000325617 KLHL4Q9C0H6 718 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 CDH19Q9H159 772 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 NMRAL1Q9HBL8 299 aa13.37□□□□□ -0.27
CLGN-201ENST00000325617 TCF7L2Q9NQB0 619 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms